Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_07145 and AO353_07150 are separated by 67 nucleotides AO353_07150 and AO353_07155 are separated by 167 nucleotides AO353_07155 and AO353_07160 are separated by 135 nucleotides AO353_07160 and AO353_07165 are separated by 34 nucleotides
AO353_07145: AO353_07145 - anhydro-N-acetylmuramic acid kinase, at 1,570,694 to 1,571,785
_07145
AO353_07150: AO353_07150 - iron-sulfur cluster insertion protein ErpA, at 1,571,853 to 1,572,203
_07150
AO353_07155: AO353_07155 - N-acetyl-gamma-glutamyl-phosphate reductase, at 1,572,371 to 1,573,405
_07155
AO353_07160: AO353_07160 - hypothetical protein, at 1,573,541 to 1,573,972
_07160
AO353_07165: AO353_07165 - 2-nitropropane dioxygenase, at 1,574,007 to 1,574,975
_07165
Position (kb)
1572
1573
1574 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1571.412 kb on + strand, within AO353_07145 at 1571.412 kb on + strand, within AO353_07145 at 1571.412 kb on + strand, within AO353_07145 at 1571.412 kb on + strand, within AO353_07145 at 1571.412 kb on + strand, within AO353_07145 at 1571.413 kb on - strand, within AO353_07145 at 1571.413 kb on - strand, within AO353_07145 at 1571.413 kb on - strand, within AO353_07145 at 1571.413 kb on - strand, within AO353_07145 at 1571.413 kb on - strand, within AO353_07145 at 1571.413 kb on - strand, within AO353_07145 at 1571.523 kb on + strand, within AO353_07145 at 1571.523 kb on + strand, within AO353_07145 at 1571.524 kb on - strand, within AO353_07145 at 1571.524 kb on - strand, within AO353_07145 at 1571.645 kb on + strand, within AO353_07145 at 1571.645 kb on + strand, within AO353_07145 at 1571.646 kb on - strand, within AO353_07145 at 1571.652 kb on + strand, within AO353_07145 at 1571.652 kb on + strand, within AO353_07145 at 1571.653 kb on - strand, within AO353_07145 at 1571.713 kb on + strand at 1571.713 kb on + strand at 1571.714 kb on - strand at 1571.754 kb on + strand at 1571.755 kb on - strand at 1571.774 kb on + strand at 1571.774 kb on + strand at 1571.774 kb on + strand at 1571.775 kb on - strand at 1571.775 kb on - strand at 1572.224 kb on - strand at 1572.293 kb on + strand at 1572.293 kb on + strand at 1572.293 kb on + strand at 1572.293 kb on + strand at 1572.293 kb on + strand at 1572.294 kb on - strand at 1572.294 kb on - strand at 1572.294 kb on - strand at 1572.294 kb on - strand at 1572.294 kb on - strand at 1572.294 kb on - strand at 1572.294 kb on - strand at 1572.294 kb on - strand at 1572.295 kb on + strand at 1572.295 kb on + strand at 1572.295 kb on + strand at 1572.295 kb on + strand at 1572.295 kb on + strand at 1572.295 kb on + strand at 1572.295 kb on + strand at 1572.296 kb on - strand at 1572.296 kb on - strand at 1572.296 kb on - strand at 1572.324 kb on + strand at 1572.324 kb on + strand at 1572.372 kb on + strand at 1572.372 kb on + strand at 1572.373 kb on - strand at 1572.373 kb on - strand at 1572.373 kb on - strand at 1572.529 kb on + strand, within AO353_07155 at 1572.530 kb on - strand, within AO353_07155 at 1572.641 kb on + strand, within AO353_07155 at 1572.641 kb on + strand, within AO353_07155 at 1572.641 kb on + strand, within AO353_07155 at 1572.641 kb on + strand, within AO353_07155 at 1572.642 kb on - strand, within AO353_07155 at 1572.642 kb on - strand, within AO353_07155 at 1572.642 kb on - strand, within AO353_07155 at 1572.642 kb on - strand, within AO353_07155 at 1572.642 kb on - strand, within AO353_07155 at 1572.666 kb on + strand, within AO353_07155 at 1572.666 kb on + strand, within AO353_07155 at 1572.666 kb on + strand, within AO353_07155 at 1572.666 kb on + strand, within AO353_07155 at 1572.666 kb on + strand, within AO353_07155 at 1572.666 kb on + strand, within AO353_07155 at 1572.666 kb on + strand, within AO353_07155 at 1572.667 kb on - strand, within AO353_07155 at 1572.667 kb on - strand, within AO353_07155 at 1572.667 kb on - strand, within AO353_07155 at 1572.667 kb on - strand, within AO353_07155 at 1572.667 kb on - strand, within AO353_07155 at 1572.682 kb on + strand, within AO353_07155 at 1572.796 kb on - strand, within AO353_07155 at 1572.826 kb on - strand, within AO353_07155 at 1572.887 kb on + strand, within AO353_07155 at 1572.887 kb on + strand, within AO353_07155 at 1572.888 kb on - strand, within AO353_07155 at 1572.898 kb on + strand, within AO353_07155 at 1572.899 kb on - strand, within AO353_07155 at 1573.021 kb on - strand, within AO353_07155 at 1573.065 kb on + strand, within AO353_07155 at 1573.066 kb on - strand, within AO353_07155 at 1573.143 kb on - strand, within AO353_07155 at 1573.166 kb on + strand, within AO353_07155 at 1573.166 kb on + strand, within AO353_07155 at 1573.249 kb on - strand, within AO353_07155 at 1573.269 kb on + strand, within AO353_07155 at 1573.269 kb on + strand, within AO353_07155 at 1573.316 kb on + strand at 1573.316 kb on + strand at 1573.316 kb on + strand at 1573.405 kb on + strand at 1573.406 kb on - strand at 1573.443 kb on + strand at 1573.446 kb on + strand at 1573.446 kb on + strand at 1573.447 kb on - strand at 1573.447 kb on - strand at 1573.485 kb on + strand at 1573.485 kb on + strand at 1573.485 kb on + strand at 1573.485 kb on + strand at 1573.485 kb on + strand at 1573.485 kb on + strand at 1573.503 kb on + strand at 1573.503 kb on + strand at 1573.504 kb on - strand at 1573.504 kb on - strand at 1573.506 kb on + strand at 1573.506 kb on + strand at 1573.506 kb on + strand at 1573.506 kb on + strand at 1573.506 kb on + strand at 1573.506 kb on + strand at 1573.532 kb on + strand at 1573.532 kb on + strand at 1573.532 kb on + strand at 1573.532 kb on + strand at 1573.536 kb on + strand at 1573.536 kb on + strand at 1573.536 kb on + strand at 1573.970 kb on + strand at 1573.970 kb on + strand at 1573.970 kb on + strand at 1573.970 kb on + strand at 1573.970 kb on + strand at 1573.970 kb on + strand at 1573.970 kb on + strand at 1573.971 kb on - strand at 1573.971 kb on - strand at 1573.971 kb on - strand at 1573.976 kb on + strand at 1573.976 kb on + strand at 1573.976 kb on + strand at 1573.977 kb on - strand at 1573.977 kb on - strand at 1573.977 kb on - strand at 1573.977 kb on - strand at 1573.977 kb on - strand at 1573.977 kb on - strand at 1573.977 kb on - strand at 1573.977 kb on - strand at 1573.977 kb on - strand at 1573.977 kb on - strand at 1573.977 kb on - strand at 1573.977 kb on - strand at 1573.977 kb on - strand at 1573.980 kb on + strand at 1573.981 kb on - strand at 1573.999 kb on + strand at 1573.999 kb on + strand at 1573.999 kb on + strand at 1574.000 kb on - strand at 1574.201 kb on - strand, within AO353_07165
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 1,571,412 + AO353_07145 0.66 +0.5 1,571,412 + AO353_07145 0.66 -0.6 1,571,412 + AO353_07145 0.66 +0.2 1,571,412 + AO353_07145 0.66 -0.3 1,571,412 + AO353_07145 0.66 -1.2 1,571,413 - AO353_07145 0.66 +0.6 1,571,413 - AO353_07145 0.66 +0.2 1,571,413 - AO353_07145 0.66 -0.0 1,571,413 - AO353_07145 0.66 -0.6 1,571,413 - AO353_07145 0.66 +2.1 1,571,413 - AO353_07145 0.66 -0.9 1,571,523 + AO353_07145 0.76 -0.6 1,571,523 + AO353_07145 0.76 -0.5 1,571,524 - AO353_07145 0.76 -0.8 1,571,524 - AO353_07145 0.76 +1.7 1,571,645 + AO353_07145 0.87 -0.4 1,571,645 + AO353_07145 0.87 -0.8 1,571,646 - AO353_07145 0.87 -0.2 1,571,652 + AO353_07145 0.88 +0.9 1,571,652 + AO353_07145 0.88 +2.5 1,571,653 - AO353_07145 0.88 +0.2 1,571,713 + -1.3 1,571,713 + -2.3 1,571,714 - -1.1 1,571,754 + +0.3 1,571,755 - +0.2 1,571,774 + +0.9 1,571,774 + -0.3 1,571,774 + -0.1 1,571,775 - +0.0 1,571,775 - -0.9 1,572,224 - +0.3 1,572,293 + +0.0 1,572,293 + -1.6 1,572,293 + -0.4 1,572,293 + -0.8 1,572,293 + -0.3 1,572,294 - -0.1 1,572,294 - -1.6 1,572,294 - +0.3 1,572,294 - -1.3 1,572,294 - -0.2 1,572,294 - -0.1 1,572,294 - -1.7 1,572,294 - +0.2 1,572,295 + +0.7 1,572,295 + -2.1 1,572,295 + -1.4 1,572,295 + -0.7 1,572,295 + -0.1 1,572,295 + +0.9 1,572,295 + +0.5 1,572,296 - -0.2 1,572,296 - -0.3 1,572,296 - -0.8 1,572,324 + +2.5 1,572,324 + -1.1 1,572,372 + +0.7 1,572,372 + -0.5 1,572,373 - -0.6 1,572,373 - +0.2 1,572,373 - +0.9 1,572,529 + AO353_07155 0.15 -1.3 1,572,530 - AO353_07155 0.15 -0.1 1,572,641 + AO353_07155 0.26 -0.1 1,572,641 + AO353_07155 0.26 +1.2 1,572,641 + AO353_07155 0.26 -1.5 1,572,641 + AO353_07155 0.26 +0.9 1,572,642 - AO353_07155 0.26 -1.5 1,572,642 - AO353_07155 0.26 -0.9 1,572,642 - AO353_07155 0.26 -0.3 1,572,642 - AO353_07155 0.26 +0.5 1,572,642 - AO353_07155 0.26 -1.6 1,572,666 + AO353_07155 0.29 -0.7 1,572,666 + AO353_07155 0.29 -0.1 1,572,666 + AO353_07155 0.29 -1.3 1,572,666 + AO353_07155 0.29 -0.9 1,572,666 + AO353_07155 0.29 +0.9 1,572,666 + AO353_07155 0.29 -0.9 1,572,666 + AO353_07155 0.29 -0.3 1,572,667 - AO353_07155 0.29 -0.5 1,572,667 - AO353_07155 0.29 -0.9 1,572,667 - AO353_07155 0.29 -1.2 1,572,667 - AO353_07155 0.29 +0.5 1,572,667 - AO353_07155 0.29 -0.1 1,572,682 + AO353_07155 0.30 -2.1 1,572,796 - AO353_07155 0.41 -0.1 1,572,826 - AO353_07155 0.44 -1.6 1,572,887 + AO353_07155 0.50 -1.8 1,572,887 + AO353_07155 0.50 +0.9 1,572,888 - AO353_07155 0.50 -0.6 1,572,898 + AO353_07155 0.51 -2.6 1,572,899 - AO353_07155 0.51 +1.1 1,573,021 - AO353_07155 0.63 -0.6 1,573,065 + AO353_07155 0.67 -0.6 1,573,066 - AO353_07155 0.67 -1.4 1,573,143 - AO353_07155 0.75 -0.9 1,573,166 + AO353_07155 0.77 -2.2 1,573,166 + AO353_07155 0.77 -0.5 1,573,249 - AO353_07155 0.85 -1.3 1,573,269 + AO353_07155 0.87 -0.5 1,573,269 + AO353_07155 0.87 +1.1 1,573,316 + -0.9 1,573,316 + +2.1 1,573,316 + -0.3 1,573,405 + -0.5 1,573,406 - -0.8 1,573,443 + -0.5 1,573,446 + -1.0 1,573,446 + -0.3 1,573,447 - -0.2 1,573,447 - -0.1 1,573,485 + +0.8 1,573,485 + +0.4 1,573,485 + +0.7 1,573,485 + -1.1 1,573,485 + -0.5 1,573,485 + -1.2 1,573,503 + +0.5 1,573,503 + +0.4 1,573,504 - +0.6 1,573,504 - +0.8 1,573,506 + -0.6 1,573,506 + +0.4 1,573,506 + -1.6 1,573,506 + -0.2 1,573,506 + -0.2 1,573,506 + +3.0 1,573,532 + +0.2 1,573,532 + -1.4 1,573,532 + +0.1 1,573,532 + -0.4 1,573,536 + +0.2 1,573,536 + +0.8 1,573,536 + -0.6 1,573,970 + -0.6 1,573,970 + +0.4 1,573,970 + -0.6 1,573,970 + +0.3 1,573,970 + -0.1 1,573,970 + +0.9 1,573,970 + -0.6 1,573,971 - +0.1 1,573,971 - -0.6 1,573,971 - +0.8 1,573,976 + -0.4 1,573,976 + -0.0 1,573,976 + -0.5 1,573,977 - +0.9 1,573,977 - +1.5 1,573,977 - -1.4 1,573,977 - -0.6 1,573,977 - -0.3 1,573,977 - +0.0 1,573,977 - -1.1 1,573,977 - +0.3 1,573,977 - +0.9 1,573,977 - -1.0 1,573,977 - -1.8 1,573,977 - -1.2 1,573,977 - +0.3 1,573,980 + +1.9 1,573,981 - +1.5 1,573,999 + -0.1 1,573,999 + +0.4 1,573,999 + -0.6 1,574,000 - +0.1 1,574,201 - AO353_07165 0.20 -0.6
Or see this region's nucleotide sequence