Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_610 and Pf1N1B4_611 are separated by 147 nucleotides Pf1N1B4_611 and Pf1N1B4_612 are separated by 133 nucleotides Pf1N1B4_612 and Pf1N1B4_613 overlap by 4 nucleotides
Pf1N1B4_610 - Methyl-accepting chemotaxis transducer, at 703,268 to 705,406
_610
Pf1N1B4_611 - CoA transferase, CAIB/BAIF family, at 705,554 to 706,885
_611
Pf1N1B4_612 - DNA-3-methyladenine glycosylase II (EC 3.2.2.21), at 707,019 to 707,882
_612
Pf1N1B4_613 - Arginine/ornithine antiporter ArcD, at 707,879 to 709,306
_613
Position (kb) 705
706
707 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 705.404 kb on + strand at 705.404 kb on + strand at 705.404 kb on + strand at 705.405 kb on - strand at 705.405 kb on - strand at 705.405 kb on - strand at 705.405 kb on - strand at 705.405 kb on - strand at 705.405 kb on - strand at 705.405 kb on - strand at 705.419 kb on + strand at 705.419 kb on + strand at 705.522 kb on + strand at 705.522 kb on + strand at 705.522 kb on + strand at 705.523 kb on - strand at 705.523 kb on - strand at 705.523 kb on - strand at 705.551 kb on + strand at 705.551 kb on + strand at 705.551 kb on + strand at 705.552 kb on - strand at 705.552 kb on - strand at 705.552 kb on - strand at 705.552 kb on - strand at 705.552 kb on - strand at 705.552 kb on - strand at 705.552 kb on - strand at 705.552 kb on - strand at 705.565 kb on - strand at 705.565 kb on - strand at 705.836 kb on + strand, within Pf1N1B4_611 at 705.837 kb on - strand, within Pf1N1B4_611 at 705.868 kb on + strand, within Pf1N1B4_611 at 705.869 kb on - strand, within Pf1N1B4_611 at 706.516 kb on - strand, within Pf1N1B4_611 at 706.613 kb on + strand, within Pf1N1B4_611 at 706.997 kb on - strand at 707.063 kb on - strand at 707.209 kb on + strand, within Pf1N1B4_612 at 707.210 kb on - strand, within Pf1N1B4_612 at 707.210 kb on - strand, within Pf1N1B4_612 at 707.210 kb on - strand, within Pf1N1B4_612 at 707.210 kb on - strand, within Pf1N1B4_612 at 707.210 kb on - strand, within Pf1N1B4_612 at 707.397 kb on + strand, within Pf1N1B4_612 at 707.397 kb on + strand, within Pf1N1B4_612 at 707.398 kb on - strand at 707.398 kb on - strand, within Pf1N1B4_612 at 707.398 kb on - strand, within Pf1N1B4_612 at 707.398 kb on - strand, within Pf1N1B4_612 at 707.398 kb on - strand, within Pf1N1B4_612 at 707.398 kb on - strand, within Pf1N1B4_612 at 707.777 kb on - strand, within Pf1N1B4_612 at 707.851 kb on + strand at 707.852 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 705,404 + -0.0 705,404 + -1.3 705,404 + -1.0 705,405 - -0.0 705,405 - +1.4 705,405 - -0.4 705,405 - -1.4 705,405 - +2.3 705,405 - -1.4 705,405 - -0.4 705,419 + -0.6 705,419 + -0.0 705,522 + +0.3 705,522 + +2.3 705,522 + -0.4 705,523 - +0.6 705,523 - -1.6 705,523 - -1.6 705,551 + -1.0 705,551 + -1.0 705,551 + +0.8 705,552 - +1.0 705,552 - +0.6 705,552 - -0.4 705,552 - +0.8 705,552 - -0.0 705,552 - -0.8 705,552 - -1.0 705,552 - -2.4 705,565 - -2.4 705,565 - +0.5 705,836 + Pf1N1B4_611 0.21 +1.0 705,837 - Pf1N1B4_611 0.21 +1.6 705,868 + Pf1N1B4_611 0.24 -0.0 705,869 - Pf1N1B4_611 0.24 -0.6 706,516 - Pf1N1B4_611 0.72 +1.6 706,613 + Pf1N1B4_611 0.80 -1.6 706,997 - -1.0 707,063 - -0.0 707,209 + Pf1N1B4_612 0.22 +0.9 707,210 - Pf1N1B4_612 0.22 -0.0 707,210 - Pf1N1B4_612 0.22 -2.0 707,210 - Pf1N1B4_612 0.22 -1.6 707,210 - Pf1N1B4_612 0.22 -2.8 707,210 - Pf1N1B4_612 0.22 +0.7 707,397 + Pf1N1B4_612 0.44 +1.3 707,397 + Pf1N1B4_612 0.44 -0.0 707,398 - -0.0 707,398 - Pf1N1B4_612 0.44 +3.0 707,398 - Pf1N1B4_612 0.44 -0.4 707,398 - Pf1N1B4_612 0.44 +2.3 707,398 - Pf1N1B4_612 0.44 -0.0 707,398 - Pf1N1B4_612 0.44 +0.4 707,777 - Pf1N1B4_612 0.88 +0.8 707,851 + +2.1 707,852 - -2.0
Or see this region's nucleotide sequence