Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_08290 and AO353_08295 are separated by 183 nucleotides AO353_08295 and AO353_08300 are separated by 64 nucleotides AO353_08300 and AO353_08305 are separated by 115 nucleotides AO353_08305 and AO353_08310 are separated by 124 nucleotides
AO353_08290: AO353_08290 - coniferyl aldehyde dehydrogenase, at 1,821,677 to 1,823,107
_08290
AO353_08295: AO353_08295 - twin-arginine translocation pathway signal protein, at 1,823,291 to 1,823,836
_08295
AO353_08300: AO353_08300 - GMC family oxidoreductase, at 1,823,901 to 1,825,496
_08300
AO353_08305: AO353_08305 - phosphopantetheine adenylyltransferase, at 1,825,612 to 1,826,091
_08305
AO353_08310: AO353_08310 - ferredoxin, at 1,826,216 to 1,826,467
_08310
Position (kb)
1823
1824
1825
1826 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15 at 1822.967 kb on + strand at 1823.051 kb on + strand at 1823.051 kb on + strand at 1823.051 kb on + strand at 1823.051 kb on + strand at 1823.052 kb on - strand at 1823.052 kb on - strand at 1823.112 kb on + strand at 1823.113 kb on - strand at 1823.120 kb on - strand at 1823.120 kb on - strand at 1823.120 kb on - strand at 1823.120 kb on - strand at 1823.120 kb on - strand at 1823.120 kb on - strand at 1823.120 kb on - strand at 1823.120 kb on - strand at 1823.120 kb on - strand at 1823.122 kb on - strand at 1823.122 kb on - strand at 1823.260 kb on + strand at 1823.283 kb on + strand at 1823.283 kb on + strand at 1823.283 kb on + strand at 1823.283 kb on + strand at 1823.284 kb on - strand at 1823.289 kb on + strand at 1823.289 kb on + strand at 1823.289 kb on + strand at 1823.289 kb on + strand at 1823.289 kb on + strand at 1823.289 kb on + strand at 1823.289 kb on + strand at 1823.289 kb on + strand at 1823.290 kb on - strand at 1823.290 kb on - strand at 1823.290 kb on - strand at 1823.290 kb on - strand at 1823.290 kb on - strand at 1823.290 kb on - strand at 1823.290 kb on - strand at 1823.626 kb on + strand, within AO353_08295 at 1823.626 kb on + strand, within AO353_08295 at 1823.626 kb on + strand, within AO353_08295 at 1823.627 kb on - strand, within AO353_08295 at 1823.627 kb on - strand, within AO353_08295 at 1823.627 kb on - strand, within AO353_08295 at 1823.627 kb on - strand, within AO353_08295 at 1823.780 kb on + strand, within AO353_08295 at 1823.780 kb on + strand, within AO353_08295 at 1823.780 kb on + strand, within AO353_08295 at 1823.780 kb on + strand, within AO353_08295 at 1823.780 kb on + strand, within AO353_08295 at 1823.780 kb on + strand, within AO353_08295 at 1823.780 kb on + strand, within AO353_08295 at 1823.781 kb on - strand, within AO353_08295 at 1823.781 kb on - strand, within AO353_08295 at 1823.781 kb on - strand, within AO353_08295 at 1823.781 kb on - strand, within AO353_08295 at 1823.834 kb on + strand at 1823.886 kb on + strand at 1823.886 kb on + strand at 1823.886 kb on + strand at 1823.886 kb on + strand at 1823.886 kb on + strand at 1823.886 kb on + strand at 1823.887 kb on - strand at 1823.887 kb on - strand at 1823.887 kb on - strand at 1823.887 kb on - strand at 1823.887 kb on - strand at 1823.887 kb on - strand at 1823.887 kb on - strand at 1823.887 kb on - strand at 1823.887 kb on - strand at 1823.887 kb on - strand at 1823.887 kb on - strand at 1823.952 kb on + strand at 1823.952 kb on + strand at 1823.953 kb on - strand at 1823.953 kb on - strand at 1823.953 kb on - strand at 1824.060 kb on + strand at 1824.132 kb on + strand, within AO353_08300 at 1824.132 kb on + strand, within AO353_08300 at 1824.133 kb on - strand, within AO353_08300 at 1824.133 kb on - strand, within AO353_08300 at 1824.564 kb on + strand, within AO353_08300 at 1824.564 kb on + strand, within AO353_08300 at 1824.565 kb on - strand, within AO353_08300 at 1824.663 kb on - strand, within AO353_08300 at 1824.663 kb on - strand, within AO353_08300 at 1824.687 kb on + strand, within AO353_08300 at 1824.687 kb on + strand, within AO353_08300 at 1824.687 kb on + strand, within AO353_08300 at 1824.688 kb on - strand, within AO353_08300 at 1824.688 kb on - strand, within AO353_08300 at 1824.688 kb on - strand, within AO353_08300 at 1824.688 kb on - strand, within AO353_08300 at 1824.688 kb on - strand, within AO353_08300 at 1824.688 kb on - strand, within AO353_08300 at 1824.688 kb on - strand, within AO353_08300 at 1824.688 kb on - strand, within AO353_08300 at 1824.688 kb on - strand, within AO353_08300 at 1824.691 kb on + strand, within AO353_08300 at 1824.691 kb on + strand, within AO353_08300 at 1824.691 kb on + strand, within AO353_08300 at 1824.691 kb on + strand, within AO353_08300 at 1824.691 kb on + strand, within AO353_08300 at 1824.691 kb on + strand, within AO353_08300 at 1824.691 kb on + strand, within AO353_08300 at 1824.692 kb on - strand, within AO353_08300 at 1824.692 kb on - strand, within AO353_08300 at 1824.692 kb on - strand, within AO353_08300 at 1824.692 kb on - strand, within AO353_08300 at 1824.692 kb on - strand, within AO353_08300 at 1824.692 kb on - strand, within AO353_08300 at 1824.692 kb on - strand, within AO353_08300 at 1824.692 kb on - strand, within AO353_08300 at 1824.692 kb on - strand, within AO353_08300 at 1824.834 kb on + strand, within AO353_08300 at 1824.835 kb on - strand, within AO353_08300 at 1824.835 kb on - strand, within AO353_08300 at 1824.855 kb on + strand, within AO353_08300 at 1824.855 kb on + strand, within AO353_08300 at 1824.855 kb on + strand, within AO353_08300 at 1824.855 kb on + strand, within AO353_08300 at 1824.855 kb on + strand, within AO353_08300 at 1824.855 kb on - strand, within AO353_08300 at 1824.856 kb on - strand, within AO353_08300 at 1824.903 kb on + strand, within AO353_08300 at 1824.903 kb on + strand, within AO353_08300 at 1824.904 kb on - strand, within AO353_08300 at 1824.904 kb on - strand, within AO353_08300 at 1825.069 kb on + strand, within AO353_08300 at 1825.098 kb on + strand, within AO353_08300 at 1825.099 kb on - strand, within AO353_08300 at 1825.099 kb on - strand, within AO353_08300 at 1825.113 kb on + strand, within AO353_08300 at 1825.113 kb on + strand, within AO353_08300 at 1825.113 kb on + strand, within AO353_08300 at 1825.113 kb on + strand, within AO353_08300 at 1825.113 kb on + strand, within AO353_08300 at 1825.113 kb on + strand, within AO353_08300 at 1825.113 kb on + strand, within AO353_08300 at 1825.113 kb on + strand, within AO353_08300 at 1825.114 kb on - strand, within AO353_08300 at 1825.114 kb on - strand, within AO353_08300 at 1825.114 kb on - strand, within AO353_08300 at 1825.114 kb on - strand, within AO353_08300 at 1825.114 kb on - strand, within AO353_08300 at 1825.129 kb on + strand, within AO353_08300 at 1825.129 kb on + strand, within AO353_08300 at 1825.129 kb on + strand, within AO353_08300 at 1825.129 kb on + strand, within AO353_08300 at 1825.129 kb on + strand, within AO353_08300 at 1825.129 kb on + strand, within AO353_08300 at 1825.129 kb on + strand, within AO353_08300 at 1825.130 kb on - strand, within AO353_08300 at 1825.130 kb on - strand, within AO353_08300 at 1825.130 kb on - strand, within AO353_08300 at 1825.130 kb on - strand, within AO353_08300 at 1825.130 kb on - strand, within AO353_08300 at 1825.130 kb on - strand, within AO353_08300 at 1825.130 kb on - strand, within AO353_08300 at 1825.130 kb on - strand, within AO353_08300 at 1825.130 kb on - strand, within AO353_08300 at 1825.270 kb on - strand, within AO353_08300 at 1825.373 kb on + strand at 1825.373 kb on + strand at 1825.373 kb on + strand at 1825.373 kb on + strand at 1825.374 kb on - strand at 1825.374 kb on - strand at 1825.374 kb on - strand at 1825.374 kb on - strand at 1825.374 kb on - strand at 1825.374 kb on - strand at 1825.374 kb on - strand at 1825.374 kb on - strand at 1825.440 kb on + strand at 1825.440 kb on + strand at 1825.441 kb on - strand at 1825.441 kb on - strand at 1825.506 kb on + strand at 1825.507 kb on - strand at 1825.507 kb on - strand at 1825.520 kb on + strand at 1825.520 kb on + strand at 1825.520 kb on + strand at 1825.520 kb on + strand at 1825.520 kb on + strand at 1825.520 kb on + strand at 1825.520 kb on + strand at 1825.520 kb on + strand at 1825.520 kb on + strand at 1825.520 kb on + strand at 1825.520 kb on + strand at 1825.521 kb on - strand at 1825.521 kb on - strand at 1825.521 kb on - strand at 1825.521 kb on - strand at 1825.521 kb on - strand at 1825.521 kb on - strand at 1825.521 kb on - strand at 1825.521 kb on - strand at 1825.522 kb on + strand at 1825.522 kb on + strand at 1825.522 kb on + strand at 1825.522 kb on + strand at 1825.522 kb on + strand at 1825.523 kb on - strand at 1825.523 kb on - strand at 1825.534 kb on - strand at 1826.089 kb on + strand at 1826.089 kb on + strand at 1826.089 kb on + strand at 1826.090 kb on - strand at 1826.090 kb on - strand at 1826.090 kb on - strand at 1826.090 kb on - strand at 1826.090 kb on - strand at 1826.109 kb on + strand at 1826.109 kb on + strand at 1826.109 kb on + strand at 1826.109 kb on + strand at 1826.109 kb on + strand at 1826.109 kb on + strand at 1826.109 kb on + strand at 1826.109 kb on + strand at 1826.109 kb on + strand at 1826.110 kb on - strand at 1826.110 kb on - strand at 1826.110 kb on - strand at 1826.166 kb on + strand at 1826.441 kb on + strand, within AO353_08310 at 1826.441 kb on + strand, within AO353_08310 at 1826.453 kb on - strand at 1826.469 kb on + strand at 1826.469 kb on + strand at 1826.470 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 1,822,967 + -0.3 1,823,051 + -0.7 1,823,051 + -1.0 1,823,051 + -0.2 1,823,051 + +0.2 1,823,052 - -0.8 1,823,052 - +1.7 1,823,112 + -0.6 1,823,113 - -1.0 1,823,120 - +0.1 1,823,120 - -0.1 1,823,120 - +1.4 1,823,120 - -0.3 1,823,120 - -0.1 1,823,120 - +0.9 1,823,120 - -2.2 1,823,120 - +0.9 1,823,120 - +0.5 1,823,122 - -0.1 1,823,122 - -0.5 1,823,260 + +1.0 1,823,283 + -0.5 1,823,283 + +1.1 1,823,283 + -0.9 1,823,283 + -1.5 1,823,284 - -1.6 1,823,289 + +0.2 1,823,289 + +0.1 1,823,289 + +0.1 1,823,289 + -0.9 1,823,289 + -0.5 1,823,289 + +2.2 1,823,289 + +0.6 1,823,289 + -1.7 1,823,290 - -0.3 1,823,290 - -0.9 1,823,290 - -1.6 1,823,290 - +0.9 1,823,290 - +1.6 1,823,290 - -0.3 1,823,290 - +1.1 1,823,626 + AO353_08295 0.61 -0.9 1,823,626 + AO353_08295 0.61 +1.7 1,823,626 + AO353_08295 0.61 -0.5 1,823,627 - AO353_08295 0.62 +0.3 1,823,627 - AO353_08295 0.62 +0.9 1,823,627 - AO353_08295 0.62 -0.8 1,823,627 - AO353_08295 0.62 +1.2 1,823,780 + AO353_08295 0.90 +0.5 1,823,780 + AO353_08295 0.90 -0.8 1,823,780 + AO353_08295 0.90 +1.1 1,823,780 + AO353_08295 0.90 -0.5 1,823,780 + AO353_08295 0.90 -0.2 1,823,780 + AO353_08295 0.90 -1.3 1,823,780 + AO353_08295 0.90 +1.5 1,823,781 - AO353_08295 0.90 +0.6 1,823,781 - AO353_08295 0.90 +0.1 1,823,781 - AO353_08295 0.90 +0.0 1,823,781 - AO353_08295 0.90 -0.8 1,823,834 + -0.2 1,823,886 + -2.0 1,823,886 + -0.9 1,823,886 + +0.1 1,823,886 + +0.7 1,823,886 + -1.3 1,823,886 + -0.5 1,823,887 - +0.9 1,823,887 - +1.4 1,823,887 - +0.2 1,823,887 - +0.8 1,823,887 - +0.7 1,823,887 - -0.1 1,823,887 - -1.1 1,823,887 - +2.1 1,823,887 - +1.0 1,823,887 - +0.4 1,823,887 - -2.1 1,823,952 + +0.5 1,823,952 + -1.8 1,823,953 - -2.7 1,823,953 - -0.9 1,823,953 - +0.4 1,824,060 + -0.1 1,824,132 + AO353_08300 0.14 -0.4 1,824,132 + AO353_08300 0.14 +0.5 1,824,133 - AO353_08300 0.15 -0.5 1,824,133 - AO353_08300 0.15 -1.9 1,824,564 + AO353_08300 0.42 +0.4 1,824,564 + AO353_08300 0.42 +1.7 1,824,565 - AO353_08300 0.42 +1.0 1,824,663 - AO353_08300 0.48 -0.1 1,824,663 - AO353_08300 0.48 +0.5 1,824,687 + AO353_08300 0.49 +1.0 1,824,687 + AO353_08300 0.49 -0.9 1,824,687 + AO353_08300 0.49 -0.2 1,824,688 - AO353_08300 0.49 -1.7 1,824,688 - AO353_08300 0.49 -0.6 1,824,688 - AO353_08300 0.49 -0.1 1,824,688 - AO353_08300 0.49 +1.1 1,824,688 - AO353_08300 0.49 -1.2 1,824,688 - AO353_08300 0.49 -0.3 1,824,688 - AO353_08300 0.49 +0.4 1,824,688 - AO353_08300 0.49 +1.4 1,824,688 - AO353_08300 0.49 -0.5 1,824,691 + AO353_08300 0.49 +1.4 1,824,691 + AO353_08300 0.49 +0.3 1,824,691 + AO353_08300 0.49 +3.7 1,824,691 + AO353_08300 0.49 -0.7 1,824,691 + AO353_08300 0.49 +0.5 1,824,691 + AO353_08300 0.49 -0.2 1,824,691 + AO353_08300 0.49 +0.7 1,824,692 - AO353_08300 0.50 +0.2 1,824,692 - AO353_08300 0.50 -1.6 1,824,692 - AO353_08300 0.50 +2.4 1,824,692 - AO353_08300 0.50 -0.3 1,824,692 - AO353_08300 0.50 +15.0 1,824,692 - AO353_08300 0.50 -1.4 1,824,692 - AO353_08300 0.50 -1.1 1,824,692 - AO353_08300 0.50 +1.3 1,824,692 - AO353_08300 0.50 +0.4 1,824,834 + AO353_08300 0.58 +0.7 1,824,835 - AO353_08300 0.59 +1.7 1,824,835 - AO353_08300 0.59 -0.1 1,824,855 + AO353_08300 0.60 -0.6 1,824,855 + AO353_08300 0.60 +0.1 1,824,855 + AO353_08300 0.60 -0.1 1,824,855 + AO353_08300 0.60 +0.2 1,824,855 + AO353_08300 0.60 +0.7 1,824,855 - AO353_08300 0.60 -0.8 1,824,856 - AO353_08300 0.60 -1.4 1,824,903 + AO353_08300 0.63 +0.7 1,824,903 + AO353_08300 0.63 -0.5 1,824,904 - AO353_08300 0.63 +0.7 1,824,904 - AO353_08300 0.63 -1.0 1,825,069 + AO353_08300 0.73 +1.5 1,825,098 + AO353_08300 0.75 +0.2 1,825,099 - AO353_08300 0.75 +0.9 1,825,099 - AO353_08300 0.75 +1.3 1,825,113 + AO353_08300 0.76 +0.7 1,825,113 + AO353_08300 0.76 +0.4 1,825,113 + AO353_08300 0.76 +1.0 1,825,113 + AO353_08300 0.76 +2.3 1,825,113 + AO353_08300 0.76 +1.0 1,825,113 + AO353_08300 0.76 -0.1 1,825,113 + AO353_08300 0.76 -0.3 1,825,113 + AO353_08300 0.76 +0.0 1,825,114 - AO353_08300 0.76 +1.4 1,825,114 - AO353_08300 0.76 -0.1 1,825,114 - AO353_08300 0.76 +0.7 1,825,114 - AO353_08300 0.76 +1.3 1,825,114 - AO353_08300 0.76 +2.7 1,825,129 + AO353_08300 0.77 +0.9 1,825,129 + AO353_08300 0.77 -1.1 1,825,129 + AO353_08300 0.77 -0.3 1,825,129 + AO353_08300 0.77 +1.5 1,825,129 + AO353_08300 0.77 -1.5 1,825,129 + AO353_08300 0.77 -0.6 1,825,129 + AO353_08300 0.77 -0.8 1,825,130 - AO353_08300 0.77 +0.7 1,825,130 - AO353_08300 0.77 +1.0 1,825,130 - AO353_08300 0.77 -2.5 1,825,130 - AO353_08300 0.77 +1.1 1,825,130 - AO353_08300 0.77 -0.6 1,825,130 - AO353_08300 0.77 -0.5 1,825,130 - AO353_08300 0.77 -1.4 1,825,130 - AO353_08300 0.77 -1.8 1,825,130 - AO353_08300 0.77 +0.0 1,825,270 - AO353_08300 0.86 +0.1 1,825,373 + -0.5 1,825,373 + +0.7 1,825,373 + -0.8 1,825,373 + -0.3 1,825,374 - -1.9 1,825,374 - +2.1 1,825,374 - +0.7 1,825,374 - +0.1 1,825,374 - -0.4 1,825,374 - +0.4 1,825,374 - -1.0 1,825,374 - +0.1 1,825,440 + +0.1 1,825,440 + +0.6 1,825,441 - -0.1 1,825,441 - +0.9 1,825,506 + -1.6 1,825,507 - +1.7 1,825,507 - +0.4 1,825,520 + +0.4 1,825,520 + +1.9 1,825,520 + -1.4 1,825,520 + -0.1 1,825,520 + -0.3 1,825,520 + +0.5 1,825,520 + -1.8 1,825,520 + +0.4 1,825,520 + +1.3 1,825,520 + -0.5 1,825,520 + +1.1 1,825,521 - +0.9 1,825,521 - -0.5 1,825,521 - +1.4 1,825,521 - -0.7 1,825,521 - -0.0 1,825,521 - -0.5 1,825,521 - -0.8 1,825,521 - +1.5 1,825,522 + -1.0 1,825,522 + +1.2 1,825,522 + -0.3 1,825,522 + -1.0 1,825,522 + +0.2 1,825,523 - -0.1 1,825,523 - +0.3 1,825,534 - -0.1 1,826,089 + -0.9 1,826,089 + -0.0 1,826,089 + -0.2 1,826,090 - +0.3 1,826,090 - +0.1 1,826,090 - +1.2 1,826,090 - +0.7 1,826,090 - +0.4 1,826,109 + -0.0 1,826,109 + +0.7 1,826,109 + +1.1 1,826,109 + -2.3 1,826,109 + -1.6 1,826,109 + -0.1 1,826,109 + -0.0 1,826,109 + -0.1 1,826,109 + +2.0 1,826,110 - +0.5 1,826,110 - +0.4 1,826,110 - +1.7 1,826,166 + +0.7 1,826,441 + AO353_08310 0.89 +1.1 1,826,441 + AO353_08310 0.89 +2.7 1,826,453 - -0.2 1,826,469 + -0.8 1,826,469 + -0.3 1,826,470 - +0.1
Or see this region's nucleotide sequence