Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_4658 and Pf1N1B4_4659 are separated by 265 nucleotides Pf1N1B4_4659 and Pf1N1B4_4660 are separated by 230 nucleotides Pf1N1B4_4660 and Pf1N1B4_4661 are separated by 185 nucleotides
Pf1N1B4_4658 - hypothetical protein, at 5,136,242 to 5,137,210
_4658
Pf1N1B4_4659 - Putative outer membrane lipoprotein, at 5,137,476 to 5,138,147
_4659
Pf1N1B4_4660 - PhnB protein, at 5,138,378 to 5,138,803
_4660
Pf1N1B4_4661 - Cell division inhibitor SULA, at 5,138,989 to 5,139,432
_4661
Position (kb) 5137
5138
5139 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5136.631 kb on + strand, within Pf1N1B4_4658 at 5136.707 kb on + strand, within Pf1N1B4_4658 at 5136.734 kb on + strand, within Pf1N1B4_4658 at 5136.734 kb on + strand, within Pf1N1B4_4658 at 5136.735 kb on - strand, within Pf1N1B4_4658 at 5136.737 kb on + strand, within Pf1N1B4_4658 at 5136.737 kb on + strand, within Pf1N1B4_4658 at 5136.737 kb on + strand, within Pf1N1B4_4658 at 5136.759 kb on + strand, within Pf1N1B4_4658 at 5136.827 kb on + strand, within Pf1N1B4_4658 at 5136.842 kb on + strand, within Pf1N1B4_4658 at 5136.843 kb on - strand at 5136.881 kb on + strand, within Pf1N1B4_4658 at 5136.882 kb on - strand, within Pf1N1B4_4658 at 5137.032 kb on + strand, within Pf1N1B4_4658 at 5137.092 kb on - strand at 5137.299 kb on + strand at 5137.299 kb on + strand at 5137.314 kb on + strand at 5137.349 kb on + strand at 5137.372 kb on + strand at 5137.373 kb on - strand at 5137.373 kb on - strand at 5137.381 kb on - strand at 5137.381 kb on - strand at 5137.420 kb on + strand at 5137.421 kb on - strand at 5137.421 kb on - strand at 5137.469 kb on + strand at 5137.470 kb on - strand at 5137.470 kb on - strand at 5137.678 kb on - strand, within Pf1N1B4_4659 at 5137.759 kb on - strand, within Pf1N1B4_4659 at 5137.759 kb on - strand, within Pf1N1B4_4659 at 5137.762 kb on - strand, within Pf1N1B4_4659 at 5137.928 kb on + strand at 5138.146 kb on - strand at 5138.281 kb on + strand at 5138.281 kb on + strand at 5138.355 kb on - strand at 5138.355 kb on - strand at 5138.355 kb on - strand at 5138.464 kb on - strand, within Pf1N1B4_4660 at 5138.928 kb on - strand at 5138.928 kb on - strand at 5138.928 kb on - strand at 5138.950 kb on + strand at 5139.041 kb on + strand, within Pf1N1B4_4661
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 5,136,631 + Pf1N1B4_4658 0.40 +1.6 5,136,707 + Pf1N1B4_4658 0.48 +0.8 5,136,734 + Pf1N1B4_4658 0.51 +0.3 5,136,734 + Pf1N1B4_4658 0.51 +0.6 5,136,735 - Pf1N1B4_4658 0.51 -0.4 5,136,737 + Pf1N1B4_4658 0.51 +0.2 5,136,737 + Pf1N1B4_4658 0.51 +1.2 5,136,737 + Pf1N1B4_4658 0.51 -2.8 5,136,759 + Pf1N1B4_4658 0.53 +0.1 5,136,827 + Pf1N1B4_4658 0.60 -2.0 5,136,842 + Pf1N1B4_4658 0.62 -0.0 5,136,843 - +0.9 5,136,881 + Pf1N1B4_4658 0.66 -1.8 5,136,882 - Pf1N1B4_4658 0.66 -2.4 5,137,032 + Pf1N1B4_4658 0.82 -0.4 5,137,092 - +0.6 5,137,299 + -1.4 5,137,299 + -0.4 5,137,314 + -1.4 5,137,349 + +0.6 5,137,372 + +0.9 5,137,373 - -1.4 5,137,373 - +0.2 5,137,381 - -0.1 5,137,381 - -2.0 5,137,420 + -1.4 5,137,421 - -0.4 5,137,421 - -1.4 5,137,469 + +0.3 5,137,470 - +0.2 5,137,470 - -0.9 5,137,678 - Pf1N1B4_4659 0.30 -2.2 5,137,759 - Pf1N1B4_4659 0.42 -0.4 5,137,759 - Pf1N1B4_4659 0.42 +2.2 5,137,762 - Pf1N1B4_4659 0.43 -1.4 5,137,928 + -0.4 5,138,146 - -0.4 5,138,281 + +1.6 5,138,281 + -1.4 5,138,355 - -0.7 5,138,355 - -0.6 5,138,355 - +1.0 5,138,464 - Pf1N1B4_4660 0.20 -0.0 5,138,928 - -2.2 5,138,928 - -2.0 5,138,928 - -0.0 5,138,950 + -0.4 5,139,041 + Pf1N1B4_4661 0.12 +0.3
Or see this region's nucleotide sequence