Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01450 and AO353_01455 overlap by 1 nucleotides AO353_01455 and AO353_01460 overlap by 4 nucleotides AO353_01460 and AO353_01465 are separated by 110 nucleotides
AO353_01450: AO353_01450 - tetraacyldisaccharide 4'-kinase, at 311,056 to 312,066
_01450
AO353_01455: AO353_01455 - biopolymer transporter ExbD, at 312,066 to 312,494
_01455
AO353_01460: AO353_01460 - biopolymer transporter ExbB, at 312,491 to 313,126
_01460
AO353_01465: AO353_01465 - competence protein ComEC, at 313,237 to 315,471
_01465
Position (kb) 312
313
314 Strain fitness (log2 ratio) -2
-1
0
1
2 at 312.480 kb on - strand at 313.164 kb on + strand at 313.164 kb on + strand at 313.164 kb on + strand at 313.164 kb on + strand at 313.164 kb on + strand at 313.165 kb on - strand at 313.165 kb on - strand at 313.239 kb on - strand at 313.349 kb on + strand at 313.349 kb on + strand at 313.349 kb on + strand at 313.349 kb on + strand at 313.350 kb on - strand at 313.350 kb on - strand at 313.350 kb on - strand at 313.360 kb on - strand at 313.360 kb on - strand at 313.507 kb on + strand, within AO353_01465 at 313.508 kb on - strand, within AO353_01465 at 313.508 kb on - strand, within AO353_01465 at 313.508 kb on - strand, within AO353_01465 at 313.508 kb on - strand, within AO353_01465 at 313.665 kb on + strand, within AO353_01465 at 313.665 kb on + strand, within AO353_01465 at 313.665 kb on + strand, within AO353_01465 at 313.718 kb on + strand, within AO353_01465 at 313.925 kb on + strand, within AO353_01465 at 313.926 kb on - strand, within AO353_01465 at 314.012 kb on - strand, within AO353_01465 at 314.033 kb on - strand, within AO353_01465 at 314.092 kb on + strand, within AO353_01465 at 314.092 kb on + strand, within AO353_01465 at 314.092 kb on + strand, within AO353_01465 at 314.092 kb on + strand, within AO353_01465 at 314.092 kb on + strand, within AO353_01465 at 314.092 kb on + strand, within AO353_01465 at 314.092 kb on + strand, within AO353_01465 at 314.092 kb on + strand, within AO353_01465 at 314.092 kb on + strand, within AO353_01465 at 314.093 kb on - strand, within AO353_01465 at 314.093 kb on - strand, within AO353_01465 at 314.093 kb on - strand, within AO353_01465 at 314.093 kb on - strand, within AO353_01465 at 314.093 kb on - strand, within AO353_01465 at 314.095 kb on + strand, within AO353_01465 at 314.095 kb on + strand, within AO353_01465 at 314.095 kb on + strand, within AO353_01465 at 314.095 kb on + strand, within AO353_01465 at 314.096 kb on - strand, within AO353_01465 at 314.116 kb on + strand, within AO353_01465 at 314.116 kb on + strand, within AO353_01465
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 312,480 - +2.1 313,164 + -0.9 313,164 + -0.1 313,164 + -0.4 313,164 + -0.8 313,164 + -1.9 313,165 - +1.2 313,165 - -1.3 313,239 - -0.3 313,349 + +0.9 313,349 + -1.6 313,349 + +0.7 313,349 + +1.4 313,350 - -0.1 313,350 - +0.1 313,350 - -0.8 313,360 - -0.3 313,360 - -1.1 313,507 + AO353_01465 0.12 -0.2 313,508 - AO353_01465 0.12 +1.1 313,508 - AO353_01465 0.12 +0.5 313,508 - AO353_01465 0.12 -0.3 313,508 - AO353_01465 0.12 -0.2 313,665 + AO353_01465 0.19 +0.5 313,665 + AO353_01465 0.19 -1.5 313,665 + AO353_01465 0.19 -0.0 313,718 + AO353_01465 0.22 -0.0 313,925 + AO353_01465 0.31 -1.0 313,926 - AO353_01465 0.31 -0.0 314,012 - AO353_01465 0.35 -1.1 314,033 - AO353_01465 0.36 +0.2 314,092 + AO353_01465 0.38 -1.4 314,092 + AO353_01465 0.38 +1.6 314,092 + AO353_01465 0.38 -1.6 314,092 + AO353_01465 0.38 -0.5 314,092 + AO353_01465 0.38 -0.1 314,092 + AO353_01465 0.38 -1.2 314,092 + AO353_01465 0.38 -0.3 314,092 + AO353_01465 0.38 +2.4 314,092 + AO353_01465 0.38 -1.1 314,093 - AO353_01465 0.38 +1.1 314,093 - AO353_01465 0.38 -0.6 314,093 - AO353_01465 0.38 +1.1 314,093 - AO353_01465 0.38 +2.1 314,093 - AO353_01465 0.38 +1.3 314,095 + AO353_01465 0.38 +1.1 314,095 + AO353_01465 0.38 +0.9 314,095 + AO353_01465 0.38 -1.5 314,095 + AO353_01465 0.38 +2.1 314,096 - AO353_01465 0.38 -0.1 314,116 + AO353_01465 0.39 +0.4 314,116 + AO353_01465 0.39 +0.2
Or see this region's nucleotide sequence