Strain Fitness in Shewanella loihica PV-4 around Shew_1438
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,652,700 | + | Shew_1437 | 0.83 | +0.3 | |
1,652,708 | + | Shew_1437 | 0.83 | +0.8 | |
1,652,853 | - | +1.5 | |||
1,653,127 | + | -0.9 | |||
1,653,182 | - | +0.6 | |||
1,653,182 | - | +0.5 | |||
1,653,280 | + | -2.0 | |||
1,653,736 | + | Shew_1438 | 0.53 | -2.4 | |
1,654,177 | + | -0.0 | |||
1,654,629 | + | Shew_1439 | 0.52 | +0.6 | |
1,654,659 | + | Shew_1439 | 0.56 | +0.0 | |
1,654,667 | - | Shew_1439 | 0.58 | +0.4 | |
1,654,784 | - | Shew_1439 | 0.76 | +0.7 | |
1,655,074 | - | Shew_1440 | 0.12 | +0.5 |
Or see this region's nucleotide sequence