Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02830 and AO353_02835 overlap by 4 nucleotides AO353_02835 and AO353_02840 are separated by 730 nucleotides
AO353_02830: AO353_02830 - histidine kinase, at 599,830 to 601,440
_02830
AO353_02835: AO353_02835 - chemotaxis protein CheY, at 601,437 to 602,162
_02835
AO353_02840: AO353_02840 - ribonucleotide-diphosphate reductase subunit alpha, at 602,893 to 605,787
_02840
Position (kb) 601
602
603 Strain fitness (log2 ratio) -2
-1
0
1
2 at 600.689 kb on + strand, within AO353_02830 at 600.689 kb on + strand, within AO353_02830 at 600.689 kb on + strand, within AO353_02830 at 600.689 kb on + strand, within AO353_02830 at 600.689 kb on + strand, within AO353_02830 at 600.690 kb on - strand, within AO353_02830 at 600.733 kb on + strand, within AO353_02830 at 600.734 kb on - strand, within AO353_02830 at 600.734 kb on - strand, within AO353_02830 at 600.915 kb on + strand, within AO353_02830 at 601.019 kb on + strand, within AO353_02830 at 601.019 kb on + strand, within AO353_02830 at 601.019 kb on + strand, within AO353_02830 at 601.019 kb on + strand, within AO353_02830 at 601.019 kb on + strand, within AO353_02830 at 601.020 kb on - strand, within AO353_02830 at 601.020 kb on - strand, within AO353_02830 at 601.087 kb on - strand, within AO353_02830 at 601.104 kb on - strand, within AO353_02830 at 601.369 kb on + strand at 601.369 kb on + strand at 601.369 kb on + strand at 601.370 kb on - strand at 601.415 kb on + strand at 601.416 kb on - strand at 601.416 kb on - strand at 601.416 kb on - strand at 601.416 kb on - strand at 601.452 kb on + strand at 601.452 kb on + strand at 601.452 kb on + strand at 601.452 kb on + strand at 601.453 kb on - strand at 601.453 kb on - strand at 601.453 kb on - strand at 601.453 kb on - strand at 601.453 kb on - strand at 601.453 kb on - strand at 601.453 kb on - strand at 601.453 kb on - strand at 601.477 kb on + strand at 601.478 kb on - strand at 601.478 kb on - strand at 601.858 kb on + strand, within AO353_02835 at 601.858 kb on + strand, within AO353_02835 at 601.858 kb on + strand, within AO353_02835 at 601.858 kb on + strand, within AO353_02835 at 601.858 kb on + strand, within AO353_02835 at 601.858 kb on + strand, within AO353_02835 at 601.858 kb on + strand, within AO353_02835 at 601.859 kb on - strand, within AO353_02835 at 601.859 kb on - strand, within AO353_02835 at 601.859 kb on - strand, within AO353_02835 at 601.859 kb on - strand, within AO353_02835 at 601.859 kb on - strand, within AO353_02835 at 601.859 kb on - strand, within AO353_02835 at 601.859 kb on - strand, within AO353_02835 at 601.859 kb on - strand, within AO353_02835 at 601.859 kb on - strand, within AO353_02835 at 601.859 kb on - strand, within AO353_02835 at 601.939 kb on + strand, within AO353_02835 at 601.939 kb on + strand, within AO353_02835 at 601.940 kb on - strand, within AO353_02835 at 601.940 kb on - strand, within AO353_02835 at 602.027 kb on + strand, within AO353_02835 at 602.093 kb on - strand at 602.093 kb on - strand at 602.093 kb on - strand at 602.139 kb on + strand at 602.139 kb on + strand at 602.140 kb on - strand at 602.185 kb on + strand at 602.185 kb on + strand at 602.185 kb on + strand at 602.185 kb on + strand at 602.185 kb on + strand at 602.186 kb on - strand at 602.188 kb on + strand at 602.188 kb on + strand at 602.189 kb on - strand at 602.189 kb on - strand at 602.214 kb on + strand at 602.215 kb on - strand at 602.215 kb on - strand at 602.230 kb on + strand at 602.230 kb on + strand at 602.231 kb on - strand at 602.231 kb on - strand at 602.231 kb on - strand at 602.240 kb on + strand at 602.240 kb on + strand at 602.241 kb on - strand at 602.257 kb on + strand at 602.257 kb on + strand at 602.257 kb on + strand at 602.257 kb on + strand at 602.257 kb on + strand at 602.258 kb on - strand at 602.258 kb on - strand at 602.258 kb on - strand at 602.258 kb on - strand at 602.322 kb on - strand at 602.322 kb on - strand at 602.354 kb on + strand at 602.409 kb on + strand at 602.431 kb on + strand at 602.441 kb on - strand at 602.441 kb on - strand at 602.462 kb on + strand at 602.463 kb on - strand at 602.465 kb on + strand at 602.465 kb on + strand at 602.465 kb on + strand at 602.465 kb on + strand at 602.493 kb on + strand at 602.493 kb on + strand at 602.522 kb on + strand at 602.522 kb on + strand at 602.522 kb on + strand at 602.528 kb on + strand at 602.528 kb on + strand at 602.610 kb on + strand at 602.696 kb on + strand at 602.696 kb on + strand at 602.801 kb on + strand at 602.823 kb on + strand at 602.823 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 600,689 + AO353_02830 0.53 +0.4 600,689 + AO353_02830 0.53 +0.1 600,689 + AO353_02830 0.53 -1.0 600,689 + AO353_02830 0.53 -0.4 600,689 + AO353_02830 0.53 +1.0 600,690 - AO353_02830 0.53 +0.1 600,733 + AO353_02830 0.56 -0.7 600,734 - AO353_02830 0.56 -0.2 600,734 - AO353_02830 0.56 +0.2 600,915 + AO353_02830 0.67 +0.3 601,019 + AO353_02830 0.74 +0.7 601,019 + AO353_02830 0.74 -0.4 601,019 + AO353_02830 0.74 +0.1 601,019 + AO353_02830 0.74 -0.7 601,019 + AO353_02830 0.74 +0.8 601,020 - AO353_02830 0.74 -0.4 601,020 - AO353_02830 0.74 -2.3 601,087 - AO353_02830 0.78 -0.4 601,104 - AO353_02830 0.79 +0.6 601,369 + +0.8 601,369 + +1.3 601,369 + +1.0 601,370 - -0.9 601,415 + -1.4 601,416 - +0.7 601,416 - +0.2 601,416 - +0.7 601,416 - -0.3 601,452 + +0.6 601,452 + -0.4 601,452 + +0.5 601,452 + -0.1 601,453 - +2.4 601,453 - +0.6 601,453 - +0.9 601,453 - -0.2 601,453 - -0.3 601,453 - -1.3 601,453 - -1.8 601,453 - +0.6 601,477 + +0.6 601,478 - +0.2 601,478 - +0.6 601,858 + AO353_02835 0.58 +1.1 601,858 + AO353_02835 0.58 -0.4 601,858 + AO353_02835 0.58 -0.5 601,858 + AO353_02835 0.58 -1.2 601,858 + AO353_02835 0.58 +0.7 601,858 + AO353_02835 0.58 -1.4 601,858 + AO353_02835 0.58 +0.2 601,859 - AO353_02835 0.58 +1.1 601,859 - AO353_02835 0.58 +0.1 601,859 - AO353_02835 0.58 +0.3 601,859 - AO353_02835 0.58 -0.9 601,859 - AO353_02835 0.58 +0.4 601,859 - AO353_02835 0.58 -0.2 601,859 - AO353_02835 0.58 -0.2 601,859 - AO353_02835 0.58 -0.5 601,859 - AO353_02835 0.58 -0.3 601,859 - AO353_02835 0.58 +0.6 601,939 + AO353_02835 0.69 +1.1 601,939 + AO353_02835 0.69 +0.3 601,940 - AO353_02835 0.69 +1.6 601,940 - AO353_02835 0.69 -0.0 602,027 + AO353_02835 0.81 +1.3 602,093 - -0.2 602,093 - -0.4 602,093 - -1.1 602,139 + +0.4 602,139 + -1.3 602,140 - +1.0 602,185 + -0.4 602,185 + -0.0 602,185 + +0.5 602,185 + +0.6 602,185 + -0.1 602,186 - +0.1 602,188 + +0.7 602,188 + -0.1 602,189 - -1.1 602,189 - -0.4 602,214 + +0.7 602,215 - +0.9 602,215 - +2.1 602,230 + -1.8 602,230 + +1.0 602,231 - -0.9 602,231 - +1.6 602,231 - -0.3 602,240 + -0.7 602,240 + +0.6 602,241 - -0.1 602,257 + -1.4 602,257 + -0.2 602,257 + -0.7 602,257 + +1.1 602,257 + +0.1 602,258 - -1.6 602,258 - +0.1 602,258 - -0.9 602,258 - -0.7 602,322 - +0.8 602,322 - -1.2 602,354 + +1.4 602,409 + +0.7 602,431 + +1.8 602,441 - +0.3 602,441 - -1.0 602,462 + -0.7 602,463 - -0.2 602,465 + -1.6 602,465 + -0.4 602,465 + -0.7 602,465 + -1.0 602,493 + -0.9 602,493 + +0.8 602,522 + -1.3 602,522 + +0.1 602,522 + -1.4 602,528 + +0.4 602,528 + -0.7 602,610 + -0.1 602,696 + -0.9 602,696 + +0.3 602,801 + -1.8 602,823 + -0.2 602,823 + -0.9
Or see this region's nucleotide sequence