Strain Fitness in Shewanella loihica PV-4 around Shew_3053

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,624,355	+		Shew_3052	0.15	-0.1
3,624,793	+		Shew_3052	0.64	+0.3
3,624,893	+		Shew_3052	0.75	+0.6
3,625,029	+				-0.2
3,625,306	+		Shew_3053	0.13	-0.0
3,625,384	-		Shew_3053	0.19	-0.7
3,625,384	-		Shew_3053	0.19	-0.3
3,625,843	-		Shew_3053	0.56	-0.1
3,625,897	+		Shew_3053	0.60	-0.2
3,626,128	-		Shew_3053	0.78	+0.2
3,626,353	+				+0.6
3,626,362	+				+0.4
3,626,370	-				+0.1
3,626,491	+				+0.1
3,626,627	-				-0.1
3,626,666	+				+0.8
3,626,789	+		Shew_3054	0.31	+2.6
3,627,006	-		Shew_3054	0.69	-0.0
3,627,300	-				+0.5
3,627,316	-				+0.0
3,627,342	+				+0.0