Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5976
Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.006 mg/ml |
---|---|---|---|---|---|
remove | |||||
423,335 | + | -1.0 | |||
423,335 | + | Pf1N1B4_5975 | 0.64 | +0.5 | |
423,336 | - | Pf1N1B4_5975 | 0.64 | -2.3 | |
423,373 | + | Pf1N1B4_5975 | 0.68 | +0.5 | |
423,374 | - | Pf1N1B4_5975 | 0.68 | -0.7 | |
423,589 | - | Pf1N1B4_5975 | 0.89 | -0.4 | |
423,589 | - | Pf1N1B4_5975 | 0.89 | -1.4 | |
423,739 | - | -1.4 | |||
423,739 | - | +0.2 | |||
423,831 | + | +0.1 | |||
423,832 | - | -0.1 | |||
424,192 | + | Pf1N1B4_5976 | 0.41 | -1.0 | |
424,228 | + | -1.4 | |||
424,228 | + | Pf1N1B4_5976 | 0.45 | -0.0 | |
424,246 | + | Pf1N1B4_5976 | 0.47 | +0.3 | |
424,528 | + | Pf1N1B4_5976 | 0.77 | -2.0 | |
424,529 | - | Pf1N1B4_5976 | 0.78 | -1.4 | |
424,820 | - | -2.0 | |||
424,862 | - | -1.6 | |||
425,598 | + | Pf1N1B4_5977 | 0.57 | +1.6 | |
425,599 | - | -0.4 | |||
425,599 | - | Pf1N1B4_5977 | 0.57 | -0.4 | |
425,625 | + | Pf1N1B4_5977 | 0.59 | -0.4 | |
425,721 | + | Pf1N1B4_5977 | 0.65 | +0.0 |
Or see this region's nucleotide sequence