Strain Fitness in Shewanella loihica PV-4 around Shew_2850

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,378,961	+		Shew_2849	0.56	-0.3
3,378,979	-		Shew_2849	0.57	-0.2
3,379,008	-		Shew_2849	0.59	+0.3
3,379,071	+		Shew_2849	0.64	+0.1
3,379,246	+		Shew_2849	0.78	+0.3
3,379,246	+		Shew_2849	0.78	-2.1
3,379,254	-		Shew_2849	0.78	+0.7
3,379,349	-		Shew_2849	0.86	+0.2
3,379,351	+		Shew_2849	0.86	+0.2
3,379,396	+		Shew_2849	0.89	+0.6
3,379,652	+				+1.0
3,379,784	-				+0.4
3,379,878	+				+0.4
3,379,967	+		Shew_2850	0.20	-0.8
3,379,975	-		Shew_2850	0.28	-0.5
3,380,042	-				+0.2
3,380,179	-				+0.1
3,380,191	-				-0.3
3,380,720	+		Shew_2851	0.20	+0.2
3,380,723	-		Shew_2851	0.20	+0.1
3,380,723	-		Shew_2851	0.20	+0.7
3,380,825	-		Shew_2851	0.26	+0.4