Strain Fitness in Shewanella loihica PV-4 around Shew_3022

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,587,820	-		Shew_3021	0.57	+0.6
3,587,958	+		Shew_3021	0.65	+0.4
3,587,983	-		Shew_3021	0.67	+0.1
3,588,317	+		Shew_3021	0.87	-2.0
3,588,582	+				+1.2
3,588,582	+				-0.7
3,588,590	-				+0.1
3,588,890	+		Shew_3022	0.14	-0.6
3,588,983	+		Shew_3022	0.28	-0.4
3,589,079	-		Shew_3022	0.42	-1.0
3,589,322	+		Shew_3022	0.78	+0.6
3,589,322	+		Shew_3022	0.78	-0.3
3,589,401	+		Shew_3022	0.89	-0.9
3,589,522	-				+0.5
3,589,522	-				-1.1
3,589,581	+				-0.1
3,589,794	+				-0.3
3,589,802	-				+0.0
3,589,893	+		Shew_3023	0.16	+0.8
3,590,259	+		Shew_3023	0.50	+1.4
3,590,267	-		Shew_3023	0.50	-0.2
3,590,402	-		Shew_3023	0.63	-0.3
3,590,402	-		Shew_3023	0.63	-0.3