Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4425
Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.006 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,885,471 | + | Pf1N1B4_4424 | 0.79 | +0.4 | |
4,885,472 | - | Pf1N1B4_4424 | 0.79 | -0.4 | |
4,885,507 | + | Pf1N1B4_4424 | 0.82 | -1.0 | |
4,885,507 | + | +0.6 | |||
4,885,508 | - | Pf1N1B4_4424 | 0.82 | -1.1 | |
4,885,665 | + | +2.2 | |||
4,885,666 | - | -0.4 | |||
4,885,666 | - | -0.4 | |||
4,885,666 | - | +0.2 | |||
4,885,745 | + | -0.1 | |||
4,885,926 | + | Pf1N1B4_4425 | 0.13 | -2.0 | |
4,885,956 | + | Pf1N1B4_4425 | 0.16 | -0.4 | |
4,886,032 | - | Pf1N1B4_4425 | 0.22 | +0.5 | |
4,886,244 | + | -1.4 | |||
4,886,244 | + | Pf1N1B4_4425 | 0.40 | -2.7 | |
4,886,245 | - | Pf1N1B4_4425 | 0.40 | -2.4 | |
4,886,245 | - | Pf1N1B4_4425 | 0.40 | +0.4 | |
4,886,305 | + | +0.2 | |||
4,886,308 | - | Pf1N1B4_4425 | 0.45 | -0.4 | |
4,886,308 | - | Pf1N1B4_4425 | 0.45 | -0.6 | |
4,886,487 | + | Pf1N1B4_4425 | 0.60 | -1.7 | |
4,886,488 | - | Pf1N1B4_4425 | 0.60 | -0.8 | |
4,886,678 | - | Pf1N1B4_4425 | 0.75 | -1.4 | |
4,886,744 | - | Pf1N1B4_4425 | 0.81 | +1.2 | |
4,886,748 | - | Pf1N1B4_4425 | 0.81 | -0.4 | |
4,887,026 | + | +0.1 | |||
4,887,558 | - | Pf1N1B4_4426 | 0.80 | +0.6 |
Or see this region's nucleotide sequence