Strain Fitness in Shewanella loihica PV-4 around Shew_0902
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB |
|---|---|---|---|---|---|
| remove | |||||
| 1,023,197 | - | Shew_0901 | 0.79 | -1.5 | |
| 1,023,580 | + | +0.2 | |||
| 1,023,673 | + | -0.5 | |||
| 1,023,944 | + | Shew_0902 | 0.24 | +0.1 | |
| 1,024,177 | - | Shew_0902 | 0.46 | -0.2 | |
| 1,024,251 | - | Shew_0902 | 0.52 | -1.0 | |
| 1,024,524 | - | Shew_0902 | 0.77 | -1.1 | |
| 1,024,685 | + | +0.2 | |||
| 1,024,774 | - | -0.1 | |||
| 1,024,811 | + | +0.1 | |||
| 1,024,844 | + | +0.1 | |||
| 1,025,005 | + | +0.0 | |||
| 1,025,051 | - | Shew_0903 | 0.18 | -0.1 | |
| 1,025,146 | + | Shew_0903 | 0.37 | +0.7 | |
| 1,025,202 | - | Shew_0903 | 0.47 | -0.0 | |
| 1,025,287 | - | Shew_0903 | 0.64 | -1.5 | |
| 1,025,652 | - | +0.1 |
Or see this region's nucleotide sequence