Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_03560

Experiment: L-Serine (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntAO353_03555 and AO353_03560 are separated by 38 nucleotidesAO353_03560 and AO353_03565 overlap by 1 nucleotidesAO353_03565 and AO353_03570 are separated by 14 nucleotides AO353_03555: AO353_03555 - translocation protein TolB, at 760,727 to 761,986 _03555 AO353_03560: AO353_03560 - protein TolA, at 762,025 to 763,104 _03560 AO353_03565: AO353_03565 - protein TolR, at 763,104 to 763,565 _03565 AO353_03570: AO353_03570 - protein TolQ, at 763,580 to 764,275 _03570 Position (kb) 762 763 764Strain fitness (log2 ratio) -1 0 1 2at 762.035 kb on - strandat 763.068 kb on - strandat 763.582 kb on - strandat 763.582 kb on - strandat 763.582 kb on - strandat 763.582 kb on - strandat 763.582 kb on - strandat 763.582 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (C)
remove
762,035 - -0.8
763,068 - -0.1
763,582 - +2.2
763,582 - +0.9
763,582 - +2.2
763,582 - -1.4
763,582 - +0.7
763,582 - -0.0

Or see this region's nucleotide sequence