Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_1143 and Shew_1144 are separated by 21 nucleotides Shew_1144 and Shew_1145 are separated by 16 nucleotides Shew_1145 and Shew_1146 are separated by 216 nucleotides Shew_1146 and Shew_1147 are separated by 173 nucleotides
Shew_1143: Shew_1143 - Holliday junction resolvase-like protein (RefSeq), at 1,320,077 to 1,320,496
_1143
Shew_1144: Shew_1144 - hypothetical protein (RefSeq), at 1,320,518 to 1,321,075
_1144
Shew_1145: Shew_1145 - translation initiation factor Sui1 (RefSeq), at 1,321,092 to 1,321,421
_1145
Shew_1146: Shew_1146 - hypothetical protein (RefSeq), at 1,321,638 to 1,321,952
_1146
Shew_1147: Shew_1147 - hypothetical protein (RefSeq), at 1,322,126 to 1,322,689
_1147
Position (kb) 1321
1322 Strain fitness (log2 ratio) -1
0
1 at 1320.688 kb on - strand, within Shew_1144 at 1320.923 kb on - strand, within Shew_1144 at 1321.138 kb on + strand, within Shew_1145 at 1321.146 kb on - strand, within Shew_1145 at 1321.146 kb on - strand, within Shew_1145 at 1321.184 kb on + strand, within Shew_1145 at 1321.345 kb on + strand, within Shew_1145 at 1321.695 kb on - strand, within Shew_1146 at 1321.874 kb on - strand, within Shew_1146 at 1322.060 kb on + strand at 1322.324 kb on + strand, within Shew_1147
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,320,688 - Shew_1144 0.30 +0.3 1,320,923 - Shew_1144 0.73 +0.7 1,321,138 + Shew_1145 0.14 -0.9 1,321,146 - Shew_1145 0.16 -0.3 1,321,146 - Shew_1145 0.16 -0.5 1,321,184 + Shew_1145 0.28 -0.0 1,321,345 + Shew_1145 0.77 -0.8 1,321,695 - Shew_1146 0.18 +0.3 1,321,874 - Shew_1146 0.75 +0.3 1,322,060 + +0.3 1,322,324 + Shew_1147 0.35 +0.8
Or see this region's nucleotide sequence