Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_10030 and AO353_10035 are separated by 189 nucleotides AO353_10035 and AO353_10040 are separated by 384 nucleotides
AO353_10030: AO353_10030 - pyruvate carboxylase subunit A, at 2,194,943 to 2,196,358
_10030
AO353_10035: AO353_10035 - LysR family transcriptional regulator, at 2,196,548 to 2,197,510
_10035
AO353_10040: AO353_10040 - transcriptional regulator, at 2,197,895 to 2,198,761
_10040
Position (kb)
2196
2197
2198 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2195.601 kb on + strand, within AO353_10030 at 2195.601 kb on + strand, within AO353_10030 at 2195.601 kb on + strand, within AO353_10030 at 2195.601 kb on + strand, within AO353_10030 at 2195.601 kb on + strand, within AO353_10030 at 2195.601 kb on + strand, within AO353_10030 at 2195.601 kb on + strand, within AO353_10030 at 2195.601 kb on + strand, within AO353_10030 at 2195.601 kb on + strand, within AO353_10030 at 2195.601 kb on + strand, within AO353_10030 at 2195.601 kb on + strand, within AO353_10030 at 2195.602 kb on - strand, within AO353_10030 at 2195.602 kb on - strand, within AO353_10030 at 2195.602 kb on - strand, within AO353_10030 at 2195.602 kb on - strand, within AO353_10030 at 2195.602 kb on - strand, within AO353_10030 at 2195.602 kb on - strand, within AO353_10030 at 2195.602 kb on - strand, within AO353_10030 at 2195.602 kb on - strand, within AO353_10030 at 2195.660 kb on - strand, within AO353_10030 at 2196.082 kb on + strand, within AO353_10030 at 2196.118 kb on - strand, within AO353_10030 at 2196.264 kb on + strand at 2196.264 kb on + strand at 2196.264 kb on + strand at 2196.264 kb on + strand at 2196.264 kb on + strand at 2196.265 kb on - strand at 2196.305 kb on + strand at 2196.305 kb on + strand at 2196.305 kb on + strand at 2196.305 kb on + strand at 2196.305 kb on + strand at 2196.305 kb on + strand at 2196.305 kb on + strand at 2196.305 kb on + strand at 2196.306 kb on - strand at 2196.306 kb on - strand at 2196.306 kb on - strand at 2196.306 kb on - strand at 2196.315 kb on - strand at 2196.354 kb on - strand at 2196.354 kb on - strand at 2196.417 kb on + strand at 2196.417 kb on + strand at 2196.418 kb on - strand at 2196.501 kb on - strand at 2196.511 kb on - strand at 2196.543 kb on - strand at 2196.613 kb on - strand at 2196.613 kb on - strand at 2196.613 kb on - strand at 2196.620 kb on + strand at 2196.620 kb on + strand at 2196.621 kb on - strand at 2196.621 kb on - strand at 2196.621 kb on - strand at 2196.621 kb on - strand at 2196.621 kb on - strand at 2196.670 kb on - strand, within AO353_10035 at 2196.716 kb on + strand, within AO353_10035 at 2196.716 kb on + strand, within AO353_10035 at 2196.716 kb on + strand, within AO353_10035 at 2196.716 kb on + strand, within AO353_10035 at 2196.717 kb on - strand, within AO353_10035 at 2196.717 kb on - strand, within AO353_10035 at 2196.734 kb on + strand, within AO353_10035 at 2196.734 kb on + strand, within AO353_10035 at 2196.734 kb on + strand, within AO353_10035 at 2196.734 kb on + strand, within AO353_10035 at 2196.735 kb on - strand, within AO353_10035 at 2196.735 kb on - strand, within AO353_10035 at 2196.735 kb on - strand, within AO353_10035 at 2196.735 kb on - strand, within AO353_10035 at 2196.759 kb on + strand, within AO353_10035 at 2196.875 kb on + strand, within AO353_10035 at 2196.875 kb on + strand, within AO353_10035 at 2196.875 kb on + strand, within AO353_10035 at 2196.876 kb on - strand, within AO353_10035 at 2196.876 kb on - strand, within AO353_10035 at 2196.876 kb on - strand, within AO353_10035 at 2196.876 kb on - strand, within AO353_10035 at 2196.876 kb on - strand, within AO353_10035 at 2196.876 kb on - strand, within AO353_10035 at 2196.876 kb on - strand, within AO353_10035 at 2196.876 kb on - strand, within AO353_10035 at 2197.130 kb on + strand, within AO353_10035 at 2197.130 kb on + strand, within AO353_10035 at 2197.130 kb on + strand, within AO353_10035 at 2197.130 kb on + strand, within AO353_10035 at 2197.131 kb on - strand, within AO353_10035 at 2197.131 kb on - strand, within AO353_10035 at 2197.131 kb on - strand, within AO353_10035 at 2197.131 kb on - strand, within AO353_10035 at 2197.184 kb on + strand, within AO353_10035 at 2197.184 kb on + strand, within AO353_10035 at 2197.184 kb on + strand at 2197.185 kb on - strand, within AO353_10035 at 2197.185 kb on - strand, within AO353_10035 at 2197.185 kb on - strand, within AO353_10035 at 2197.185 kb on - strand, within AO353_10035 at 2197.260 kb on + strand, within AO353_10035 at 2197.282 kb on - strand, within AO353_10035 at 2197.358 kb on + strand, within AO353_10035 at 2197.359 kb on - strand, within AO353_10035 at 2197.359 kb on - strand, within AO353_10035 at 2197.504 kb on + strand at 2197.504 kb on + strand at 2197.504 kb on + strand at 2197.504 kb on + strand at 2197.504 kb on + strand at 2197.504 kb on + strand at 2197.504 kb on + strand at 2197.504 kb on + strand at 2197.505 kb on - strand at 2197.505 kb on - strand at 2197.505 kb on - strand at 2197.505 kb on - strand at 2197.505 kb on - strand at 2197.505 kb on - strand at 2197.505 kb on - strand at 2197.505 kb on - strand at 2197.505 kb on - strand at 2197.648 kb on + strand at 2197.649 kb on - strand at 2197.698 kb on + strand at 2197.698 kb on + strand at 2197.698 kb on + strand at 2197.698 kb on + strand at 2197.698 kb on + strand at 2197.698 kb on + strand at 2197.699 kb on - strand at 2197.734 kb on + strand at 2197.735 kb on - strand at 2197.735 kb on - strand at 2197.735 kb on - strand at 2197.885 kb on + strand at 2197.913 kb on + strand at 2197.913 kb on + strand at 2197.914 kb on - strand at 2198.059 kb on + strand, within AO353_10040 at 2198.059 kb on + strand, within AO353_10040 at 2198.060 kb on - strand, within AO353_10040 at 2198.060 kb on - strand, within AO353_10040 at 2198.060 kb on - strand, within AO353_10040 at 2198.060 kb on - strand, within AO353_10040 at 2198.060 kb on - strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.061 kb on + strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.062 kb on - strand, within AO353_10040 at 2198.317 kb on + strand, within AO353_10040 at 2198.317 kb on + strand, within AO353_10040 at 2198.318 kb on - strand, within AO353_10040 at 2198.318 kb on - strand, within AO353_10040 at 2198.361 kb on + strand, within AO353_10040 at 2198.361 kb on + strand, within AO353_10040 at 2198.362 kb on - strand, within AO353_10040 at 2198.362 kb on - strand, within AO353_10040 at 2198.362 kb on - strand, within AO353_10040 at 2198.362 kb on - strand, within AO353_10040 at 2198.481 kb on + strand, within AO353_10040 at 2198.481 kb on + strand, within AO353_10040 at 2198.481 kb on + strand, within AO353_10040
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 2,195,601 + AO353_10030 0.46 -0.5 2,195,601 + AO353_10030 0.46 -1.1 2,195,601 + AO353_10030 0.46 -1.0 2,195,601 + AO353_10030 0.46 +0.7 2,195,601 + AO353_10030 0.46 +0.3 2,195,601 + AO353_10030 0.46 -2.5 2,195,601 + AO353_10030 0.46 -0.7 2,195,601 + AO353_10030 0.46 -1.1 2,195,601 + AO353_10030 0.46 -0.1 2,195,601 + AO353_10030 0.46 -1.2 2,195,601 + AO353_10030 0.46 -0.6 2,195,602 - AO353_10030 0.47 -0.3 2,195,602 - AO353_10030 0.47 -1.5 2,195,602 - AO353_10030 0.47 -0.3 2,195,602 - AO353_10030 0.47 -0.7 2,195,602 - AO353_10030 0.47 -1.0 2,195,602 - AO353_10030 0.47 -0.3 2,195,602 - AO353_10030 0.47 +0.6 2,195,602 - AO353_10030 0.47 -0.8 2,195,660 - AO353_10030 0.51 -1.5 2,196,082 + AO353_10030 0.80 +1.9 2,196,118 - AO353_10030 0.83 -1.4 2,196,264 + -2.5 2,196,264 + -0.8 2,196,264 + -3.2 2,196,264 + -1.9 2,196,264 + -0.5 2,196,265 - -1.0 2,196,305 + -1.5 2,196,305 + +0.3 2,196,305 + -1.0 2,196,305 + +1.0 2,196,305 + -0.5 2,196,305 + -1.8 2,196,305 + -0.1 2,196,305 + -1.5 2,196,306 - +0.5 2,196,306 - +1.9 2,196,306 - -1.0 2,196,306 - -0.5 2,196,315 - -0.7 2,196,354 - -1.7 2,196,354 - -1.7 2,196,417 + -1.1 2,196,417 + -1.8 2,196,418 - -1.3 2,196,501 - -0.7 2,196,511 - -2.1 2,196,543 - -2.8 2,196,613 - -1.9 2,196,613 - -0.5 2,196,613 - +0.0 2,196,620 + -1.9 2,196,620 + +0.7 2,196,621 - -1.4 2,196,621 - -1.1 2,196,621 - -1.8 2,196,621 - +0.9 2,196,621 - -0.6 2,196,670 - AO353_10035 0.13 +0.5 2,196,716 + AO353_10035 0.17 -0.6 2,196,716 + AO353_10035 0.17 -1.5 2,196,716 + AO353_10035 0.17 +0.0 2,196,716 + AO353_10035 0.17 +1.3 2,196,717 - AO353_10035 0.18 -2.0 2,196,717 - AO353_10035 0.18 -0.5 2,196,734 + AO353_10035 0.19 +0.4 2,196,734 + AO353_10035 0.19 -0.8 2,196,734 + AO353_10035 0.19 -0.8 2,196,734 + AO353_10035 0.19 -1.8 2,196,735 - AO353_10035 0.19 -1.8 2,196,735 - AO353_10035 0.19 -0.7 2,196,735 - AO353_10035 0.19 -0.5 2,196,735 - AO353_10035 0.19 +0.5 2,196,759 + AO353_10035 0.22 -1.5 2,196,875 + AO353_10035 0.34 -1.2 2,196,875 + AO353_10035 0.34 -1.7 2,196,875 + AO353_10035 0.34 -0.3 2,196,876 - AO353_10035 0.34 -2.7 2,196,876 - AO353_10035 0.34 -1.7 2,196,876 - AO353_10035 0.34 -1.5 2,196,876 - AO353_10035 0.34 +0.3 2,196,876 - AO353_10035 0.34 -2.5 2,196,876 - AO353_10035 0.34 -0.6 2,196,876 - AO353_10035 0.34 -2.5 2,196,876 - AO353_10035 0.34 -3.3 2,197,130 + AO353_10035 0.60 -1.6 2,197,130 + AO353_10035 0.60 -1.0 2,197,130 + AO353_10035 0.60 -2.1 2,197,130 + AO353_10035 0.60 -0.1 2,197,131 - AO353_10035 0.61 -1.3 2,197,131 - AO353_10035 0.61 -1.3 2,197,131 - AO353_10035 0.61 -0.9 2,197,131 - AO353_10035 0.61 -2.8 2,197,184 + AO353_10035 0.66 +0.0 2,197,184 + AO353_10035 0.66 -1.7 2,197,184 + +1.9 2,197,185 - AO353_10035 0.66 -1.1 2,197,185 - AO353_10035 0.66 -0.8 2,197,185 - AO353_10035 0.66 -1.1 2,197,185 - AO353_10035 0.66 -1.0 2,197,260 + AO353_10035 0.74 -1.4 2,197,282 - AO353_10035 0.76 -1.4 2,197,358 + AO353_10035 0.84 -0.1 2,197,359 - AO353_10035 0.84 -2.0 2,197,359 - AO353_10035 0.84 -1.6 2,197,504 + +0.2 2,197,504 + +0.7 2,197,504 + -0.7 2,197,504 + -0.5 2,197,504 + -0.8 2,197,504 + +1.0 2,197,504 + +0.8 2,197,504 + -0.2 2,197,505 - +0.4 2,197,505 - -0.0 2,197,505 - +0.1 2,197,505 - +0.9 2,197,505 - -1.2 2,197,505 - -1.0 2,197,505 - -0.8 2,197,505 - -0.3 2,197,505 - -1.1 2,197,648 + -2.0 2,197,649 - -1.0 2,197,698 + -0.5 2,197,698 + -1.5 2,197,698 + -0.6 2,197,698 + +0.0 2,197,698 + -0.8 2,197,698 + -1.9 2,197,699 - -0.1 2,197,734 + +0.9 2,197,735 - -1.5 2,197,735 - +0.5 2,197,735 - -1.7 2,197,885 + +0.5 2,197,913 + -1.1 2,197,913 + -0.5 2,197,914 - -1.4 2,198,059 + AO353_10040 0.19 -0.3 2,198,059 + AO353_10040 0.19 +0.3 2,198,060 - AO353_10040 0.19 +0.0 2,198,060 - AO353_10040 0.19 -0.3 2,198,060 - AO353_10040 0.19 +0.0 2,198,060 - AO353_10040 0.19 -0.7 2,198,060 - AO353_10040 0.19 -0.5 2,198,061 + AO353_10040 0.19 +0.9 2,198,061 + AO353_10040 0.19 -0.7 2,198,061 + AO353_10040 0.19 -0.3 2,198,061 + AO353_10040 0.19 +1.3 2,198,061 + AO353_10040 0.19 -1.0 2,198,061 + AO353_10040 0.19 +0.9 2,198,061 + AO353_10040 0.19 +0.3 2,198,061 + AO353_10040 0.19 +0.2 2,198,061 + AO353_10040 0.19 +0.9 2,198,061 + AO353_10040 0.19 -1.1 2,198,061 + AO353_10040 0.19 +0.3 2,198,061 + AO353_10040 0.19 +0.4 2,198,061 + AO353_10040 0.19 +0.1 2,198,061 + AO353_10040 0.19 -0.5 2,198,061 + AO353_10040 0.19 +0.3 2,198,061 + AO353_10040 0.19 +0.4 2,198,061 + AO353_10040 0.19 -0.1 2,198,061 + AO353_10040 0.19 +0.9 2,198,061 + AO353_10040 0.19 +0.3 2,198,061 + AO353_10040 0.19 -1.3 2,198,061 + AO353_10040 0.19 -0.8 2,198,061 + AO353_10040 0.19 -0.1 2,198,062 - AO353_10040 0.19 -0.5 2,198,062 - AO353_10040 0.19 -0.6 2,198,062 - AO353_10040 0.19 +0.0 2,198,062 - AO353_10040 0.19 +0.3 2,198,062 - AO353_10040 0.19 -1.7 2,198,062 - AO353_10040 0.19 -0.6 2,198,062 - AO353_10040 0.19 -0.4 2,198,062 - AO353_10040 0.19 -0.5 2,198,062 - AO353_10040 0.19 -0.5 2,198,062 - AO353_10040 0.19 -1.1 2,198,062 - AO353_10040 0.19 -0.1 2,198,062 - AO353_10040 0.19 -0.7 2,198,062 - AO353_10040 0.19 +0.4 2,198,062 - AO353_10040 0.19 +0.0 2,198,062 - AO353_10040 0.19 +2.9 2,198,062 - AO353_10040 0.19 +0.7 2,198,062 - AO353_10040 0.19 -1.2 2,198,062 - AO353_10040 0.19 -0.3 2,198,062 - AO353_10040 0.19 -0.4 2,198,062 - AO353_10040 0.19 +0.3 2,198,062 - AO353_10040 0.19 -0.5 2,198,062 - AO353_10040 0.19 -1.0 2,198,062 - AO353_10040 0.19 +0.5 2,198,062 - AO353_10040 0.19 +2.9 2,198,317 + AO353_10040 0.49 +1.9 2,198,317 + AO353_10040 0.49 +0.6 2,198,318 - AO353_10040 0.49 +2.4 2,198,318 - AO353_10040 0.49 -0.3 2,198,361 + AO353_10040 0.54 -0.7 2,198,361 + AO353_10040 0.54 -0.6 2,198,362 - AO353_10040 0.54 -0.3 2,198,362 - AO353_10040 0.54 -1.0 2,198,362 - AO353_10040 0.54 -1.8 2,198,362 - AO353_10040 0.54 +0.0 2,198,481 + AO353_10040 0.68 +0.7 2,198,481 + AO353_10040 0.68 -0.6 2,198,481 + AO353_10040 0.68 +0.0
Or see this region's nucleotide sequence