Strain Fitness in Shewanella loihica PV-4 around Shew_2419

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,838,468	+		Shew_2417	0.84	+0.2
2,838,476	-		Shew_2417	0.85	+0.2
2,838,839	-		Shew_2418	0.27	+0.5
2,839,042	-		Shew_2418	0.65	+0.2
2,839,042	-		Shew_2418	0.65	+0.0
2,839,131	+		Shew_2418	0.82	+0.8
2,839,258	+				+1.6
2,839,528	-		Shew_2419	0.28	-1.4
2,839,567	+		Shew_2419	0.36	-1.3
2,839,717	-		Shew_2419	0.68	-1.0
2,839,717	-		Shew_2419	0.68	-0.7
2,839,717	-		Shew_2419	0.68	-2.2
2,839,717	-		Shew_2419	0.68	-1.4
2,839,753	-		Shew_2419	0.75	-1.4
2,839,863	-				-1.0
2,839,935	-				-0.1
2,840,087	+				+0.7
2,840,087	+				-0.1
2,840,095	-				+0.2
2,840,095	-				+0.3
2,840,095	-				-0.3
2,840,562	+		Shew_2420	0.17	+0.0
2,840,619	-		Shew_2420	0.19	-0.2
2,840,698	-		Shew_2420	0.22	-0.0