Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_5746 and Pf1N1B4_5747 are separated by 132 nucleotides Pf1N1B4_5747 and Pf1N1B4_5748 are separated by 30 nucleotides Pf1N1B4_5748 and Pf1N1B4_5749 are separated by 262 nucleotides
Pf1N1B4_5746 - FIG139552: Putative protease, at 187,631 to 188,626
_5746
Pf1N1B4_5747 - Molybdopterin biosynthesis protein MoeA, at 188,759 to 189,538
_5747
Pf1N1B4_5748 - hypothetical protein, at 189,569 to 189,727
_5748
Pf1N1B4_5749 - Molybdenum cofactor biosynthesis protein MoaB, at 189,990 to 190,544
_5749
Position (kb) 188
189
190 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 187.788 kb on + strand, within Pf1N1B4_5746 at 187.788 kb on + strand at 188.085 kb on + strand, within Pf1N1B4_5746 at 188.086 kb on - strand at 188.123 kb on + strand, within Pf1N1B4_5746 at 188.123 kb on + strand, within Pf1N1B4_5746 at 188.124 kb on - strand, within Pf1N1B4_5746 at 188.124 kb on - strand at 188.180 kb on + strand, within Pf1N1B4_5746 at 188.181 kb on - strand, within Pf1N1B4_5746 at 188.241 kb on + strand, within Pf1N1B4_5746 at 188.242 kb on - strand, within Pf1N1B4_5746 at 188.322 kb on + strand, within Pf1N1B4_5746 at 188.322 kb on + strand, within Pf1N1B4_5746 at 188.322 kb on + strand, within Pf1N1B4_5746 at 188.553 kb on + strand at 188.554 kb on - strand at 188.944 kb on - strand, within Pf1N1B4_5747 at 189.009 kb on - strand, within Pf1N1B4_5747 at 189.316 kb on - strand, within Pf1N1B4_5747 at 189.378 kb on + strand at 189.378 kb on + strand, within Pf1N1B4_5747 at 189.378 kb on + strand, within Pf1N1B4_5747 at 189.379 kb on - strand, within Pf1N1B4_5747 at 189.593 kb on - strand, within Pf1N1B4_5748 at 190.158 kb on - strand, within Pf1N1B4_5749 at 190.379 kb on - strand, within Pf1N1B4_5749 at 190.415 kb on + strand, within Pf1N1B4_5749 at 190.415 kb on + strand, within Pf1N1B4_5749 at 190.415 kb on + strand, within Pf1N1B4_5749 at 190.416 kb on - strand, within Pf1N1B4_5749 at 190.416 kb on - strand, within Pf1N1B4_5749 at 190.416 kb on - strand, within Pf1N1B4_5749
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 187,788 + Pf1N1B4_5746 0.16 +2.0 187,788 + -0.5 188,085 + Pf1N1B4_5746 0.46 -1.0 188,086 - -2.0 188,123 + Pf1N1B4_5746 0.49 -0.5 188,123 + Pf1N1B4_5746 0.49 -1.5 188,124 - Pf1N1B4_5746 0.49 +1.9 188,124 - -2.3 188,180 + Pf1N1B4_5746 0.55 -1.1 188,181 - Pf1N1B4_5746 0.55 -2.5 188,241 + Pf1N1B4_5746 0.61 +0.5 188,242 - Pf1N1B4_5746 0.61 -1.0 188,322 + Pf1N1B4_5746 0.69 -1.0 188,322 + Pf1N1B4_5746 0.69 +1.1 188,322 + Pf1N1B4_5746 0.69 +0.2 188,553 + -0.5 188,554 - -0.5 188,944 - Pf1N1B4_5747 0.24 -1.7 189,009 - Pf1N1B4_5747 0.32 +1.4 189,316 - Pf1N1B4_5747 0.71 -0.6 189,378 + +1.5 189,378 + Pf1N1B4_5747 0.79 -0.5 189,378 + Pf1N1B4_5747 0.79 -1.5 189,379 - Pf1N1B4_5747 0.79 -1.8 189,593 - Pf1N1B4_5748 0.15 +0.1 190,158 - Pf1N1B4_5749 0.30 +0.4 190,379 - Pf1N1B4_5749 0.70 -1.7 190,415 + Pf1N1B4_5749 0.77 -3.5 190,415 + Pf1N1B4_5749 0.77 -1.6 190,415 + Pf1N1B4_5749 0.77 -2.3 190,416 - Pf1N1B4_5749 0.77 -0.0 190,416 - Pf1N1B4_5749 0.77 +0.1 190,416 - Pf1N1B4_5749 0.77 +0.4
Or see this region's nucleotide sequence