Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_01425

Experiment: L-Serine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_01420 and AO353_01425 overlap by 4 nucleotidesAO353_01425 and AO353_01430 are separated by 136 nucleotides AO353_01420: AO353_01420 - acylaldehyde oxidase, at 305,686 to 308,001 _01420 AO353_01425: AO353_01425 - (2Fe-2S)-binding protein, at 307,998 to 308,468 _01425 AO353_01430: AO353_01430 - UDP-N-acetylenolpyruvoylglucosamine reductase, at 308,605 to 309,624 _01430 Position (kb) 307 308 309Strain fitness (log2 ratio) -2 -1 0 1 2 3at 307.047 kb on - strand, within AO353_01420at 307.128 kb on + strand, within AO353_01420at 307.128 kb on + strand, within AO353_01420at 307.128 kb on + strand, within AO353_01420at 307.128 kb on + strand, within AO353_01420at 307.128 kb on + strand, within AO353_01420at 307.128 kb on + strand, within AO353_01420at 307.129 kb on - strand, within AO353_01420at 307.129 kb on - strand, within AO353_01420at 307.129 kb on - strand, within AO353_01420at 307.129 kb on - strand, within AO353_01420at 307.265 kb on + strand, within AO353_01420at 307.325 kb on + strand, within AO353_01420at 307.368 kb on + strand, within AO353_01420at 307.369 kb on - strand, within AO353_01420at 307.386 kb on + strand, within AO353_01420at 307.386 kb on + strand, within AO353_01420at 307.388 kb on + strand, within AO353_01420at 307.389 kb on - strand, within AO353_01420at 307.504 kb on - strand, within AO353_01420at 307.614 kb on - strand, within AO353_01420at 307.817 kb on + strandat 307.817 kb on + strandat 307.817 kb on + strandat 307.817 kb on + strandat 307.817 kb on + strandat 307.818 kb on - strandat 307.818 kb on - strandat 307.818 kb on - strandat 307.968 kb on + strandat 307.968 kb on + strandat 307.969 kb on - strandat 307.969 kb on - strandat 307.969 kb on - strandat 308.059 kb on + strand, within AO353_01425at 308.059 kb on + strand, within AO353_01425at 308.059 kb on + strand, within AO353_01425at 308.059 kb on + strand, within AO353_01425at 308.059 kb on + strand, within AO353_01425at 308.060 kb on - strand, within AO353_01425at 308.078 kb on + strand, within AO353_01425at 308.078 kb on + strand, within AO353_01425at 308.078 kb on + strand, within AO353_01425at 308.078 kb on + strand, within AO353_01425at 308.078 kb on + strand, within AO353_01425at 308.078 kb on + strand, within AO353_01425at 308.078 kb on + strand, within AO353_01425at 308.079 kb on - strand, within AO353_01425at 308.079 kb on - strand, within AO353_01425at 308.079 kb on - strand, within AO353_01425at 308.079 kb on - strand, within AO353_01425at 308.079 kb on - strand, within AO353_01425at 308.322 kb on - strand, within AO353_01425at 308.462 kb on + strandat 308.462 kb on + strandat 308.482 kb on + strandat 308.482 kb on + strandat 308.482 kb on + strandat 308.482 kb on + strandat 308.483 kb on - strandat 308.483 kb on - strandat 308.483 kb on - strandat 308.483 kb on - strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.484 kb on + strandat 308.485 kb on - strandat 308.485 kb on - strandat 308.485 kb on - strandat 308.485 kb on - strandat 308.485 kb on - strandat 308.485 kb on - strandat 308.485 kb on - strandat 308.485 kb on - strandat 308.485 kb on - strandat 308.485 kb on - strandat 308.485 kb on - strandat 308.485 kb on - strandat 308.485 kb on - strandat 308.485 kb on - strandat 308.488 kb on + strandat 308.488 kb on + strandat 308.488 kb on + strandat 308.488 kb on + strandat 308.488 kb on + strandat 308.488 kb on + strandat 308.488 kb on + strandat 308.489 kb on - strandat 308.489 kb on - strandat 308.489 kb on - strandat 308.489 kb on - strandat 308.489 kb on - strandat 308.489 kb on - strandat 308.489 kb on - strandat 308.489 kb on - strandat 308.489 kb on - strandat 308.494 kb on + strandat 308.494 kb on + strandat 308.494 kb on + strandat 308.526 kb on - strandat 308.526 kb on - strandat 308.526 kb on - strandat 308.530 kb on + strandat 308.530 kb on + strandat 308.530 kb on + strandat 308.601 kb on + strandat 308.602 kb on - strandat 308.602 kb on - strandat 308.610 kb on - strandat 308.610 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (C)
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307,047 - AO353_01420 0.59 +0.3
307,128 + AO353_01420 0.62 +0.8
307,128 + AO353_01420 0.62 -0.7
307,128 + AO353_01420 0.62 -0.1
307,128 + AO353_01420 0.62 +0.0
307,128 + AO353_01420 0.62 +1.2
307,128 + AO353_01420 0.62 +0.1
307,129 - AO353_01420 0.62 -1.5
307,129 - AO353_01420 0.62 -0.5
307,129 - AO353_01420 0.62 +1.2
307,129 - AO353_01420 0.62 -1.3
307,265 + AO353_01420 0.68 +1.0
307,325 + AO353_01420 0.71 +0.7
307,368 + AO353_01420 0.73 -1.1
307,369 - AO353_01420 0.73 -0.5
307,386 + AO353_01420 0.73 +0.3
307,386 + AO353_01420 0.73 +0.1
307,388 + AO353_01420 0.73 +1.0
307,389 - AO353_01420 0.74 -1.2
307,504 - AO353_01420 0.78 -0.2
307,614 - AO353_01420 0.83 -0.7
307,817 + +3.0
307,817 + +0.2
307,817 + -0.8
307,817 + +0.6
307,817 + +0.2
307,818 - -0.7
307,818 - -0.4
307,818 - +0.7
307,968 + -0.5
307,968 + +0.2
307,969 - -1.0
307,969 - +0.2
307,969 - +0.2
308,059 + AO353_01425 0.13 +1.0
308,059 + AO353_01425 0.13 -0.8
308,059 + AO353_01425 0.13 -0.5
308,059 + AO353_01425 0.13 +0.0
308,059 + AO353_01425 0.13 +0.5
308,060 - AO353_01425 0.13 -0.4
308,078 + AO353_01425 0.17 -0.8
308,078 + AO353_01425 0.17 -0.5
308,078 + AO353_01425 0.17 -0.2
308,078 + AO353_01425 0.17 -0.3
308,078 + AO353_01425 0.17 -1.3
308,078 + AO353_01425 0.17 -1.2
308,078 + AO353_01425 0.17 +0.4
308,079 - AO353_01425 0.17 -0.1
308,079 - AO353_01425 0.17 -1.8
308,079 - AO353_01425 0.17 -0.9
308,079 - AO353_01425 0.17 -0.9
308,079 - AO353_01425 0.17 -1.0
308,322 - AO353_01425 0.69 +0.5
308,462 + +2.4
308,462 + +0.1
308,482 + -0.5
308,482 + -0.3
308,482 + +1.0
308,482 + -1.1
308,483 - -1.6
308,483 - +0.6
308,483 - +0.5
308,483 - +0.9
308,484 + +0.2
308,484 + +0.5
308,484 + +0.8
308,484 + +0.6
308,484 + +0.5
308,484 + +0.2
308,484 + -0.5
308,484 + -1.0
308,484 + +1.6
308,484 + -0.1
308,484 + +0.2
308,484 + -0.2
308,484 + +0.2
308,484 + -0.5
308,484 + -2.0
308,484 + +0.5
308,484 + +0.2
308,484 + -0.5
308,484 + +1.5
308,484 + +1.0
308,484 + +0.2
308,484 + -1.8
308,484 + -0.4
308,484 + +0.5
308,484 + +0.7
308,485 - +0.2
308,485 - -0.3
308,485 - -0.8
308,485 - +1.3
308,485 - +0.2
308,485 - -1.0
308,485 - -0.0
308,485 - -1.3
308,485 - -0.4
308,485 - +1.0
308,485 - -0.3
308,485 - +0.7
308,485 - -0.2
308,485 - -1.4
308,488 + +1.3
308,488 + -0.3
308,488 + -0.3
308,488 + +1.0
308,488 + -0.2
308,488 + +0.5
308,488 + +0.6
308,489 - +0.0
308,489 - +0.2
308,489 - +0.9
308,489 - -0.4
308,489 - +0.1
308,489 - +1.6
308,489 - -0.7
308,489 - +1.5
308,489 - +2.0
308,494 + +0.6
308,494 + +0.7
308,494 + -0.5
308,526 - +0.0
308,526 - -0.3
308,526 - -0.3
308,530 + -0.3
308,530 + -0.4
308,530 + -1.7
308,601 + -0.6
308,602 - +0.7
308,602 - +1.5
308,610 - +0.7
308,610 - -0.5

Or see this region's nucleotide sequence