Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_09295 and AO353_09300 are separated by 189 nucleotides AO353_09300 and AO353_09305 are separated by 6 nucleotides AO353_09305 and AO353_09310 overlap by 4 nucleotides
AO353_09295: AO353_09295 - oxidoreductase, at 2,037,810 to 2,038,667
_09295
AO353_09300: AO353_09300 - biopolymer transporter ExbB, at 2,038,857 to 2,039,852
_09300
AO353_09305: AO353_09305 - protein TolR, at 2,039,859 to 2,040,287
_09305
AO353_09310: AO353_09310 - energy transducer TonB, at 2,040,284 to 2,041,033
_09310
Position (kb)
2038
2039
2040 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2037.962 kb on - strand, within AO353_09295 at 2038.021 kb on + strand, within AO353_09295 at 2038.021 kb on + strand, within AO353_09295 at 2038.021 kb on + strand, within AO353_09295 at 2038.021 kb on + strand, within AO353_09295 at 2038.021 kb on + strand, within AO353_09295 at 2038.021 kb on + strand, within AO353_09295 at 2038.021 kb on + strand, within AO353_09295 at 2038.021 kb on + strand, within AO353_09295 at 2038.021 kb on + strand, within AO353_09295 at 2038.021 kb on + strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.022 kb on - strand, within AO353_09295 at 2038.111 kb on + strand, within AO353_09295 at 2038.111 kb on + strand, within AO353_09295 at 2038.111 kb on + strand, within AO353_09295 at 2038.112 kb on - strand, within AO353_09295 at 2038.112 kb on - strand, within AO353_09295 at 2038.112 kb on - strand, within AO353_09295 at 2038.112 kb on - strand, within AO353_09295 at 2038.138 kb on + strand, within AO353_09295 at 2038.183 kb on + strand, within AO353_09295 at 2038.183 kb on + strand, within AO353_09295 at 2038.183 kb on + strand, within AO353_09295 at 2038.227 kb on + strand, within AO353_09295 at 2038.227 kb on + strand, within AO353_09295 at 2038.228 kb on - strand, within AO353_09295 at 2038.324 kb on + strand, within AO353_09295 at 2038.324 kb on + strand, within AO353_09295 at 2038.324 kb on + strand, within AO353_09295 at 2038.373 kb on - strand, within AO353_09295 at 2038.414 kb on + strand, within AO353_09295 at 2038.414 kb on + strand, within AO353_09295 at 2038.414 kb on + strand, within AO353_09295 at 2038.414 kb on + strand, within AO353_09295 at 2038.414 kb on + strand, within AO353_09295 at 2038.415 kb on - strand, within AO353_09295 at 2038.415 kb on - strand, within AO353_09295 at 2038.415 kb on - strand, within AO353_09295 at 2038.415 kb on - strand, within AO353_09295 at 2038.415 kb on - strand, within AO353_09295 at 2038.462 kb on + strand, within AO353_09295 at 2038.462 kb on + strand, within AO353_09295 at 2038.462 kb on + strand at 2038.462 kb on + strand, within AO353_09295 at 2038.463 kb on - strand, within AO353_09295 at 2038.463 kb on - strand, within AO353_09295 at 2038.463 kb on - strand, within AO353_09295 at 2038.463 kb on - strand, within AO353_09295 at 2038.463 kb on - strand, within AO353_09295 at 2038.463 kb on - strand, within AO353_09295 at 2038.463 kb on - strand, within AO353_09295 at 2038.471 kb on + strand, within AO353_09295 at 2038.471 kb on + strand, within AO353_09295 at 2038.471 kb on + strand, within AO353_09295 at 2038.471 kb on + strand, within AO353_09295 at 2038.472 kb on - strand, within AO353_09295 at 2038.472 kb on - strand, within AO353_09295 at 2038.472 kb on - strand, within AO353_09295 at 2038.472 kb on - strand, within AO353_09295 at 2038.472 kb on - strand, within AO353_09295 at 2038.690 kb on + strand at 2038.690 kb on + strand at 2038.690 kb on + strand at 2038.691 kb on - strand at 2038.691 kb on - strand at 2038.691 kb on - strand at 2038.691 kb on - strand at 2038.706 kb on + strand at 2038.747 kb on + strand at 2038.825 kb on + strand at 2038.825 kb on + strand at 2038.825 kb on + strand at 2038.825 kb on + strand at 2038.825 kb on + strand at 2038.825 kb on + strand at 2038.825 kb on + strand at 2038.825 kb on + strand at 2038.843 kb on + strand at 2038.843 kb on + strand at 2038.843 kb on + strand at 2038.843 kb on + strand at 2038.843 kb on + strand at 2039.845 kb on + strand at 2039.845 kb on + strand at 2039.845 kb on + strand at 2039.845 kb on + strand at 2039.845 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 2,037,962 - AO353_09295 0.18 -0.4 2,038,021 + AO353_09295 0.25 +1.2 2,038,021 + AO353_09295 0.25 -0.6 2,038,021 + AO353_09295 0.25 -0.0 2,038,021 + AO353_09295 0.25 +0.5 2,038,021 + AO353_09295 0.25 +0.7 2,038,021 + AO353_09295 0.25 +1.2 2,038,021 + AO353_09295 0.25 -1.3 2,038,021 + AO353_09295 0.25 +2.1 2,038,021 + AO353_09295 0.25 -0.5 2,038,021 + AO353_09295 0.25 -0.5 2,038,022 - AO353_09295 0.25 -0.0 2,038,022 - AO353_09295 0.25 +0.8 2,038,022 - AO353_09295 0.25 +0.5 2,038,022 - AO353_09295 0.25 +0.2 2,038,022 - AO353_09295 0.25 +0.8 2,038,022 - AO353_09295 0.25 -0.2 2,038,022 - AO353_09295 0.25 +0.3 2,038,022 - AO353_09295 0.25 -0.8 2,038,022 - AO353_09295 0.25 -1.4 2,038,022 - AO353_09295 0.25 -0.5 2,038,022 - AO353_09295 0.25 -0.0 2,038,022 - AO353_09295 0.25 -0.0 2,038,022 - AO353_09295 0.25 -1.5 2,038,022 - AO353_09295 0.25 -1.2 2,038,022 - AO353_09295 0.25 +0.6 2,038,022 - AO353_09295 0.25 +1.8 2,038,022 - AO353_09295 0.25 +1.8 2,038,022 - AO353_09295 0.25 -0.9 2,038,022 - AO353_09295 0.25 +0.1 2,038,022 - AO353_09295 0.25 +1.6 2,038,022 - AO353_09295 0.25 -0.6 2,038,022 - AO353_09295 0.25 -0.9 2,038,111 + AO353_09295 0.35 -2.1 2,038,111 + AO353_09295 0.35 -0.5 2,038,111 + AO353_09295 0.35 +1.8 2,038,112 - AO353_09295 0.35 -0.4 2,038,112 - AO353_09295 0.35 -0.7 2,038,112 - AO353_09295 0.35 -0.7 2,038,112 - AO353_09295 0.35 +2.1 2,038,138 + AO353_09295 0.38 -0.0 2,038,183 + AO353_09295 0.43 +0.5 2,038,183 + AO353_09295 0.43 -0.7 2,038,183 + AO353_09295 0.43 -0.4 2,038,227 + AO353_09295 0.49 +0.4 2,038,227 + AO353_09295 0.49 -0.5 2,038,228 - AO353_09295 0.49 -1.3 2,038,324 + AO353_09295 0.60 +0.3 2,038,324 + AO353_09295 0.60 +0.5 2,038,324 + AO353_09295 0.60 -1.1 2,038,373 - AO353_09295 0.66 +1.0 2,038,414 + AO353_09295 0.70 -0.5 2,038,414 + AO353_09295 0.70 -2.8 2,038,414 + AO353_09295 0.70 -1.6 2,038,414 + AO353_09295 0.70 -0.0 2,038,414 + AO353_09295 0.70 +1.6 2,038,415 - AO353_09295 0.71 -0.6 2,038,415 - AO353_09295 0.71 +0.8 2,038,415 - AO353_09295 0.71 +0.8 2,038,415 - AO353_09295 0.71 -0.7 2,038,415 - AO353_09295 0.71 +0.3 2,038,462 + AO353_09295 0.76 +2.8 2,038,462 + AO353_09295 0.76 -1.1 2,038,462 + +1.2 2,038,462 + AO353_09295 0.76 -0.2 2,038,463 - AO353_09295 0.76 +1.8 2,038,463 - AO353_09295 0.76 -0.4 2,038,463 - AO353_09295 0.76 +1.6 2,038,463 - AO353_09295 0.76 +1.9 2,038,463 - AO353_09295 0.76 -0.9 2,038,463 - AO353_09295 0.76 -0.4 2,038,463 - AO353_09295 0.76 +0.1 2,038,471 + AO353_09295 0.77 +0.1 2,038,471 + AO353_09295 0.77 +0.8 2,038,471 + AO353_09295 0.77 +1.2 2,038,471 + AO353_09295 0.77 +0.6 2,038,472 - AO353_09295 0.77 +2.1 2,038,472 - AO353_09295 0.77 +0.4 2,038,472 - AO353_09295 0.77 +1.1 2,038,472 - AO353_09295 0.77 -1.2 2,038,472 - AO353_09295 0.77 -0.4 2,038,690 + +1.0 2,038,690 + +1.0 2,038,690 + +1.2 2,038,691 - +1.2 2,038,691 - +0.9 2,038,691 - -0.0 2,038,691 - -1.2 2,038,706 + -0.4 2,038,747 + +0.5 2,038,825 + +0.1 2,038,825 + -0.2 2,038,825 + +0.6 2,038,825 + +0.8 2,038,825 + +2.8 2,038,825 + -0.1 2,038,825 + -0.6 2,038,825 + -0.6 2,038,843 + -0.6 2,038,843 + +0.6 2,038,843 + +0.2 2,038,843 + +1.2 2,038,843 + -0.1 2,039,845 + +1.8 2,039,845 + -0.7 2,039,845 + -0.0 2,039,845 + -0.1 2,039,845 + -0.0
Or see this region's nucleotide sequence