Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03545 and AO353_03550 are separated by 6 nucleotides AO353_03550 and AO353_03555 are separated by 52 nucleotides AO353_03555 and AO353_03560 are separated by 38 nucleotides
AO353_03545: AO353_03545 - hypothetical protein, at 759,337 to 760,170
_03545
AO353_03550: AO353_03550 - peptidoglycan-binding protein, at 760,177 to 760,674
_03550
AO353_03555: AO353_03555 - translocation protein TolB, at 760,727 to 761,986
_03555
AO353_03560: AO353_03560 - protein TolA, at 762,025 to 763,104
_03560
Position (kb) 760
761
762 Strain fitness (log2 ratio) -2
-1
0
1 at 759.783 kb on + strand, within AO353_03545 at 759.846 kb on + strand, within AO353_03545 at 759.898 kb on + strand, within AO353_03545 at 759.899 kb on - strand, within AO353_03545 at 759.899 kb on - strand, within AO353_03545 at 759.899 kb on - strand, within AO353_03545 at 759.899 kb on - strand, within AO353_03545 at 759.899 kb on - strand, within AO353_03545 at 759.899 kb on - strand, within AO353_03545 at 760.019 kb on + strand, within AO353_03545 at 760.032 kb on + strand, within AO353_03545 at 760.032 kb on + strand, within AO353_03545 at 760.038 kb on - strand, within AO353_03545 at 760.071 kb on + strand, within AO353_03545 at 760.071 kb on + strand, within AO353_03545 at 760.071 kb on + strand, within AO353_03545 at 760.071 kb on + strand, within AO353_03545 at 760.071 kb on + strand, within AO353_03545 at 760.071 kb on + strand, within AO353_03545 at 760.072 kb on - strand, within AO353_03545 at 760.072 kb on - strand, within AO353_03545 at 760.072 kb on - strand, within AO353_03545 at 760.072 kb on - strand, within AO353_03545 at 760.072 kb on - strand, within AO353_03545 at 760.072 kb on - strand, within AO353_03545 at 760.072 kb on - strand, within AO353_03545 at 760.147 kb on + strand at 760.147 kb on + strand at 760.147 kb on + strand at 760.148 kb on - strand at 760.148 kb on - strand at 760.178 kb on + strand at 760.178 kb on + strand at 760.178 kb on + strand at 760.178 kb on + strand at 760.178 kb on + strand at 760.179 kb on - strand at 760.179 kb on - strand at 760.179 kb on - strand at 760.179 kb on - strand at 760.182 kb on + strand at 760.183 kb on - strand at 760.183 kb on - strand at 760.183 kb on - strand at 760.183 kb on - strand at 760.183 kb on - strand at 760.687 kb on - strand at 760.687 kb on - strand at 760.705 kb on - strand at 760.705 kb on - strand at 760.705 kb on - strand at 760.705 kb on - strand at 760.705 kb on - strand at 760.709 kb on - strand at 760.709 kb on - strand at 760.738 kb on - strand at 762.035 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 759,783 + AO353_03545 0.53 +0.4 759,846 + AO353_03545 0.61 -1.4 759,898 + AO353_03545 0.67 -0.4 759,899 - AO353_03545 0.67 -0.1 759,899 - AO353_03545 0.67 -2.4 759,899 - AO353_03545 0.67 +1.6 759,899 - AO353_03545 0.67 -1.4 759,899 - AO353_03545 0.67 -0.6 759,899 - AO353_03545 0.67 +0.2 760,019 + AO353_03545 0.82 -2.2 760,032 + AO353_03545 0.83 -0.8 760,032 + AO353_03545 0.83 -0.8 760,038 - AO353_03545 0.84 -1.5 760,071 + AO353_03545 0.88 -0.8 760,071 + AO353_03545 0.88 -0.1 760,071 + AO353_03545 0.88 -1.6 760,071 + AO353_03545 0.88 -0.1 760,071 + AO353_03545 0.88 -1.7 760,071 + AO353_03545 0.88 -0.8 760,072 - AO353_03545 0.88 -2.6 760,072 - AO353_03545 0.88 -1.9 760,072 - AO353_03545 0.88 +1.2 760,072 - AO353_03545 0.88 +1.2 760,072 - AO353_03545 0.88 +0.0 760,072 - AO353_03545 0.88 -1.5 760,072 - AO353_03545 0.88 -0.4 760,147 + -0.3 760,147 + -0.1 760,147 + -1.2 760,148 - -0.6 760,148 - -1.0 760,178 + -0.6 760,178 + -0.6 760,178 + -0.6 760,178 + -0.1 760,178 + -1.0 760,179 - -1.7 760,179 - -0.6 760,179 - -0.2 760,179 - -0.5 760,182 + -1.1 760,183 - +0.8 760,183 - -1.0 760,183 - -0.1 760,183 - -0.4 760,183 - +0.2 760,687 - -0.1 760,687 - -0.2 760,705 - -0.9 760,705 - +0.6 760,705 - +0.2 760,705 - -0.6 760,705 - -0.4 760,709 - +0.2 760,709 - -2.0 760,738 - -0.0 762,035 - -0.8
Or see this region's nucleotide sequence