Strain Fitness in Shewanella loihica PV-4 around Shew_3183

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,788,269	+		Shew_3181	0.88	+0.5
3,788,989	+				-0.2
3,788,997	+				+0.0
3,789,132	+				-0.6
3,789,200	-				+1.3
3,789,283	+				+0.5
3,789,329	-		Shew_3183	0.20	-1.0
3,789,384	+		Shew_3183	0.34	-1.0
3,789,432	+		Shew_3183	0.47	-0.4
3,789,636	+				+0.4
3,789,644	-				-1.9
3,789,646	+				-1.4
3,789,646	+				+0.2
3,789,646	+				+0.1
3,789,654	-				+1.9
3,789,654	-				+0.0
3,789,654	-				+0.1
3,789,754	+				+0.3
3,789,826	-				+0.6
3,789,842	-				+0.1
3,789,963	+				-0.2
3,790,022	+				-0.0
3,790,030	-				+0.5
3,790,079	+				-0.1
3,790,113	-				+0.6
3,790,238	-				+0.8
3,790,300	+				+0.4
3,790,300	+				+0.4
3,790,300	+				-0.5
3,790,300	+				+0.6
3,790,308	-				+1.2
3,790,354	-				-0.1
3,790,380	-				-0.1
3,790,422	-		Shew_3184	0.13	-0.2
3,790,437	-		Shew_3184	0.16	+0.3
3,790,490	-		Shew_3184	0.26	-0.0
3,790,533	-		Shew_3184	0.34	-0.1
3,790,586	-		Shew_3184	0.45	-0.0
3,790,603	+		Shew_3184	0.48	-0.6
3,790,621	-		Shew_3184	0.51	+1.2
3,790,621	-		Shew_3184	0.51	-1.4