Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_06200 and AO353_06205 are separated by 6 nucleotides AO353_06205 and AO353_06210 are separated by 112 nucleotides AO353_06210 and AO353_06215 are separated by 2 nucleotides
AO353_06200: AO353_06200 - chemotaxis protein, at 1,382,687 to 1,384,309
_06200
AO353_06205: AO353_06205 - hypothetical protein, at 1,384,316 to 1,385,197
_06205
AO353_06210: AO353_06210 - xylose isomerase, at 1,385,310 to 1,386,125
_06210
AO353_06215: AO353_06215 - oxidoreductase, at 1,386,128 to 1,387,183
_06215
Position (kb)
1384
1385
1386 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6 at 1383.487 kb on + strand, within AO353_06200 at 1383.487 kb on + strand, within AO353_06200 at 1383.487 kb on + strand, within AO353_06200 at 1383.488 kb on - strand, within AO353_06200 at 1383.488 kb on - strand, within AO353_06200 at 1383.488 kb on - strand, within AO353_06200 at 1383.488 kb on - strand, within AO353_06200 at 1383.493 kb on + strand, within AO353_06200 at 1383.804 kb on + strand, within AO353_06200 at 1383.804 kb on + strand, within AO353_06200 at 1383.804 kb on + strand, within AO353_06200 at 1383.805 kb on - strand, within AO353_06200 at 1384.528 kb on + strand, within AO353_06205 at 1384.528 kb on + strand, within AO353_06205 at 1384.617 kb on - strand, within AO353_06205 at 1384.683 kb on + strand, within AO353_06205 at 1384.683 kb on + strand, within AO353_06205 at 1384.683 kb on + strand, within AO353_06205 at 1384.684 kb on - strand, within AO353_06205 at 1384.684 kb on - strand, within AO353_06205 at 1384.684 kb on - strand, within AO353_06205 at 1384.774 kb on + strand, within AO353_06205 at 1385.043 kb on + strand, within AO353_06205 at 1385.043 kb on + strand, within AO353_06205 at 1385.043 kb on + strand, within AO353_06205 at 1385.044 kb on - strand, within AO353_06205 at 1385.074 kb on - strand, within AO353_06205 at 1385.074 kb on - strand, within AO353_06205 at 1385.088 kb on + strand, within AO353_06205 at 1385.088 kb on + strand, within AO353_06205 at 1385.088 kb on + strand, within AO353_06205 at 1385.088 kb on + strand, within AO353_06205 at 1385.088 kb on + strand, within AO353_06205 at 1385.088 kb on + strand, within AO353_06205 at 1385.089 kb on - strand, within AO353_06205 at 1385.089 kb on - strand, within AO353_06205 at 1385.089 kb on - strand, within AO353_06205 at 1385.089 kb on - strand, within AO353_06205 at 1385.089 kb on - strand, within AO353_06205 at 1385.189 kb on + strand at 1385.252 kb on + strand at 1385.252 kb on + strand at 1385.273 kb on - strand at 1385.446 kb on - strand, within AO353_06210 at 1385.651 kb on - strand, within AO353_06210 at 1385.651 kb on - strand, within AO353_06210 at 1385.675 kb on + strand, within AO353_06210 at 1385.675 kb on + strand, within AO353_06210 at 1385.675 kb on + strand, within AO353_06210 at 1385.675 kb on + strand, within AO353_06210 at 1385.675 kb on + strand, within AO353_06210 at 1385.675 kb on + strand, within AO353_06210 at 1385.676 kb on - strand, within AO353_06210 at 1385.676 kb on - strand, within AO353_06210 at 1385.676 kb on - strand, within AO353_06210 at 1385.676 kb on - strand, within AO353_06210 at 1385.676 kb on - strand, within AO353_06210 at 1385.820 kb on + strand, within AO353_06210 at 1385.820 kb on + strand, within AO353_06210 at 1385.820 kb on + strand, within AO353_06210 at 1385.821 kb on - strand, within AO353_06210 at 1385.821 kb on - strand, within AO353_06210 at 1385.821 kb on - strand, within AO353_06210 at 1385.821 kb on - strand, within AO353_06210 at 1385.821 kb on - strand, within AO353_06210 at 1386.035 kb on + strand, within AO353_06210 at 1386.035 kb on + strand, within AO353_06210 at 1386.035 kb on + strand, within AO353_06210 at 1386.035 kb on + strand, within AO353_06210 at 1386.035 kb on + strand, within AO353_06210 at 1386.036 kb on - strand, within AO353_06210 at 1386.036 kb on - strand, within AO353_06210 at 1386.036 kb on - strand, within AO353_06210 at 1386.037 kb on + strand, within AO353_06210 at 1386.037 kb on + strand, within AO353_06210 at 1386.037 kb on + strand, within AO353_06210 at 1386.038 kb on - strand, within AO353_06210 at 1386.038 kb on - strand, within AO353_06210 at 1386.038 kb on - strand, within AO353_06210 at 1386.113 kb on + strand at 1386.113 kb on + strand at 1386.113 kb on + strand at 1386.113 kb on + strand at 1386.113 kb on + strand at 1386.114 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 1,383,487 + AO353_06200 0.49 -1.9 1,383,487 + AO353_06200 0.49 -0.5 1,383,487 + AO353_06200 0.49 +0.8 1,383,488 - AO353_06200 0.49 +0.3 1,383,488 - AO353_06200 0.49 +0.3 1,383,488 - AO353_06200 0.49 +0.4 1,383,488 - AO353_06200 0.49 +0.9 1,383,493 + AO353_06200 0.50 +0.1 1,383,804 + AO353_06200 0.69 -1.7 1,383,804 + AO353_06200 0.69 +0.3 1,383,804 + AO353_06200 0.69 -0.5 1,383,805 - AO353_06200 0.69 +0.9 1,384,528 + AO353_06205 0.24 +0.2 1,384,528 + AO353_06205 0.24 +0.9 1,384,617 - AO353_06205 0.34 +1.2 1,384,683 + AO353_06205 0.42 +0.9 1,384,683 + AO353_06205 0.42 +0.6 1,384,683 + AO353_06205 0.42 +0.3 1,384,684 - AO353_06205 0.42 +0.4 1,384,684 - AO353_06205 0.42 -0.6 1,384,684 - AO353_06205 0.42 +1.0 1,384,774 + AO353_06205 0.52 +0.1 1,385,043 + AO353_06205 0.82 +1.8 1,385,043 + AO353_06205 0.82 -1.5 1,385,043 + AO353_06205 0.82 +0.8 1,385,044 - AO353_06205 0.83 -0.5 1,385,074 - AO353_06205 0.86 +0.9 1,385,074 - AO353_06205 0.86 +0.9 1,385,088 + AO353_06205 0.88 +0.8 1,385,088 + AO353_06205 0.88 +0.9 1,385,088 + AO353_06205 0.88 +0.5 1,385,088 + AO353_06205 0.88 +6.6 1,385,088 + AO353_06205 0.88 +2.1 1,385,088 + AO353_06205 0.88 -0.8 1,385,089 - AO353_06205 0.88 +0.2 1,385,089 - AO353_06205 0.88 -1.6 1,385,089 - AO353_06205 0.88 +1.3 1,385,089 - AO353_06205 0.88 -0.6 1,385,089 - AO353_06205 0.88 -0.1 1,385,189 + -1.1 1,385,252 + -2.2 1,385,252 + -0.3 1,385,273 - +0.5 1,385,446 - AO353_06210 0.17 +0.5 1,385,651 - AO353_06210 0.42 +0.6 1,385,651 - AO353_06210 0.42 +0.8 1,385,675 + AO353_06210 0.45 +0.7 1,385,675 + AO353_06210 0.45 +0.2 1,385,675 + AO353_06210 0.45 -1.3 1,385,675 + AO353_06210 0.45 +0.8 1,385,675 + AO353_06210 0.45 -0.8 1,385,675 + AO353_06210 0.45 +0.7 1,385,676 - AO353_06210 0.45 +1.2 1,385,676 - AO353_06210 0.45 +0.7 1,385,676 - AO353_06210 0.45 -0.6 1,385,676 - AO353_06210 0.45 -0.0 1,385,676 - AO353_06210 0.45 -0.0 1,385,820 + AO353_06210 0.62 +0.9 1,385,820 + AO353_06210 0.62 +1.8 1,385,820 + AO353_06210 0.62 -1.0 1,385,821 - AO353_06210 0.63 -0.2 1,385,821 - AO353_06210 0.63 +0.7 1,385,821 - AO353_06210 0.63 -0.5 1,385,821 - AO353_06210 0.63 +0.7 1,385,821 - AO353_06210 0.63 -2.0 1,386,035 + AO353_06210 0.89 -1.5 1,386,035 + AO353_06210 0.89 +0.4 1,386,035 + AO353_06210 0.89 +1.7 1,386,035 + AO353_06210 0.89 -1.1 1,386,035 + AO353_06210 0.89 +0.5 1,386,036 - AO353_06210 0.89 -1.0 1,386,036 - AO353_06210 0.89 -1.1 1,386,036 - AO353_06210 0.89 -1.1 1,386,037 + AO353_06210 0.89 -2.4 1,386,037 + AO353_06210 0.89 +0.4 1,386,037 + AO353_06210 0.89 -0.0 1,386,038 - AO353_06210 0.89 -0.4 1,386,038 - AO353_06210 0.89 -0.3 1,386,038 - AO353_06210 0.89 +0.9 1,386,113 + +0.1 1,386,113 + +0.2 1,386,113 + -0.1 1,386,113 + +1.5 1,386,113 + +0.5 1,386,114 - +0.3
Or see this region's nucleotide sequence