Strain Fitness in Shewanella loihica PV-4 around Shew_1403

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,614,787	-				-0.7
1,614,787	+				+0.7
1,614,787	+				-0.4
1,614,795	-				+1.7
1,614,811	+				+0.3
1,614,848	+				-0.4
1,614,933	-				-1.7
1,615,134	+		Shew_1402	0.28	-1.7
1,615,142	+		Shew_1402	0.29	-1.1
1,615,147	+		Shew_1402	0.29	-3.5
1,615,147	+		Shew_1402	0.29	-0.7
1,615,153	+		Shew_1402	0.30	-3.2
1,615,296	+		Shew_1402	0.46	-0.7
1,615,327	-		Shew_1402	0.50	-0.7
1,615,500	+		Shew_1402	0.70	-1.3
1,615,557	+		Shew_1402	0.76	-0.8
1,615,559	+		Shew_1402	0.76	-1.1
1,615,604	+		Shew_1402	0.82	-1.0
1,615,604	+		Shew_1402	0.82	-0.1
1,615,622	+		Shew_1402	0.84	-0.9
1,615,723	+				-1.4
1,615,780	+				-1.2
1,615,800	-				-1.7
1,615,853	+				-1.1
1,615,862	+		Shew_1403	0.10	-2.0
1,616,035	+		Shew_1403	0.30	-2.2
1,616,130	+		Shew_1403	0.41	-0.1
1,616,137	+		Shew_1403	0.42	-0.7
1,616,137	+		Shew_1403	0.42	-1.2
1,616,137	+		Shew_1403	0.42	-2.0
1,616,167	+		Shew_1403	0.45	-2.1
1,616,314	+		Shew_1403	0.62	-1.5
1,616,344	+		Shew_1403	0.66	-2.2
1,616,410	+		Shew_1403	0.73	-0.3
1,616,410	+		Shew_1403	0.73	-2.2
1,616,410	+		Shew_1403	0.73	-2.5
1,616,410	+		Shew_1403	0.73	-3.0
1,616,418	-		Shew_1403	0.74	-0.7
1,616,488	+		Shew_1403	0.82	-0.7
1,616,606	+				-0.1
1,616,614	-				-2.2
1,616,753	+		Shew_1404	0.20	-0.8
1,616,753	+		Shew_1404	0.20	+0.3
1,616,753	+		Shew_1404	0.20	-1.8
1,616,753	+		Shew_1404	0.20	-1.1
1,616,753	+		Shew_1404	0.20	-1.1
1,616,781	+		Shew_1404	0.25	-4.0
1,616,781	+		Shew_1404	0.25	-1.6
1,616,861	+		Shew_1404	0.40	-1.3
1,616,940	+		Shew_1404	0.54	-1.4
1,616,940	+		Shew_1404	0.54	-0.7
1,616,940	+		Shew_1404	0.54	-0.4
1,616,940	+		Shew_1404	0.54	-0.4
1,616,940	+		Shew_1404	0.54	-1.4
1,616,940	+		Shew_1404	0.54	-0.8
1,616,941	+		Shew_1404	0.55	-0.4
1,616,945	+		Shew_1404	0.55	-1.4
1,616,948	-		Shew_1404	0.56	-0.7
1,616,972	+		Shew_1404	0.60	-1.0
1,616,972	+		Shew_1404	0.60	-1.1
1,616,972	+		Shew_1404	0.60	-0.9
1,616,977	+		Shew_1404	0.61	-0.8
1,616,989	+		Shew_1404	0.63	-0.1
1,617,013	+		Shew_1404	0.68	-1.0
1,617,063	+		Shew_1404	0.77	-0.7
1,617,063	+		Shew_1404	0.77	-1.6
1,617,063	+		Shew_1404	0.77	-1.5
1,617,063	+		Shew_1404	0.77	-1.7
1,617,063	+		Shew_1404	0.77	-1.5
1,617,063	+		Shew_1404	0.77	-0.5
1,617,071	+		Shew_1404	0.78	-2.5
1,617,078	+		Shew_1404	0.80	-0.1
1,617,157	+				-0.8
1,617,163	-				-0.7
1,617,165	-				-0.7
1,617,211	+				-0.2
1,617,217	+				-1.0
1,617,217	+				-0.8
1,617,217	+				-1.0
1,617,217	+				+0.1
1,617,217	+				+0.2
1,617,223	+				+0.8
1,617,225	-				-0.7
1,617,376	+		Shew_1405	0.18	-0.1
1,617,455	+		Shew_1405	0.25	-0.4
1,617,455	+		Shew_1405	0.25	+0.2
1,617,556	+		Shew_1405	0.35	-0.4
1,617,559	+		Shew_1405	0.35	-1.1
1,617,634	+		Shew_1405	0.42	-1.0
1,617,634	+		Shew_1405	0.42	-0.4
1,617,634	+		Shew_1405	0.42	-0.8
1,617,634	+		Shew_1405	0.42	-1.5
1,617,634	+		Shew_1405	0.42	-0.2
1,617,634	+		Shew_1405	0.42	-0.4
1,617,634	+		Shew_1405	0.42	-0.3