Strain Fitness in Shewanella loihica PV-4 around Shew_3620

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,316,979	+		Shew_3619	0.54	-0.0
4,317,146	-		Shew_3619	0.62	+0.6
4,317,370	-		Shew_3619	0.73	-1.2
4,317,382	-		Shew_3619	0.73	-0.2
4,317,462	+		Shew_3619	0.77	-0.0
4,317,470	-		Shew_3619	0.77	-2.9
4,317,539	+		Shew_3619	0.81	-1.0
4,317,539	+		Shew_3619	0.81	-0.9
4,317,539	+		Shew_3619	0.81	-0.4
4,317,547	-		Shew_3619	0.81	-2.0
4,317,590	-		Shew_3619	0.83	-0.0
4,317,728	+		Shew_3619	0.89	-1.6
4,317,771	+				-2.5
4,317,804	-				-1.0
4,317,962	+				-1.6
4,318,101	-		Shew_3620	0.14	-1.0
4,318,453	+		Shew_3620	0.52	-2.9
4,318,462	+		Shew_3620	0.53	-3.5
4,318,470	-		Shew_3620	0.54	-2.0
4,318,492	+		Shew_3620	0.56	-3.4
4,318,492	+		Shew_3620	0.56	-0.0
4,318,492	+		Shew_3620	0.56	-1.3
4,318,500	-		Shew_3620	0.57	-1.6
4,318,500	-		Shew_3620	0.57	+0.1
4,318,543	+		Shew_3620	0.62	-1.6
4,318,634	-		Shew_3620	0.72	-0.4
4,318,917	-				-0.1
4,318,924	-				-0.5
4,318,954	+				-0.0
4,318,983	+				+0.0
4,319,046	-				+0.3
4,319,047	+				+0.1
4,319,140	-				+0.2
4,319,218	-		Shew_3621	0.16	+0.6
4,319,305	-		Shew_3621	0.38	-0.0
4,319,661	+	hslO	Shew_3622	0.12	-0.3
4,319,661	+	hslO	Shew_3622	0.12	-0.1
4,319,669	-	hslO	Shew_3622	0.13	-0.4
4,319,669	-	hslO	Shew_3622	0.13	-0.0