Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_03510

Experiment: L-Serine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_03505 and AO353_03510 are separated by 41 nucleotidesAO353_03510 and AO353_03515 are separated by 401 nucleotidesAO353_03515 and AO353_03520 are separated by 96 nucleotides AO353_03505: AO353_03505 - serine dehydratase, at 751,274 to 752,650 _03505 AO353_03510: AO353_03510 - glycine cleavage system protein T, at 752,692 to 753,816 _03510 AO353_03515: AO353_03515 - cold-shock protein, at 754,218 to 754,430 _03515 AO353_03520: AO353_03520 - hypothetical protein, at 754,527 to 755,015 _03520 Position (kb) 752 753 754Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6at 751.703 kb on + strand, within AO353_03505at 751.704 kb on - strand, within AO353_03505at 751.704 kb on - strand, within AO353_03505at 751.704 kb on - strand, within AO353_03505at 751.704 kb on - strand, within AO353_03505at 751.771 kb on + strand, within AO353_03505at 751.771 kb on + strand, within AO353_03505at 751.832 kb on + strand, within AO353_03505at 751.832 kb on + strand, within AO353_03505at 751.833 kb on - strand, within AO353_03505at 752.084 kb on + strand, within AO353_03505at 752.084 kb on + strand, within AO353_03505at 752.085 kb on - strand, within AO353_03505at 752.085 kb on - strand, within AO353_03505at 752.085 kb on - strand, within AO353_03505at 752.085 kb on - strand, within AO353_03505at 752.180 kb on + strand, within AO353_03505at 752.180 kb on + strand, within AO353_03505at 752.180 kb on + strand, within AO353_03505at 752.180 kb on + strand, within AO353_03505at 752.180 kb on + strand, within AO353_03505at 752.181 kb on - strand, within AO353_03505at 752.181 kb on - strand, within AO353_03505at 752.181 kb on - strand, within AO353_03505at 752.181 kb on - strand, within AO353_03505at 752.181 kb on - strand, within AO353_03505at 752.183 kb on + strand, within AO353_03505at 752.183 kb on + strand, within AO353_03505at 752.183 kb on + strand, within AO353_03505at 752.183 kb on + strand, within AO353_03505at 752.183 kb on + strand, within AO353_03505at 752.183 kb on + strand, within AO353_03505at 752.183 kb on + strand, within AO353_03505at 752.183 kb on + strand, within AO353_03505at 752.183 kb on + strand, within AO353_03505at 752.183 kb on + strand, within AO353_03505at 752.183 kb on + strand, within AO353_03505at 752.183 kb on + strand, within AO353_03505at 752.183 kb on + strand, within AO353_03505at 752.184 kb on - strand, within AO353_03505at 752.184 kb on - strand, within AO353_03505at 752.184 kb on - strand, within AO353_03505at 752.184 kb on - strand, within AO353_03505at 752.184 kb on - strand, within AO353_03505at 752.184 kb on - strand, within AO353_03505at 752.184 kb on - strand, within AO353_03505at 752.184 kb on - strand, within AO353_03505at 752.184 kb on - strand, within AO353_03505at 752.184 kb on - strand, within AO353_03505at 752.184 kb on - strand, within AO353_03505at 752.184 kb on - strand, within AO353_03505at 752.261 kb on + strand, within AO353_03505at 752.261 kb on + strand, within AO353_03505at 752.261 kb on + strand, within AO353_03505at 752.262 kb on - strand, within AO353_03505at 752.262 kb on - strand, within AO353_03505at 752.262 kb on - strand, within AO353_03505at 752.262 kb on - strand, within AO353_03505at 752.601 kb on - strandat 752.601 kb on - strandat 752.601 kb on - strandat 752.691 kb on + strandat 752.691 kb on + strandat 752.691 kb on + strandat 752.691 kb on + strandat 752.691 kb on + strandat 752.691 kb on + strandat 752.691 kb on + strandat 752.691 kb on + strandat 752.691 kb on + strandat 752.691 kb on + strandat 752.691 kb on + strandat 752.691 kb on + strandat 752.691 kb on + strandat 752.691 kb on + strandat 752.691 kb on + strandat 752.691 kb on + strandat 752.691 kb on + strandat 752.691 kb on + strandat 752.692 kb on - strandat 752.692 kb on - strandat 752.692 kb on - strandat 752.692 kb on - strandat 752.692 kb on - strandat 752.692 kb on - strandat 752.692 kb on - strandat 752.692 kb on - strandat 752.692 kb on - strandat 752.692 kb on - strandat 752.692 kb on - strandat 752.692 kb on - strandat 752.692 kb on - strandat 752.692 kb on - strandat 752.692 kb on - strandat 752.692 kb on - strandat 752.692 kb on - strandat 752.692 kb on - strandat 752.692 kb on - strandat 752.692 kb on - strandat 752.773 kb on + strandat 752.956 kb on + strand, within AO353_03510at 753.410 kb on - strand, within AO353_03510at 753.472 kb on - strand, within AO353_03510at 753.472 kb on - strand, within AO353_03510at 753.527 kb on + strand, within AO353_03510at 753.712 kb on + strandat 753.712 kb on + strandat 753.712 kb on + strandat 753.712 kb on + strandat 753.712 kb on + strandat 753.712 kb on + strandat 753.712 kb on + strandat 753.712 kb on + strandat 753.712 kb on + strandat 753.712 kb on + strandat 753.712 kb on + strandat 753.712 kb on + strandat 753.712 kb on + strandat 753.712 kb on + strandat 753.712 kb on + strandat 753.713 kb on - strandat 753.713 kb on - strandat 753.713 kb on - strandat 753.713 kb on - strandat 753.713 kb on - strandat 753.713 kb on - strandat 753.713 kb on - strandat 753.713 kb on - strandat 753.713 kb on - strandat 753.746 kb on + strandat 753.746 kb on + strandat 753.746 kb on + strandat 753.746 kb on + strandat 753.746 kb on + strandat 753.746 kb on + strandat 753.747 kb on - strandat 753.747 kb on - strandat 753.747 kb on - strandat 753.747 kb on - strandat 753.747 kb on - strandat 753.747 kb on - strandat 753.747 kb on - strandat 753.747 kb on - strandat 753.773 kb on + strandat 753.774 kb on - strandat 753.802 kb on + strandat 753.802 kb on + strandat 753.803 kb on - strandat 753.803 kb on - strandat 753.803 kb on - strandat 753.803 kb on - strandat 753.803 kb on - strandat 753.828 kb on + strandat 753.828 kb on + strandat 753.829 kb on - strandat 753.829 kb on - strandat 753.830 kb on + strandat 753.830 kb on + strandat 753.831 kb on - strandat 753.831 kb on - strandat 753.831 kb on - strandat 753.835 kb on - strandat 753.858 kb on + strandat 753.859 kb on - strandat 753.891 kb on + strandat 753.891 kb on + strandat 753.926 kb on + strandat 753.926 kb on + strandat 753.926 kb on + strandat 753.929 kb on - strandat 753.955 kb on + strandat 754.041 kb on + strandat 754.051 kb on - strandat 754.103 kb on + strandat 754.108 kb on + strandat 754.108 kb on + strandat 754.109 kb on - strandat 754.109 kb on - strandat 754.109 kb on - strandat 754.115 kb on + strandat 754.115 kb on + strandat 754.115 kb on + strandat 754.115 kb on + strandat 754.115 kb on + strandat 754.115 kb on + strandat 754.116 kb on - strandat 754.116 kb on - strandat 754.119 kb on + strandat 754.119 kb on + strandat 754.119 kb on + strandat 754.119 kb on + strandat 754.120 kb on - strandat 754.120 kb on - strandat 754.120 kb on - strandat 754.120 kb on - strandat 754.120 kb on - strandat 754.140 kb on + strandat 754.140 kb on + strandat 754.140 kb on + strandat 754.140 kb on + strandat 754.140 kb on + strandat 754.141 kb on - strandat 754.141 kb on - strandat 754.164 kb on - strandat 754.164 kb on - strandat 754.212 kb on + strandat 754.253 kb on + strand, within AO353_03515at 754.277 kb on + strand, within AO353_03515at 754.278 kb on - strand, within AO353_03515at 754.331 kb on + strand, within AO353_03515at 754.414 kb on + strandat 754.415 kb on - strandat 754.602 kb on + strand, within AO353_03520at 754.650 kb on + strand, within AO353_03520at 754.650 kb on + strand, within AO353_03520at 754.650 kb on + strand, within AO353_03520at 754.650 kb on + strand, within AO353_03520at 754.650 kb on + strand, within AO353_03520at 754.651 kb on - strand, within AO353_03520at 754.651 kb on - strand, within AO353_03520

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (C)
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751,703 + AO353_03505 0.31 -0.4
751,704 - AO353_03505 0.31 +0.2
751,704 - AO353_03505 0.31 -1.5
751,704 - AO353_03505 0.31 -1.3
751,704 - AO353_03505 0.31 +5.6
751,771 + AO353_03505 0.36 +0.2
751,771 + AO353_03505 0.36 -1.7
751,832 + AO353_03505 0.41 +2.2
751,832 + AO353_03505 0.41 +0.2
751,833 - AO353_03505 0.41 +0.4
752,084 + AO353_03505 0.59 -1.5
752,084 + AO353_03505 0.59 -1.1
752,085 - AO353_03505 0.59 -1.3
752,085 - AO353_03505 0.59 -0.4
752,085 - AO353_03505 0.59 -1.5
752,085 - AO353_03505 0.59 -1.7
752,180 + AO353_03505 0.66 -1.8
752,180 + AO353_03505 0.66 -0.9
752,180 + AO353_03505 0.66 -0.4
752,180 + AO353_03505 0.66 +0.4
752,180 + AO353_03505 0.66 -1.3
752,181 - AO353_03505 0.66 -1.3
752,181 - AO353_03505 0.66 -0.5
752,181 - AO353_03505 0.66 -1.4
752,181 - AO353_03505 0.66 -1.4
752,181 - AO353_03505 0.66 -1.4
752,183 + AO353_03505 0.66 -1.9
752,183 + AO353_03505 0.66 -0.5
752,183 + AO353_03505 0.66 -1.9
752,183 + AO353_03505 0.66 -2.3
752,183 + AO353_03505 0.66 +0.0
752,183 + AO353_03505 0.66 -2.4
752,183 + AO353_03505 0.66 -0.1
752,183 + AO353_03505 0.66 -1.4
752,183 + AO353_03505 0.66 -0.6
752,183 + AO353_03505 0.66 -0.1
752,183 + AO353_03505 0.66 -2.1
752,183 + AO353_03505 0.66 -1.0
752,183 + AO353_03505 0.66 -2.7
752,184 - AO353_03505 0.66 +0.2
752,184 - AO353_03505 0.66 +0.0
752,184 - AO353_03505 0.66 -0.8
752,184 - AO353_03505 0.66 -1.4
752,184 - AO353_03505 0.66 +2.2
752,184 - AO353_03505 0.66 -1.9
752,184 - AO353_03505 0.66 -0.8
752,184 - AO353_03505 0.66 -1.3
752,184 - AO353_03505 0.66 -0.6
752,184 - AO353_03505 0.66 -0.5
752,184 - AO353_03505 0.66 -0.5
752,184 - AO353_03505 0.66 -0.8
752,261 + AO353_03505 0.72 -2.0
752,261 + AO353_03505 0.72 +0.0
752,261 + AO353_03505 0.72 -0.4
752,262 - AO353_03505 0.72 -1.3
752,262 - AO353_03505 0.72 -1.6
752,262 - AO353_03505 0.72 -0.6
752,262 - AO353_03505 0.72 -0.7
752,601 - -1.5
752,601 - +0.6
752,601 - -1.5
752,691 + +0.6
752,691 + +0.6
752,691 + +2.2
752,691 + +1.1
752,691 + +0.7
752,691 + +0.5
752,691 + +0.2
752,691 + +1.6
752,691 + +1.9
752,691 + +0.9
752,691 + +0.8
752,691 + -1.2
752,691 + +1.3
752,691 + +1.2
752,691 + +1.9
752,691 + +1.4
752,691 + +1.0
752,691 + +0.4
752,692 - +1.8
752,692 - +0.9
752,692 - +3.0
752,692 - +2.1
752,692 - +1.6
752,692 - +1.8
752,692 - +2.1
752,692 - +2.7
752,692 - +1.8
752,692 - +1.8
752,692 - +1.6
752,692 - +1.8
752,692 - +2.5
752,692 - +2.6
752,692 - +2.4
752,692 - +1.2
752,692 - +2.9
752,692 - +2.8
752,692 - +2.2
752,692 - +1.8
752,773 + +1.2
752,956 + AO353_03510 0.23 +4.2
753,410 - AO353_03510 0.64 +4.9
753,472 - AO353_03510 0.69 +4.4
753,472 - AO353_03510 0.69 +4.5
753,527 + AO353_03510 0.74 +3.9
753,712 + +3.8
753,712 + +3.3
753,712 + +2.1
753,712 + +3.4
753,712 + +6.1
753,712 + +3.8
753,712 + +4.8
753,712 + +3.9
753,712 + +3.3
753,712 + +5.8
753,712 + +3.9
753,712 + +3.9
753,712 + +4.2
753,712 + +4.3
753,712 + +4.0
753,713 - +4.4
753,713 - +4.8
753,713 - +4.7
753,713 - +5.5
753,713 - +4.0
753,713 - +4.5
753,713 - +4.8
753,713 - +4.7
753,713 - +4.9
753,746 + +4.2
753,746 + +4.5
753,746 + +4.6
753,746 + +3.9
753,746 + +3.7
753,746 + +4.6
753,747 - +4.3
753,747 - +4.8
753,747 - +5.0
753,747 - +4.3
753,747 - +5.1
753,747 - +4.3
753,747 - +5.7
753,747 - +5.2
753,773 + +5.4
753,774 - +4.8
753,802 + +2.3
753,802 + +2.5
753,803 - +4.2
753,803 - +5.2
753,803 - +3.8
753,803 - +4.5
753,803 - +5.1
753,828 + -0.6
753,828 + +1.0
753,829 - +0.6
753,829 - +0.5
753,830 + +0.2
753,830 + -0.1
753,831 - +2.9
753,831 - +0.2
753,831 - +1.0
753,835 - +1.7
753,858 + +1.2
753,859 - -0.0
753,891 + +0.6
753,891 + +0.4
753,926 + +0.5
753,926 + +1.2
753,926 + -1.7
753,929 - -0.1
753,955 + +0.6
754,041 + +1.5
754,051 - +0.0
754,103 + +1.9
754,108 + +0.9
754,108 + +1.1
754,109 - +0.9
754,109 - +1.5
754,109 - +1.0
754,115 + +1.0
754,115 + +0.2
754,115 + +1.8
754,115 + -0.3
754,115 + +0.4
754,115 + +1.5
754,116 - +0.6
754,116 - -0.6
754,119 + -0.2
754,119 + +1.8
754,119 + +0.1
754,119 + +2.5
754,120 - -0.0
754,120 - +0.8
754,120 - +0.6
754,120 - +0.9
754,120 - +0.8
754,140 + +2.3
754,140 + +1.3
754,140 + +1.6
754,140 + +1.7
754,140 + -1.8
754,141 - +2.0
754,141 - +0.4
754,164 - +0.9
754,164 - +2.0
754,212 + -0.3
754,253 + AO353_03515 0.16 +0.2
754,277 + AO353_03515 0.28 +0.8
754,278 - AO353_03515 0.28 +0.6
754,331 + AO353_03515 0.53 +0.8
754,414 + +0.6
754,415 - +0.5
754,602 + AO353_03520 0.15 -0.5
754,650 + AO353_03520 0.25 +1.1
754,650 + AO353_03520 0.25 -0.4
754,650 + AO353_03520 0.25 +1.8
754,650 + AO353_03520 0.25 +0.9
754,650 + AO353_03520 0.25 -0.9
754,651 - AO353_03520 0.25 +0.8
754,651 - AO353_03520 0.25 -2.1

Or see this region's nucleotide sequence