Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_09305

Experiment: L-Serine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_09300 and AO353_09305 are separated by 6 nucleotidesAO353_09305 and AO353_09310 overlap by 4 nucleotides AO353_09300: AO353_09300 - biopolymer transporter ExbB, at 2,038,857 to 2,039,852 _09300 AO353_09305: AO353_09305 - protein TolR, at 2,039,859 to 2,040,287 _09305 AO353_09310: AO353_09310 - energy transducer TonB, at 2,040,284 to 2,041,033 _09310 Position (kb) 2039 2040 2041Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2039.845 kb on + strandat 2039.845 kb on + strandat 2039.845 kb on + strandat 2039.845 kb on + strandat 2039.845 kb on + strandat 2041.031 kb on + strandat 2041.031 kb on + strandat 2041.031 kb on + strandat 2041.031 kb on + strandat 2041.031 kb on + strandat 2041.031 kb on + strandat 2041.031 kb on + strandat 2041.031 kb on + strandat 2041.032 kb on - strandat 2041.032 kb on - strandat 2041.032 kb on - strandat 2041.032 kb on - strandat 2041.054 kb on + strandat 2041.054 kb on + strandat 2041.054 kb on + strandat 2041.055 kb on - strandat 2041.055 kb on - strandat 2041.055 kb on - strandat 2041.055 kb on - strandat 2041.055 kb on - strandat 2041.055 kb on - strandat 2041.055 kb on - strandat 2041.055 kb on - strandat 2041.055 kb on - strandat 2041.140 kb on + strandat 2041.140 kb on + strandat 2041.140 kb on + strandat 2041.140 kb on + strandat 2041.140 kb on + strandat 2041.141 kb on - strandat 2041.141 kb on - strandat 2041.141 kb on - strandat 2041.252 kb on + strandat 2041.279 kb on + strandat 2041.280 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (C)
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2,039,845 + +1.8
2,039,845 + -0.7
2,039,845 + -0.0
2,039,845 + -0.1
2,039,845 + -0.0
2,041,031 + -0.2
2,041,031 + -0.3
2,041,031 + +0.4
2,041,031 + +1.6
2,041,031 + +0.8
2,041,031 + +0.6
2,041,031 + -2.0
2,041,031 + +0.9
2,041,032 - -0.1
2,041,032 - +0.2
2,041,032 - -0.8
2,041,032 - +0.1
2,041,054 + -0.3
2,041,054 + -0.5
2,041,054 + +1.0
2,041,055 - -0.4
2,041,055 - +0.5
2,041,055 - -0.8
2,041,055 - -1.2
2,041,055 - +1.1
2,041,055 - +0.5
2,041,055 - -0.7
2,041,055 - +3.4
2,041,055 - +0.1
2,041,140 + -0.1
2,041,140 + -1.0
2,041,140 + -1.5
2,041,140 + -1.5
2,041,140 + +1.0
2,041,141 - -0.0
2,041,141 - +0.5
2,041,141 - +0.5
2,041,252 + -0.7
2,041,279 + -0.1
2,041,280 - +1.5

Or see this region's nucleotide sequence