Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03925 and AO353_03930 are separated by 174 nucleotides AO353_03930 and AO353_03935 are separated by 58 nucleotides AO353_03935 and AO353_03940 are separated by 565 nucleotides
AO353_03925: AO353_03925 - lysine transporter LysE, at 839,362 to 839,964
_03925
AO353_03930: AO353_03930 - superoxide dismutase, at 840,139 to 840,735
_03930
AO353_03935: AO353_03935 - fructose-bisphosphate aldolase, at 840,794 to 841,087
_03935
AO353_03940: AO353_03940 - hypothetical protein, at 841,653 to 842,597
_03940
Position (kb) 840
841
842 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 839.797 kb on + strand, within AO353_03925 at 839.797 kb on + strand, within AO353_03925 at 839.797 kb on + strand, within AO353_03925 at 839.797 kb on + strand, within AO353_03925 at 839.797 kb on + strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.801 kb on + strand, within AO353_03925 at 839.801 kb on + strand, within AO353_03925 at 839.801 kb on + strand, within AO353_03925 at 839.801 kb on + strand, within AO353_03925 at 839.801 kb on + strand, within AO353_03925 at 839.802 kb on - strand, within AO353_03925 at 839.802 kb on - strand, within AO353_03925 at 839.802 kb on - strand, within AO353_03925 at 839.966 kb on + strand at 839.966 kb on + strand at 839.970 kb on - strand at 839.970 kb on - strand at 839.970 kb on - strand at 839.970 kb on - strand at 839.970 kb on - strand at 839.990 kb on + strand at 839.990 kb on + strand at 839.991 kb on - strand at 839.991 kb on - strand at 840.015 kb on - strand at 840.033 kb on + strand at 840.033 kb on + strand at 840.033 kb on + strand at 840.033 kb on + strand at 840.034 kb on - strand at 840.034 kb on - strand at 840.034 kb on - strand at 840.061 kb on + strand at 840.733 kb on + strand at 840.733 kb on + strand at 840.733 kb on + strand at 840.733 kb on + strand at 840.734 kb on - strand at 840.734 kb on - strand at 840.734 kb on - strand at 840.778 kb on + strand at 840.909 kb on + strand, within AO353_03935 at 840.945 kb on + strand, within AO353_03935 at 840.945 kb on + strand, within AO353_03935 at 840.945 kb on + strand, within AO353_03935 at 840.945 kb on + strand, within AO353_03935 at 840.945 kb on + strand at 840.945 kb on + strand, within AO353_03935 at 840.946 kb on - strand, within AO353_03935 at 840.946 kb on - strand, within AO353_03935 at 840.946 kb on - strand, within AO353_03935 at 840.962 kb on - strand, within AO353_03935 at 841.029 kb on + strand, within AO353_03935 at 841.087 kb on + strand at 841.087 kb on + strand at 841.087 kb on + strand at 841.087 kb on + strand at 841.087 kb on + strand at 841.088 kb on - strand at 841.088 kb on - strand at 841.091 kb on + strand at 841.091 kb on + strand at 841.091 kb on + strand at 841.091 kb on + strand at 841.091 kb on + strand at 841.091 kb on + strand at 841.091 kb on + strand at 841.091 kb on + strand at 841.092 kb on - strand at 841.092 kb on - strand at 841.092 kb on - strand at 841.092 kb on - strand at 841.092 kb on - strand at 841.092 kb on - strand at 841.108 kb on + strand at 841.121 kb on - strand at 841.152 kb on + strand at 841.152 kb on + strand at 841.152 kb on + strand at 841.152 kb on + strand at 841.153 kb on - strand at 841.153 kb on - strand at 841.153 kb on - strand at 841.153 kb on - strand at 841.153 kb on - strand at 841.153 kb on - strand at 841.153 kb on - strand at 841.153 kb on - strand at 841.153 kb on - strand at 841.156 kb on + strand at 841.156 kb on + strand at 841.156 kb on + strand at 841.156 kb on + strand at 841.156 kb on + strand at 841.156 kb on + strand at 841.156 kb on + strand at 841.156 kb on + strand at 841.156 kb on + strand at 841.156 kb on + strand at 841.156 kb on + strand at 841.156 kb on + strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.157 kb on - strand at 841.227 kb on + strand at 841.227 kb on + strand at 841.227 kb on + strand at 841.227 kb on + strand at 841.261 kb on + strand at 841.262 kb on - strand at 841.268 kb on + strand at 841.269 kb on - strand at 841.276 kb on + strand at 841.276 kb on + strand at 841.276 kb on + strand at 841.276 kb on + strand at 841.276 kb on + strand at 841.276 kb on + strand at 841.276 kb on + strand at 841.276 kb on + strand at 841.276 kb on + strand at 841.276 kb on + strand at 841.277 kb on - strand at 841.277 kb on - strand at 841.277 kb on - strand at 841.277 kb on - strand at 841.277 kb on - strand at 841.277 kb on - strand at 841.277 kb on - strand at 841.281 kb on + strand at 841.282 kb on - strand at 841.282 kb on - strand at 841.284 kb on + strand at 841.284 kb on + strand at 841.284 kb on + strand at 841.284 kb on + strand at 841.284 kb on + strand at 841.284 kb on + strand at 841.284 kb on + strand at 841.285 kb on - strand at 841.285 kb on - strand at 841.285 kb on - strand at 841.285 kb on - strand at 841.285 kb on - strand at 841.285 kb on - strand at 841.285 kb on - strand at 841.285 kb on - strand at 841.285 kb on - strand at 841.285 kb on - strand at 841.285 kb on - strand at 841.285 kb on - strand at 841.285 kb on - strand at 841.290 kb on + strand at 841.290 kb on + strand at 841.290 kb on + strand at 841.290 kb on + strand at 841.291 kb on - strand at 841.291 kb on - strand at 841.291 kb on - strand at 841.291 kb on - strand at 841.345 kb on + strand at 841.346 kb on - strand at 841.358 kb on + strand at 841.359 kb on - strand at 841.379 kb on - strand at 841.379 kb on - strand at 841.440 kb on + strand at 841.542 kb on + strand at 841.542 kb on + strand at 841.542 kb on + strand at 841.542 kb on + strand at 841.542 kb on + strand at 841.542 kb on + strand at 841.543 kb on - strand at 841.543 kb on - strand at 841.548 kb on + strand at 841.548 kb on + strand at 841.548 kb on + strand at 841.548 kb on + strand at 841.548 kb on + strand at 841.548 kb on + strand at 841.549 kb on - strand at 841.549 kb on - strand at 841.549 kb on - strand at 841.549 kb on - strand at 841.552 kb on - strand at 841.552 kb on - strand at 841.595 kb on - strand at 841.635 kb on + strand at 841.635 kb on + strand at 841.636 kb on - strand at 841.749 kb on + strand, within AO353_03940 at 841.828 kb on - strand, within AO353_03940 at 841.828 kb on - strand, within AO353_03940 at 841.828 kb on - strand, within AO353_03940 at 841.828 kb on - strand, within AO353_03940 at 841.828 kb on - strand, within AO353_03940 at 841.828 kb on - strand, within AO353_03940 at 841.828 kb on - strand, within AO353_03940 at 841.828 kb on - strand, within AO353_03940 at 841.828 kb on - strand, within AO353_03940 at 841.828 kb on - strand, within AO353_03940 at 841.828 kb on - strand, within AO353_03940 at 841.828 kb on - strand, within AO353_03940 at 841.828 kb on - strand, within AO353_03940 at 841.828 kb on - strand, within AO353_03940 at 841.834 kb on - strand, within AO353_03940 at 841.834 kb on - strand, within AO353_03940 at 842.012 kb on + strand, within AO353_03940 at 842.012 kb on + strand, within AO353_03940 at 842.012 kb on + strand, within AO353_03940 at 842.012 kb on + strand, within AO353_03940 at 842.012 kb on + strand, within AO353_03940 at 842.012 kb on + strand, within AO353_03940 at 842.012 kb on + strand, within AO353_03940 at 842.012 kb on + strand, within AO353_03940 at 842.012 kb on + strand, within AO353_03940 at 842.012 kb on + strand, within AO353_03940 at 842.078 kb on + strand, within AO353_03940 at 842.078 kb on + strand, within AO353_03940 at 842.078 kb on + strand, within AO353_03940 at 842.079 kb on - strand, within AO353_03940 at 842.079 kb on - strand, within AO353_03940 at 842.079 kb on - strand, within AO353_03940 at 842.079 kb on - strand, within AO353_03940 at 842.079 kb on - strand, within AO353_03940 at 842.079 kb on - strand, within AO353_03940 at 842.079 kb on - strand, within AO353_03940 at 842.079 kb on - strand, within AO353_03940 at 842.079 kb on - strand, within AO353_03940 at 842.079 kb on - strand, within AO353_03940
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 839,797 + AO353_03925 0.72 -0.3 839,797 + AO353_03925 0.72 -0.2 839,797 + AO353_03925 0.72 +0.7 839,797 + AO353_03925 0.72 -0.5 839,797 + AO353_03925 0.72 -0.2 839,798 - AO353_03925 0.72 -0.0 839,798 - AO353_03925 0.72 -0.3 839,798 - AO353_03925 0.72 -0.1 839,798 - AO353_03925 0.72 -0.8 839,798 - AO353_03925 0.72 -1.0 839,798 - AO353_03925 0.72 +0.7 839,798 - AO353_03925 0.72 +0.3 839,798 - AO353_03925 0.72 +1.9 839,801 + AO353_03925 0.73 -1.3 839,801 + AO353_03925 0.73 -0.4 839,801 + AO353_03925 0.73 -0.7 839,801 + AO353_03925 0.73 -0.1 839,801 + AO353_03925 0.73 +0.9 839,802 - AO353_03925 0.73 +2.3 839,802 - AO353_03925 0.73 +2.3 839,802 - AO353_03925 0.73 +1.0 839,966 + +0.6 839,966 + -0.4 839,970 - -0.4 839,970 - -0.5 839,970 - -1.8 839,970 - -1.2 839,970 - -0.3 839,990 + -0.1 839,990 + +0.0 839,991 - -0.2 839,991 - -1.1 840,015 - -0.7 840,033 + +0.1 840,033 + -0.8 840,033 + +0.4 840,033 + -0.0 840,034 - +0.3 840,034 - -0.4 840,034 - +0.3 840,061 + -0.7 840,733 + -0.3 840,733 + +0.2 840,733 + -0.6 840,733 + +1.4 840,734 - -0.3 840,734 - -1.1 840,734 - -1.5 840,778 + -0.1 840,909 + AO353_03935 0.39 +1.0 840,945 + AO353_03935 0.51 -0.5 840,945 + AO353_03935 0.51 -0.6 840,945 + AO353_03935 0.51 -1.7 840,945 + AO353_03935 0.51 -0.1 840,945 + +2.3 840,945 + AO353_03935 0.51 -1.1 840,946 - AO353_03935 0.52 -0.7 840,946 - AO353_03935 0.52 -1.1 840,946 - AO353_03935 0.52 -0.8 840,962 - AO353_03935 0.57 -0.5 841,029 + AO353_03935 0.80 -0.6 841,087 + -0.7 841,087 + -1.5 841,087 + +2.3 841,087 + -1.5 841,087 + -1.3 841,088 - +1.5 841,088 - -0.1 841,091 + -0.5 841,091 + +0.3 841,091 + -1.1 841,091 + +1.4 841,091 + -0.3 841,091 + -0.1 841,091 + +0.7 841,091 + -0.1 841,092 - -0.3 841,092 - -0.9 841,092 - -0.4 841,092 - +0.3 841,092 - +1.0 841,092 - +0.5 841,108 + -1.5 841,121 - -0.3 841,152 + +0.1 841,152 + +0.3 841,152 + +1.7 841,152 + -0.7 841,153 - +1.7 841,153 - +0.5 841,153 - +0.9 841,153 - -0.3 841,153 - +0.5 841,153 - -0.7 841,153 - +1.7 841,153 - +0.3 841,153 - -1.1 841,156 + -0.9 841,156 + -1.3 841,156 + -1.1 841,156 + +0.7 841,156 + +0.6 841,156 + +0.3 841,156 + +0.3 841,156 + +0.3 841,156 + -1.2 841,156 + -0.8 841,156 + -0.8 841,156 + -1.3 841,157 - -0.1 841,157 - +0.0 841,157 - +0.3 841,157 - -0.5 841,157 - +0.7 841,157 - -1.5 841,157 - -1.5 841,157 - -0.8 841,157 - -2.0 841,157 - -2.5 841,157 - +2.3 841,157 - -0.0 841,157 - -0.1 841,157 - -2.1 841,157 - -0.4 841,157 - +0.5 841,157 - -1.5 841,157 - -1.5 841,157 - -1.3 841,157 - -0.1 841,157 - +3.3 841,157 - -0.5 841,157 - +0.6 841,157 - +0.3 841,157 - -0.3 841,157 - +0.1 841,227 + +1.9 841,227 + +0.7 841,227 + -0.5 841,227 + -0.3 841,261 + -0.1 841,262 - -1.5 841,268 + +0.5 841,269 - -1.2 841,276 + -0.1 841,276 + -1.1 841,276 + +1.3 841,276 + +1.1 841,276 + -1.1 841,276 + +0.9 841,276 + -1.1 841,276 + +2.8 841,276 + +0.1 841,276 + +1.6 841,277 - -0.7 841,277 - +0.8 841,277 - -0.1 841,277 - -0.2 841,277 - -0.7 841,277 - -1.9 841,277 - -0.1 841,281 + +0.5 841,282 - -0.0 841,282 - +1.7 841,284 + -0.2 841,284 + -0.8 841,284 + -0.7 841,284 + -1.1 841,284 + -1.4 841,284 + -1.1 841,284 + +1.7 841,285 - -0.9 841,285 - +0.3 841,285 - -1.5 841,285 - -0.5 841,285 - -1.1 841,285 - +0.3 841,285 - -1.2 841,285 - +2.3 841,285 - -0.1 841,285 - -0.5 841,285 - -0.9 841,285 - -0.2 841,285 - -0.5 841,290 + -1.3 841,290 + +0.8 841,290 + -0.5 841,290 + +0.6 841,291 - +0.3 841,291 - +0.5 841,291 - +0.3 841,291 - -0.2 841,345 + +0.5 841,346 - +0.3 841,358 + -0.7 841,359 - +0.2 841,379 - +0.8 841,379 - -1.8 841,440 + -0.1 841,542 + +0.1 841,542 + -1.7 841,542 + +0.4 841,542 + -2.0 841,542 + +0.0 841,542 + -1.5 841,543 - +0.1 841,543 - -1.6 841,548 + -0.2 841,548 + +0.1 841,548 + -0.1 841,548 + +1.0 841,548 + +0.3 841,548 + +0.5 841,549 - +1.6 841,549 - +0.1 841,549 - +0.3 841,549 - -0.1 841,552 - -0.9 841,552 - +0.2 841,595 - -0.3 841,635 + -1.1 841,635 + -1.8 841,636 - -0.5 841,749 + AO353_03940 0.10 +0.1 841,828 - AO353_03940 0.19 -1.7 841,828 - AO353_03940 0.19 +0.8 841,828 - AO353_03940 0.19 +0.3 841,828 - AO353_03940 0.19 +0.1 841,828 - AO353_03940 0.19 -1.4 841,828 - AO353_03940 0.19 +0.5 841,828 - AO353_03940 0.19 -1.2 841,828 - AO353_03940 0.19 -0.3 841,828 - AO353_03940 0.19 +0.3 841,828 - AO353_03940 0.19 +0.7 841,828 - AO353_03940 0.19 -0.5 841,828 - AO353_03940 0.19 -0.3 841,828 - AO353_03940 0.19 -2.5 841,828 - AO353_03940 0.19 +0.5 841,834 - AO353_03940 0.19 -0.5 841,834 - AO353_03940 0.19 +0.7 842,012 + AO353_03940 0.38 +0.5 842,012 + AO353_03940 0.38 +0.2 842,012 + AO353_03940 0.38 +0.7 842,012 + AO353_03940 0.38 -0.3 842,012 + AO353_03940 0.38 +0.8 842,012 + AO353_03940 0.38 -0.4 842,012 + AO353_03940 0.38 +0.7 842,012 + AO353_03940 0.38 -1.3 842,012 + AO353_03940 0.38 -0.7 842,012 + AO353_03940 0.38 +0.0 842,078 + AO353_03940 0.45 -2.3 842,078 + AO353_03940 0.45 +1.3 842,078 + AO353_03940 0.45 +2.3 842,079 - AO353_03940 0.45 +0.5 842,079 - AO353_03940 0.45 +0.0 842,079 - AO353_03940 0.45 +0.9 842,079 - AO353_03940 0.45 -0.5 842,079 - AO353_03940 0.45 -0.9 842,079 - AO353_03940 0.45 -0.9 842,079 - AO353_03940 0.45 +1.8 842,079 - AO353_03940 0.45 -0.2 842,079 - AO353_03940 0.45 -1.3 842,079 - AO353_03940 0.45 -0.6
Or see this region's nucleotide sequence