Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03095 and AO353_03100 are separated by 94 nucleotides AO353_03100 and AO353_03105 are separated by 30 nucleotides AO353_03105 and AO353_03110 are separated by 83 nucleotides
AO353_03095: AO353_03095 - hypothetical protein, at 664,312 to 665,271
_03095
AO353_03100: AO353_03100 - XRE family transcriptional regulator, at 665,366 to 665,683
_03100
AO353_03105: AO353_03105 - XRE family transcriptional regulator, at 665,714 to 666,034
_03105
AO353_03110: AO353_03110 - hydrolase, at 666,118 to 667,173
_03110
Position (kb)
665
666 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 664.504 kb on + strand, within AO353_03095 at 664.504 kb on + strand, within AO353_03095 at 664.504 kb on + strand, within AO353_03095 at 664.504 kb on + strand, within AO353_03095 at 664.504 kb on + strand, within AO353_03095 at 664.504 kb on + strand, within AO353_03095 at 664.504 kb on + strand, within AO353_03095 at 664.504 kb on + strand, within AO353_03095 at 664.504 kb on + strand, within AO353_03095 at 664.505 kb on - strand, within AO353_03095 at 664.505 kb on - strand, within AO353_03095 at 664.505 kb on - strand, within AO353_03095 at 664.505 kb on - strand, within AO353_03095 at 664.505 kb on - strand, within AO353_03095 at 664.505 kb on - strand, within AO353_03095 at 664.505 kb on - strand, within AO353_03095 at 664.549 kb on - strand, within AO353_03095 at 664.564 kb on + strand, within AO353_03095 at 664.564 kb on + strand, within AO353_03095 at 664.564 kb on + strand, within AO353_03095 at 664.564 kb on + strand, within AO353_03095 at 664.565 kb on - strand, within AO353_03095 at 664.565 kb on - strand, within AO353_03095 at 664.660 kb on + strand, within AO353_03095 at 664.660 kb on + strand, within AO353_03095 at 664.660 kb on + strand, within AO353_03095 at 664.660 kb on + strand, within AO353_03095 at 664.660 kb on + strand, within AO353_03095 at 664.660 kb on + strand, within AO353_03095 at 664.660 kb on + strand, within AO353_03095 at 664.661 kb on - strand, within AO353_03095 at 664.661 kb on - strand, within AO353_03095 at 664.661 kb on - strand, within AO353_03095 at 664.661 kb on - strand, within AO353_03095 at 664.661 kb on - strand, within AO353_03095 at 664.661 kb on - strand, within AO353_03095 at 664.661 kb on - strand, within AO353_03095 at 664.661 kb on - strand, within AO353_03095 at 664.879 kb on + strand, within AO353_03095 at 664.879 kb on + strand, within AO353_03095 at 664.879 kb on + strand, within AO353_03095 at 664.880 kb on - strand, within AO353_03095 at 664.880 kb on - strand, within AO353_03095 at 664.880 kb on - strand, within AO353_03095 at 664.933 kb on + strand, within AO353_03095 at 664.934 kb on - strand, within AO353_03095 at 664.934 kb on - strand, within AO353_03095 at 664.934 kb on - strand, within AO353_03095 at 664.934 kb on - strand, within AO353_03095 at 664.963 kb on + strand, within AO353_03095 at 664.963 kb on + strand, within AO353_03095 at 664.963 kb on + strand, within AO353_03095 at 664.963 kb on + strand, within AO353_03095 at 664.963 kb on + strand, within AO353_03095 at 664.964 kb on - strand, within AO353_03095 at 664.964 kb on - strand, within AO353_03095 at 664.964 kb on - strand, within AO353_03095 at 664.964 kb on - strand, within AO353_03095 at 665.020 kb on + strand, within AO353_03095 at 665.021 kb on - strand, within AO353_03095 at 665.035 kb on + strand, within AO353_03095 at 665.035 kb on + strand, within AO353_03095 at 665.036 kb on - strand, within AO353_03095 at 665.036 kb on - strand, within AO353_03095 at 665.036 kb on - strand, within AO353_03095 at 665.062 kb on + strand, within AO353_03095 at 665.093 kb on + strand, within AO353_03095 at 665.093 kb on + strand, within AO353_03095 at 665.093 kb on + strand, within AO353_03095 at 665.093 kb on + strand, within AO353_03095 at 665.094 kb on - strand, within AO353_03095 at 665.094 kb on - strand, within AO353_03095 at 665.094 kb on - strand, within AO353_03095 at 665.125 kb on + strand, within AO353_03095 at 665.125 kb on + strand, within AO353_03095 at 665.125 kb on + strand, within AO353_03095 at 665.125 kb on + strand, within AO353_03095 at 665.125 kb on + strand, within AO353_03095 at 665.126 kb on - strand, within AO353_03095 at 665.126 kb on - strand, within AO353_03095 at 665.126 kb on - strand, within AO353_03095 at 665.126 kb on - strand, within AO353_03095 at 665.126 kb on - strand, within AO353_03095 at 665.126 kb on - strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.137 kb on + strand, within AO353_03095 at 665.138 kb on - strand, within AO353_03095 at 665.138 kb on - strand, within AO353_03095 at 665.138 kb on - strand, within AO353_03095 at 665.138 kb on - strand, within AO353_03095 at 665.138 kb on - strand, within AO353_03095 at 665.138 kb on - strand, within AO353_03095 at 665.238 kb on + strand at 665.238 kb on + strand at 665.238 kb on + strand at 665.269 kb on + strand at 665.269 kb on + strand at 665.270 kb on - strand at 665.270 kb on - strand at 665.270 kb on - strand at 665.270 kb on - strand at 665.270 kb on - strand at 665.340 kb on - strand at 665.340 kb on - strand at 665.495 kb on - strand, within AO353_03100 at 665.565 kb on - strand, within AO353_03100 at 665.639 kb on - strand, within AO353_03100 at 665.697 kb on - strand at 665.698 kb on + strand at 665.699 kb on - strand at 665.699 kb on - strand at 665.709 kb on + strand at 665.709 kb on + strand at 665.710 kb on - strand at 665.710 kb on - strand at 665.744 kb on - strand at 665.748 kb on - strand, within AO353_03105 at 665.748 kb on - strand, within AO353_03105 at 665.748 kb on - strand, within AO353_03105 at 665.748 kb on - strand, within AO353_03105 at 665.748 kb on - strand, within AO353_03105 at 665.757 kb on + strand, within AO353_03105 at 665.757 kb on + strand, within AO353_03105 at 665.757 kb on + strand, within AO353_03105 at 665.788 kb on + strand, within AO353_03105 at 665.789 kb on - strand, within AO353_03105 at 665.789 kb on - strand, within AO353_03105 at 665.823 kb on + strand, within AO353_03105 at 665.823 kb on + strand, within AO353_03105 at 665.823 kb on + strand, within AO353_03105 at 665.824 kb on - strand, within AO353_03105 at 665.824 kb on - strand, within AO353_03105 at 665.967 kb on + strand, within AO353_03105 at 665.967 kb on + strand, within AO353_03105 at 665.967 kb on + strand, within AO353_03105 at 665.967 kb on + strand, within AO353_03105 at 665.967 kb on + strand, within AO353_03105 at 665.967 kb on + strand, within AO353_03105 at 665.968 kb on - strand, within AO353_03105 at 665.968 kb on - strand, within AO353_03105 at 665.968 kb on - strand, within AO353_03105 at 665.968 kb on - strand, within AO353_03105 at 665.968 kb on - strand, within AO353_03105 at 665.968 kb on - strand, within AO353_03105 at 665.968 kb on - strand, within AO353_03105 at 666.035 kb on + strand at 666.074 kb on + strand at 666.075 kb on - strand at 666.105 kb on + strand at 666.106 kb on - strand at 666.106 kb on - strand at 666.106 kb on - strand at 666.111 kb on + strand at 666.111 kb on + strand at 666.111 kb on + strand at 666.111 kb on + strand at 666.111 kb on + strand at 666.111 kb on + strand at 666.111 kb on + strand at 666.111 kb on + strand at 666.111 kb on + strand at 666.111 kb on + strand at 666.112 kb on - strand at 666.112 kb on - strand at 666.112 kb on - strand at 666.112 kb on - strand at 666.112 kb on - strand at 666.112 kb on - strand at 666.112 kb on - strand at 666.112 kb on - strand at 666.112 kb on - strand at 666.112 kb on - strand at 666.112 kb on - strand at 666.119 kb on + strand at 666.120 kb on - strand at 666.120 kb on - strand at 666.120 kb on - strand at 666.123 kb on + strand at 666.123 kb on + strand at 666.123 kb on + strand at 666.124 kb on - strand at 666.124 kb on - strand at 666.124 kb on - strand at 666.124 kb on - strand at 666.124 kb on - strand at 666.124 kb on - strand at 666.124 kb on - strand at 666.404 kb on + strand, within AO353_03110 at 666.405 kb on - strand, within AO353_03110 at 666.405 kb on - strand, within AO353_03110 at 666.477 kb on - strand, within AO353_03110
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 664,504 + AO353_03095 0.20 -0.8 664,504 + AO353_03095 0.20 -0.0 664,504 + AO353_03095 0.20 -0.8 664,504 + AO353_03095 0.20 -0.2 664,504 + AO353_03095 0.20 +0.2 664,504 + AO353_03095 0.20 +1.2 664,504 + AO353_03095 0.20 -0.2 664,504 + AO353_03095 0.20 +0.2 664,504 + AO353_03095 0.20 -0.4 664,505 - AO353_03095 0.20 +0.3 664,505 - AO353_03095 0.20 -1.0 664,505 - AO353_03095 0.20 -0.3 664,505 - AO353_03095 0.20 -0.6 664,505 - AO353_03095 0.20 +1.0 664,505 - AO353_03095 0.20 +0.9 664,505 - AO353_03095 0.20 -1.0 664,549 - AO353_03095 0.25 -0.9 664,564 + AO353_03095 0.26 -0.6 664,564 + AO353_03095 0.26 -0.2 664,564 + AO353_03095 0.26 +0.6 664,564 + AO353_03095 0.26 -1.0 664,565 - AO353_03095 0.26 -0.2 664,565 - AO353_03095 0.26 -0.6 664,660 + AO353_03095 0.36 +0.2 664,660 + AO353_03095 0.36 -0.6 664,660 + AO353_03095 0.36 -0.0 664,660 + AO353_03095 0.36 -0.3 664,660 + AO353_03095 0.36 -1.0 664,660 + AO353_03095 0.36 -2.7 664,660 + AO353_03095 0.36 +0.8 664,661 - AO353_03095 0.36 -1.0 664,661 - AO353_03095 0.36 +0.2 664,661 - AO353_03095 0.36 -0.3 664,661 - AO353_03095 0.36 +1.8 664,661 - AO353_03095 0.36 -0.6 664,661 - AO353_03095 0.36 -1.0 664,661 - AO353_03095 0.36 -0.5 664,661 - AO353_03095 0.36 -0.9 664,879 + AO353_03095 0.59 -0.5 664,879 + AO353_03095 0.59 -0.6 664,879 + AO353_03095 0.59 -1.2 664,880 - AO353_03095 0.59 +0.2 664,880 - AO353_03095 0.59 -0.5 664,880 - AO353_03095 0.59 +0.6 664,933 + AO353_03095 0.65 -0.2 664,934 - AO353_03095 0.65 -1.1 664,934 - AO353_03095 0.65 -1.5 664,934 - AO353_03095 0.65 -0.4 664,934 - AO353_03095 0.65 -0.8 664,963 + AO353_03095 0.68 -0.3 664,963 + AO353_03095 0.68 -1.1 664,963 + AO353_03095 0.68 -0.2 664,963 + AO353_03095 0.68 +0.6 664,963 + AO353_03095 0.68 +0.7 664,964 - AO353_03095 0.68 +0.2 664,964 - AO353_03095 0.68 +0.2 664,964 - AO353_03095 0.68 +0.6 664,964 - AO353_03095 0.68 -1.5 665,020 + AO353_03095 0.74 +0.4 665,021 - AO353_03095 0.74 -1.2 665,035 + AO353_03095 0.75 +0.4 665,035 + AO353_03095 0.75 -1.3 665,036 - AO353_03095 0.75 -0.5 665,036 - AO353_03095 0.75 -1.1 665,036 - AO353_03095 0.75 -1.2 665,062 + AO353_03095 0.78 -1.4 665,093 + AO353_03095 0.81 +0.2 665,093 + AO353_03095 0.81 -0.6 665,093 + AO353_03095 0.81 -0.0 665,093 + AO353_03095 0.81 -0.4 665,094 - AO353_03095 0.81 +1.8 665,094 - AO353_03095 0.81 -0.2 665,094 - AO353_03095 0.81 +0.6 665,125 + AO353_03095 0.85 -1.3 665,125 + AO353_03095 0.85 -0.5 665,125 + AO353_03095 0.85 -0.9 665,125 + AO353_03095 0.85 -0.4 665,125 + AO353_03095 0.85 -2.3 665,126 - AO353_03095 0.85 -1.2 665,126 - AO353_03095 0.85 -1.3 665,126 - AO353_03095 0.85 -0.1 665,126 - AO353_03095 0.85 +0.6 665,126 - AO353_03095 0.85 -1.8 665,126 - AO353_03095 0.85 +0.3 665,137 + AO353_03095 0.86 +0.6 665,137 + AO353_03095 0.86 -0.8 665,137 + AO353_03095 0.86 +0.1 665,137 + AO353_03095 0.86 +1.4 665,137 + AO353_03095 0.86 -1.0 665,137 + AO353_03095 0.86 +0.6 665,137 + AO353_03095 0.86 +0.5 665,137 + AO353_03095 0.86 -0.8 665,137 + AO353_03095 0.86 +0.6 665,137 + AO353_03095 0.86 -1.3 665,137 + AO353_03095 0.86 +0.6 665,137 + AO353_03095 0.86 +0.8 665,138 - AO353_03095 0.86 -1.6 665,138 - AO353_03095 0.86 -0.4 665,138 - AO353_03095 0.86 -0.6 665,138 - AO353_03095 0.86 +0.3 665,138 - AO353_03095 0.86 +1.2 665,138 - AO353_03095 0.86 -0.4 665,238 + -0.6 665,238 + -1.3 665,238 + +0.4 665,269 + -2.1 665,269 + +0.4 665,270 - -0.6 665,270 - +1.5 665,270 - +0.4 665,270 - +0.2 665,270 - +0.3 665,340 - +1.2 665,340 - -0.0 665,495 - AO353_03100 0.41 -0.8 665,565 - AO353_03100 0.63 -0.4 665,639 - AO353_03100 0.86 -0.6 665,697 - +0.2 665,698 + -1.0 665,699 - +0.6 665,699 - -0.7 665,709 + +0.2 665,709 + -1.8 665,710 - -0.5 665,710 - -1.2 665,744 - -1.4 665,748 - AO353_03105 0.11 +1.2 665,748 - AO353_03105 0.11 -1.8 665,748 - AO353_03105 0.11 -0.8 665,748 - AO353_03105 0.11 -0.0 665,748 - AO353_03105 0.11 -0.6 665,757 + AO353_03105 0.13 -0.2 665,757 + AO353_03105 0.13 -0.8 665,757 + AO353_03105 0.13 +1.5 665,788 + AO353_03105 0.23 +1.3 665,789 - AO353_03105 0.23 -0.6 665,789 - AO353_03105 0.23 -0.1 665,823 + AO353_03105 0.34 +0.8 665,823 + AO353_03105 0.34 -0.4 665,823 + AO353_03105 0.34 -0.2 665,824 - AO353_03105 0.34 -1.3 665,824 - AO353_03105 0.34 +1.4 665,967 + AO353_03105 0.79 +0.6 665,967 + AO353_03105 0.79 -1.5 665,967 + AO353_03105 0.79 +0.8 665,967 + AO353_03105 0.79 -1.0 665,967 + AO353_03105 0.79 +0.3 665,967 + AO353_03105 0.79 -0.4 665,968 - AO353_03105 0.79 -1.0 665,968 - AO353_03105 0.79 +0.4 665,968 - AO353_03105 0.79 +0.6 665,968 - AO353_03105 0.79 -1.9 665,968 - AO353_03105 0.79 -1.5 665,968 - AO353_03105 0.79 -0.6 665,968 - AO353_03105 0.79 +0.5 666,035 + -0.6 666,074 + +0.5 666,075 - -0.4 666,105 + -0.5 666,106 - -1.3 666,106 - +2.0 666,106 - +1.8 666,111 + -0.0 666,111 + +1.2 666,111 + -1.5 666,111 + -1.4 666,111 + +0.8 666,111 + +0.4 666,111 + +1.2 666,111 + -0.4 666,111 + +0.6 666,111 + +0.5 666,112 - -0.5 666,112 - -1.3 666,112 - +0.2 666,112 - -0.4 666,112 - -0.2 666,112 - +0.4 666,112 - -0.4 666,112 - +3.2 666,112 - -0.2 666,112 - -1.1 666,112 - +0.4 666,119 + -0.4 666,120 - -0.6 666,120 - -0.4 666,120 - -0.6 666,123 + +1.2 666,123 + -0.2 666,123 + -1.2 666,124 - -0.2 666,124 - +0.2 666,124 - -0.2 666,124 - +0.2 666,124 - +0.6 666,124 - +1.2 666,124 - -1.5 666,404 + AO353_03110 0.27 +0.2 666,405 - AO353_03110 0.27 +0.6 666,405 - AO353_03110 0.27 +1.0 666,477 - AO353_03110 0.34 -0.4
Or see this region's nucleotide sequence