Strain Fitness in Shewanella loihica PV-4 around Shew_0995
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,151,010 | + | Shew_0994 | 0.23 | +0.1 | |
1,151,134 | + | Shew_0994 | 0.44 | +0.4 | |
1,151,134 | + | Shew_0994 | 0.44 | +0.4 | |
1,151,386 | + | Shew_0994 | 0.84 | +0.3 | |
1,151,630 | - | -0.3 | |||
1,152,439 | - | Shew_0995 | 0.46 | -0.8 | |
1,152,440 | + | Shew_0995 | 0.46 | -0.4 | |
1,152,462 | - | Shew_0995 | 0.48 | -0.5 | |
1,152,518 | - | Shew_0995 | 0.54 | -2.1 | |
1,153,071 | - | -0.5 | |||
1,153,081 | - | +0.0 |
Or see this region's nucleotide sequence