Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02515 and AO353_02520 are separated by 145 nucleotides AO353_02520 and AO353_02525 are separated by 118 nucleotides AO353_02525 and AO353_02530 are separated by 91 nucleotides
AO353_02515: AO353_02515 - recombination-associated protein RdgC, at 535,589 to 536,509
_02515
AO353_02520: AO353_02520 - sodium transporter, at 536,655 to 537,620
_02520
AO353_02525: AO353_02525 - molecular chaperone, at 537,739 to 538,059
_02525
AO353_02530: AO353_02530 - glycerol acyltransferase, at 538,151 to 540,025
_02530
Position (kb) 536
537
538 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 535.712 kb on + strand, within AO353_02515 at 535.712 kb on + strand, within AO353_02515 at 535.712 kb on + strand, within AO353_02515 at 535.712 kb on + strand, within AO353_02515 at 535.712 kb on + strand, within AO353_02515 at 535.713 kb on - strand, within AO353_02515 at 535.713 kb on - strand, within AO353_02515 at 535.713 kb on - strand, within AO353_02515 at 535.758 kb on + strand, within AO353_02515 at 535.758 kb on + strand, within AO353_02515 at 535.758 kb on + strand, within AO353_02515 at 535.758 kb on + strand, within AO353_02515 at 535.758 kb on + strand, within AO353_02515 at 535.758 kb on + strand, within AO353_02515 at 535.759 kb on - strand, within AO353_02515 at 535.759 kb on - strand, within AO353_02515 at 535.759 kb on - strand, within AO353_02515 at 535.759 kb on - strand, within AO353_02515 at 535.759 kb on - strand, within AO353_02515 at 535.759 kb on - strand, within AO353_02515 at 535.759 kb on - strand, within AO353_02515 at 535.886 kb on + strand, within AO353_02515 at 535.886 kb on + strand, within AO353_02515 at 535.887 kb on - strand, within AO353_02515 at 535.887 kb on - strand, within AO353_02515 at 535.887 kb on - strand, within AO353_02515 at 535.887 kb on - strand, within AO353_02515 at 535.888 kb on + strand, within AO353_02515 at 535.888 kb on + strand, within AO353_02515 at 535.888 kb on + strand, within AO353_02515 at 535.949 kb on - strand, within AO353_02515 at 536.076 kb on + strand, within AO353_02515 at 536.077 kb on - strand, within AO353_02515 at 536.160 kb on + strand, within AO353_02515 at 536.161 kb on - strand, within AO353_02515 at 536.266 kb on + strand, within AO353_02515 at 536.266 kb on + strand, within AO353_02515 at 536.507 kb on + strand at 536.507 kb on + strand at 536.507 kb on + strand at 536.507 kb on + strand at 536.507 kb on + strand at 536.508 kb on - strand at 536.516 kb on + strand at 536.546 kb on - strand at 536.546 kb on - strand at 536.546 kb on - strand at 536.546 kb on - strand at 536.546 kb on - strand at 536.546 kb on - strand at 536.578 kb on + strand at 536.578 kb on + strand at 536.578 kb on + strand at 536.578 kb on + strand at 536.578 kb on + strand at 536.579 kb on - strand at 536.579 kb on - strand at 536.579 kb on - strand at 536.579 kb on - strand at 536.579 kb on - strand at 536.583 kb on + strand at 536.583 kb on + strand at 536.583 kb on + strand at 536.583 kb on + strand at 536.583 kb on + strand at 536.583 kb on + strand at 536.583 kb on + strand at 536.584 kb on - strand at 536.584 kb on - strand at 536.584 kb on - strand at 536.584 kb on - strand at 536.584 kb on - strand at 536.584 kb on - strand at 536.601 kb on - strand at 536.628 kb on + strand at 536.637 kb on + strand at 536.639 kb on + strand at 536.639 kb on + strand at 536.639 kb on + strand at 536.639 kb on + strand at 536.639 kb on + strand at 536.639 kb on + strand at 536.639 kb on + strand at 536.639 kb on + strand at 536.639 kb on + strand at 536.639 kb on + strand at 536.639 kb on + strand at 536.640 kb on - strand at 536.640 kb on - strand at 536.640 kb on - strand at 536.640 kb on - strand at 536.640 kb on - strand at 536.640 kb on - strand at 536.640 kb on - strand at 536.640 kb on - strand at 536.640 kb on - strand at 536.640 kb on - strand at 536.640 kb on - strand at 536.640 kb on - strand at 536.640 kb on - strand at 536.640 kb on - strand at 536.640 kb on - strand at 536.640 kb on - strand at 536.640 kb on - strand at 536.640 kb on - strand at 536.640 kb on - strand at 536.640 kb on - strand at 536.640 kb on - strand at 536.640 kb on - strand at 536.725 kb on + strand at 537.351 kb on - strand, within AO353_02520 at 537.351 kb on - strand, within AO353_02520 at 537.351 kb on - strand, within AO353_02520 at 537.375 kb on + strand, within AO353_02520 at 537.375 kb on + strand, within AO353_02520 at 537.558 kb on + strand at 537.558 kb on + strand at 537.558 kb on + strand at 537.559 kb on - strand at 537.559 kb on - strand at 537.559 kb on - strand at 537.559 kb on - strand at 537.559 kb on - strand at 537.559 kb on - strand at 537.559 kb on - strand at 537.626 kb on + strand at 537.646 kb on + strand at 537.647 kb on - strand at 537.656 kb on + strand at 537.656 kb on + strand at 537.656 kb on + strand at 537.656 kb on + strand at 537.658 kb on + strand at 537.658 kb on + strand at 537.658 kb on + strand at 537.659 kb on - strand at 537.659 kb on - strand at 537.659 kb on - strand at 537.659 kb on - strand at 537.698 kb on + strand at 537.698 kb on + strand at 537.698 kb on + strand at 537.699 kb on - strand at 537.699 kb on - strand at 537.701 kb on + strand at 537.701 kb on + strand at 537.701 kb on + strand at 537.701 kb on + strand at 537.701 kb on + strand at 537.701 kb on + strand at 537.702 kb on - strand at 537.702 kb on - strand at 537.702 kb on - strand at 537.702 kb on - strand at 537.702 kb on - strand at 537.702 kb on - strand at 537.802 kb on + strand, within AO353_02525 at 537.802 kb on + strand, within AO353_02525 at 537.803 kb on - strand, within AO353_02525 at 537.803 kb on - strand, within AO353_02525 at 537.803 kb on - strand, within AO353_02525 at 537.803 kb on - strand, within AO353_02525 at 537.803 kb on - strand, within AO353_02525 at 537.804 kb on + strand, within AO353_02525 at 537.804 kb on + strand, within AO353_02525 at 537.805 kb on - strand, within AO353_02525 at 537.805 kb on - strand, within AO353_02525 at 537.858 kb on - strand, within AO353_02525 at 537.858 kb on - strand, within AO353_02525 at 537.914 kb on - strand, within AO353_02525 at 537.914 kb on - strand, within AO353_02525 at 538.057 kb on + strand at 538.057 kb on + strand at 538.057 kb on + strand at 538.058 kb on - strand at 538.058 kb on - strand at 538.088 kb on - strand at 538.093 kb on + strand at 538.093 kb on + strand at 538.093 kb on + strand at 538.093 kb on + strand at 538.093 kb on + strand at 538.094 kb on - strand at 538.094 kb on - strand at 538.100 kb on + strand at 538.101 kb on - strand at 538.101 kb on - strand at 538.109 kb on - strand at 538.152 kb on + strand at 538.152 kb on + strand at 538.152 kb on + strand at 538.152 kb on + strand at 538.153 kb on - strand at 538.153 kb on - strand at 538.153 kb on - strand at 538.153 kb on - strand at 538.156 kb on + strand at 538.156 kb on + strand at 538.156 kb on + strand at 538.157 kb on - strand at 538.449 kb on + strand, within AO353_02530 at 538.449 kb on + strand, within AO353_02530 at 538.450 kb on - strand, within AO353_02530 at 538.558 kb on + strand, within AO353_02530 at 538.559 kb on - strand, within AO353_02530 at 538.559 kb on - strand at 538.559 kb on - strand, within AO353_02530 at 538.559 kb on - strand, within AO353_02530 at 538.559 kb on - strand, within AO353_02530 at 538.559 kb on - strand, within AO353_02530 at 538.559 kb on - strand, within AO353_02530 at 538.560 kb on + strand, within AO353_02530 at 538.560 kb on + strand, within AO353_02530 at 538.560 kb on + strand, within AO353_02530 at 538.560 kb on + strand, within AO353_02530 at 538.560 kb on + strand, within AO353_02530 at 538.560 kb on + strand, within AO353_02530 at 538.560 kb on + strand, within AO353_02530 at 538.560 kb on + strand, within AO353_02530 at 538.561 kb on - strand, within AO353_02530 at 538.561 kb on - strand, within AO353_02530 at 538.561 kb on - strand, within AO353_02530 at 538.561 kb on - strand, within AO353_02530 at 538.561 kb on - strand, within AO353_02530 at 538.561 kb on - strand, within AO353_02530 at 538.561 kb on - strand, within AO353_02530 at 538.561 kb on - strand, within AO353_02530 at 538.561 kb on - strand, within AO353_02530 at 538.561 kb on - strand, within AO353_02530 at 538.569 kb on + strand, within AO353_02530 at 538.569 kb on + strand, within AO353_02530 at 538.569 kb on + strand, within AO353_02530 at 538.569 kb on + strand, within AO353_02530 at 538.569 kb on + strand, within AO353_02530 at 538.569 kb on + strand, within AO353_02530 at 538.569 kb on + strand, within AO353_02530 at 538.569 kb on + strand, within AO353_02530 at 538.569 kb on + strand, within AO353_02530 at 538.569 kb on + strand, within AO353_02530 at 538.570 kb on - strand, within AO353_02530 at 538.570 kb on - strand, within AO353_02530 at 538.570 kb on - strand, within AO353_02530 at 538.570 kb on - strand, within AO353_02530 at 538.570 kb on - strand, within AO353_02530 at 538.572 kb on + strand, within AO353_02530 at 538.572 kb on + strand, within AO353_02530 at 538.572 kb on + strand, within AO353_02530 at 538.572 kb on + strand, within AO353_02530 at 538.572 kb on + strand, within AO353_02530 at 538.572 kb on + strand, within AO353_02530 at 538.572 kb on + strand, within AO353_02530 at 538.572 kb on + strand, within AO353_02530 at 538.572 kb on + strand, within AO353_02530 at 538.572 kb on + strand, within AO353_02530 at 538.573 kb on - strand, within AO353_02530 at 538.573 kb on - strand, within AO353_02530 at 538.573 kb on - strand, within AO353_02530
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 535,712 + AO353_02515 0.13 +0.1 535,712 + AO353_02515 0.13 +0.5 535,712 + AO353_02515 0.13 -0.5 535,712 + AO353_02515 0.13 +0.3 535,712 + AO353_02515 0.13 -0.9 535,713 - AO353_02515 0.13 -0.1 535,713 - AO353_02515 0.13 -0.5 535,713 - AO353_02515 0.13 -1.4 535,758 + AO353_02515 0.18 +0.5 535,758 + AO353_02515 0.18 -1.4 535,758 + AO353_02515 0.18 +0.8 535,758 + AO353_02515 0.18 +0.3 535,758 + AO353_02515 0.18 +1.0 535,758 + AO353_02515 0.18 -0.1 535,759 - AO353_02515 0.18 -0.7 535,759 - AO353_02515 0.18 +0.1 535,759 - AO353_02515 0.18 -2.4 535,759 - AO353_02515 0.18 +1.7 535,759 - AO353_02515 0.18 -0.5 535,759 - AO353_02515 0.18 +2.1 535,759 - AO353_02515 0.18 +0.5 535,886 + AO353_02515 0.32 -1.1 535,886 + AO353_02515 0.32 +0.7 535,887 - AO353_02515 0.32 -1.2 535,887 - AO353_02515 0.32 -1.8 535,887 - AO353_02515 0.32 +0.8 535,887 - AO353_02515 0.32 -0.2 535,888 + AO353_02515 0.32 -0.1 535,888 + AO353_02515 0.32 +1.4 535,888 + AO353_02515 0.32 -0.5 535,949 - AO353_02515 0.39 +0.1 536,076 + AO353_02515 0.53 -0.8 536,077 - AO353_02515 0.53 +0.5 536,160 + AO353_02515 0.62 +2.1 536,161 - AO353_02515 0.62 +1.1 536,266 + AO353_02515 0.74 +0.5 536,266 + AO353_02515 0.74 +0.1 536,507 + +0.7 536,507 + -0.1 536,507 + -1.4 536,507 + -0.1 536,507 + -0.7 536,508 - -0.7 536,516 + +0.9 536,546 - -0.1 536,546 - -1.8 536,546 - +0.7 536,546 - -1.1 536,546 - +0.1 536,546 - +1.6 536,578 + -0.5 536,578 + +0.8 536,578 + -1.2 536,578 + +0.5 536,578 + +0.8 536,579 - -0.5 536,579 - +0.7 536,579 - +0.1 536,579 - -0.9 536,579 - +0.8 536,583 + -0.9 536,583 + -0.7 536,583 + -1.0 536,583 + -1.1 536,583 + -1.8 536,583 + +0.5 536,583 + -0.2 536,584 - -0.7 536,584 - +0.9 536,584 - -0.5 536,584 - +0.8 536,584 - +1.5 536,584 - -2.1 536,601 - -1.7 536,628 + +0.7 536,637 + +0.2 536,639 + -1.1 536,639 + +0.8 536,639 + -0.6 536,639 + -0.1 536,639 + +0.5 536,639 + -1.1 536,639 + -2.3 536,639 + +0.7 536,639 + -1.0 536,639 + -0.2 536,639 + -0.7 536,640 - +0.5 536,640 - +1.1 536,640 - +0.5 536,640 - -0.3 536,640 - +0.1 536,640 - +0.7 536,640 - -0.5 536,640 - +0.1 536,640 - +0.7 536,640 - +0.9 536,640 - -0.2 536,640 - +0.8 536,640 - -0.3 536,640 - +0.7 536,640 - -1.2 536,640 - +0.7 536,640 - -1.1 536,640 - -0.7 536,640 - -1.2 536,640 - -1.9 536,640 - -0.7 536,640 - -0.2 536,725 + -0.3 537,351 - AO353_02520 0.72 -0.0 537,351 - AO353_02520 0.72 -0.2 537,351 - AO353_02520 0.72 -2.0 537,375 + AO353_02520 0.75 -1.3 537,375 + AO353_02520 0.75 -0.6 537,558 + +0.1 537,558 + +2.7 537,558 + -0.4 537,559 - +1.1 537,559 - +1.2 537,559 - -0.5 537,559 - -0.5 537,559 - +2.7 537,559 - +1.0 537,559 - +0.1 537,626 + +1.3 537,646 + -0.9 537,647 - +1.1 537,656 + -0.0 537,656 + -2.1 537,656 + -0.2 537,656 + +1.5 537,658 + -0.6 537,658 + +0.3 537,658 + -0.7 537,659 - -0.2 537,659 - -0.5 537,659 - +1.3 537,659 - -0.7 537,698 + +0.4 537,698 + -0.0 537,698 + +0.7 537,699 - -0.7 537,699 - -0.4 537,701 + -1.2 537,701 + -1.2 537,701 + +0.1 537,701 + +1.0 537,701 + -0.9 537,701 + -0.1 537,702 - +0.3 537,702 - -0.1 537,702 - -0.1 537,702 - -1.9 537,702 - +0.4 537,702 - +0.3 537,802 + AO353_02525 0.20 +0.1 537,802 + AO353_02525 0.20 +0.7 537,803 - AO353_02525 0.20 -0.5 537,803 - AO353_02525 0.20 +0.7 537,803 - AO353_02525 0.20 -0.7 537,803 - AO353_02525 0.20 +1.0 537,803 - AO353_02525 0.20 -0.5 537,804 + AO353_02525 0.20 -0.5 537,804 + AO353_02525 0.20 -0.8 537,805 - AO353_02525 0.21 -0.9 537,805 - AO353_02525 0.21 -0.7 537,858 - AO353_02525 0.37 -1.2 537,858 - AO353_02525 0.37 +2.5 537,914 - AO353_02525 0.55 +0.5 537,914 - AO353_02525 0.55 +0.4 538,057 + -0.2 538,057 + +0.7 538,057 + -0.5 538,058 - +1.1 538,058 - +0.5 538,088 - -0.5 538,093 + -2.1 538,093 + +0.7 538,093 + +0.7 538,093 + +0.1 538,093 + -2.3 538,094 - +1.9 538,094 - -0.3 538,100 + +0.4 538,101 - +0.8 538,101 - +1.0 538,109 - +0.3 538,152 + -0.0 538,152 + -0.2 538,152 + -0.8 538,152 + -0.4 538,153 - +0.7 538,153 - -1.3 538,153 - +0.5 538,153 - +1.0 538,156 + -0.7 538,156 + +0.9 538,156 + +0.3 538,157 - -1.3 538,449 + AO353_02530 0.16 +0.3 538,449 + AO353_02530 0.16 -2.8 538,450 - AO353_02530 0.16 -0.2 538,558 + AO353_02530 0.22 +1.1 538,559 - AO353_02530 0.22 -1.7 538,559 - -0.2 538,559 - AO353_02530 0.22 -0.9 538,559 - AO353_02530 0.22 -0.6 538,559 - AO353_02530 0.22 -0.4 538,559 - AO353_02530 0.22 -0.7 538,559 - AO353_02530 0.22 -1.3 538,560 + AO353_02530 0.22 -0.9 538,560 + AO353_02530 0.22 +0.9 538,560 + AO353_02530 0.22 -1.8 538,560 + AO353_02530 0.22 +0.5 538,560 + AO353_02530 0.22 -0.1 538,560 + AO353_02530 0.22 -0.1 538,560 + AO353_02530 0.22 +0.3 538,560 + AO353_02530 0.22 -0.6 538,561 - AO353_02530 0.22 +0.9 538,561 - AO353_02530 0.22 +0.9 538,561 - AO353_02530 0.22 +2.1 538,561 - AO353_02530 0.22 +1.4 538,561 - AO353_02530 0.22 -0.2 538,561 - AO353_02530 0.22 -0.3 538,561 - AO353_02530 0.22 -0.5 538,561 - AO353_02530 0.22 +0.3 538,561 - AO353_02530 0.22 -0.5 538,561 - AO353_02530 0.22 -0.1 538,569 + AO353_02530 0.22 +0.5 538,569 + AO353_02530 0.22 -0.1 538,569 + AO353_02530 0.22 -0.2 538,569 + AO353_02530 0.22 +0.2 538,569 + AO353_02530 0.22 +0.3 538,569 + AO353_02530 0.22 -1.1 538,569 + AO353_02530 0.22 -1.7 538,569 + AO353_02530 0.22 -2.6 538,569 + AO353_02530 0.22 -0.5 538,569 + AO353_02530 0.22 +0.8 538,570 - AO353_02530 0.22 -0.1 538,570 - AO353_02530 0.22 +0.8 538,570 - AO353_02530 0.22 -1.9 538,570 - AO353_02530 0.22 +0.1 538,570 - AO353_02530 0.22 -1.4 538,572 + AO353_02530 0.22 +0.9 538,572 + AO353_02530 0.22 -1.1 538,572 + AO353_02530 0.22 -1.7 538,572 + AO353_02530 0.22 +1.1 538,572 + AO353_02530 0.22 +0.2 538,572 + AO353_02530 0.22 -0.8 538,572 + AO353_02530 0.22 -0.4 538,572 + AO353_02530 0.22 -1.1 538,572 + AO353_02530 0.22 +0.5 538,572 + AO353_02530 0.22 +0.3 538,573 - AO353_02530 0.23 +0.2 538,573 - AO353_02530 0.23 +0.9 538,573 - AO353_02530 0.23 +0.4
Or see this region's nucleotide sequence