Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3030

Experiment: Cisplatin 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.006 mg/ml
3,407,403	+		Pf1N1B4_3029	0.42	-0.6
3,407,403	+		Pf1N1B4_3029	0.42	+2.4
3,407,403	+		Pf1N1B4_3029	0.42	-0.7
3,407,403	+		Pf1N1B4_3029	0.42	+1.4
3,407,403	+		Pf1N1B4_3029	0.42	+0.1
3,407,404	-		Pf1N1B4_3029	0.42	-0.5
3,407,404	-		Pf1N1B4_3029	0.42	+0.6
3,407,404	-		Pf1N1B4_3029	0.42	+0.1
3,407,404	-		Pf1N1B4_3029	0.42	-0.7
3,407,404	-		Pf1N1B4_3029	0.42	+0.4
3,407,406	+		Pf1N1B4_3029	0.42	-1.3
3,407,407	-		Pf1N1B4_3029	0.43	-0.4
3,407,412	+		Pf1N1B4_3029	0.43	+0.1
3,407,413	-		Pf1N1B4_3029	0.43	+0.5
3,407,413	-		Pf1N1B4_3029	0.43	-0.3
3,407,413	-		Pf1N1B4_3029	0.43	-0.3
3,407,413	-		Pf1N1B4_3029	0.43	+2.4
3,407,413	-		Pf1N1B4_3029	0.43	-0.3
3,407,591	+		Pf1N1B4_3029	0.55	+1.3
3,407,591	+		Pf1N1B4_3029	0.55	-0.3
3,407,592	-		Pf1N1B4_3029	0.55	+0.1
3,407,592	-		Pf1N1B4_3029	0.55	+1.4
3,407,626	+		Pf1N1B4_3029	0.58	-0.5
3,407,626	+		Pf1N1B4_3029	0.58	+0.1
3,407,626	+		Pf1N1B4_3029	0.58	-0.2
3,407,626	+		Pf1N1B4_3029	0.58	+0.1
3,407,626	+		Pf1N1B4_3029	0.58	+0.1
3,407,627	-		Pf1N1B4_3029	0.58	+0.6
3,407,627	-		Pf1N1B4_3029	0.58	-1.3
3,407,627	-		Pf1N1B4_3029	0.58	+0.6
3,407,627	-		Pf1N1B4_3029	0.58	+1.4
3,407,775	+		Pf1N1B4_3029	0.68	-0.5
3,407,836	-		Pf1N1B4_3029	0.72	+0.7
3,407,847	+		Pf1N1B4_3029	0.73	+1.6
3,407,847	+		Pf1N1B4_3029	0.73	-2.3
3,407,847	+				-1.5
3,407,847	+		Pf1N1B4_3029	0.73	-1.3
3,407,848	-		Pf1N1B4_3029	0.73	+1.1
3,407,848	-		Pf1N1B4_3029	0.73	+0.4
3,408,305	+				-0.9
3,408,306	-				+0.8
3,408,306	-				-0.9
3,408,306	-				+0.5
3,408,306	-				-0.3
3,408,307	+				+0.6
3,408,307	+				+0.6
3,408,307	+				+0.1
3,408,307	+				+0.5
3,408,307	+				-1.5
3,408,307	+				-1.9
3,408,307	+				-0.5
3,408,307	+				-0.5
3,408,307	+				-2.8
3,408,307	+				-0.5
3,408,307	+				+0.8
3,408,307	+				-0.1
3,408,307	+				+0.1
3,408,308	-				+2.4
3,408,308	-				+1.5
3,408,308	-				+2.4
3,408,308	-				+1.3
3,408,308	-				+0.5
3,408,322	+				+1.1
3,408,348	+				-1.1
3,408,348	+				+0.3
3,408,349	-				-0.9
3,408,349	-				+0.5
3,408,349	-				+2.0
3,408,351	+				-1.1
3,408,351	+				+0.6
3,408,352	-				-0.3
3,408,352	-				+0.4
3,408,352	-				+0.8
3,408,355	+				-2.3
3,408,355	+				+0.1
3,408,356	-				+0.3
3,408,356	-				+0.1
3,408,356	-				-0.9
3,408,356	-				-1.9
3,408,376	-				-1.3
3,408,376	-				-0.8
3,408,379	+				-0.4
3,408,379	+				+0.9
3,408,379	+				-0.5
3,408,379	+				+0.6
3,408,380	-				+1.4
3,408,380	-				-1.9
3,408,380	-				+0.5
3,408,380	-				+1.4
3,408,380	-				-1.5
3,408,380	-				+0.6
3,408,380	-				+0.8
3,408,549	+		Pf1N1B4_3030	0.19	+1.3
3,408,549	+		Pf1N1B4_3030	0.19	-1.5
3,408,550	-		Pf1N1B4_3030	0.19	+1.3
3,408,894	+		Pf1N1B4_3030	0.57	+0.5
3,408,894	+		Pf1N1B4_3030	0.57	+0.1
3,408,894	+		Pf1N1B4_3030	0.57	+1.1
3,408,895	-		Pf1N1B4_3030	0.57	+1.1
3,408,921	-		Pf1N1B4_3030	0.60	+1.1
3,408,936	+		Pf1N1B4_3030	0.61	+1.1
3,408,972	+		Pf1N1B4_3030	0.65	+0.8
3,408,972	+		Pf1N1B4_3030	0.65	+1.1
3,408,973	-		Pf1N1B4_3030	0.65	+0.5
3,408,973	-		Pf1N1B4_3030	0.65	+1.1
3,408,973	-		Pf1N1B4_3030	0.65	+0.1
3,408,973	-		Pf1N1B4_3030	0.65	+2.2
3,408,973	-		Pf1N1B4_3030	0.65	-2.3
3,409,333	-				-1.3
3,409,333	-				+0.1
3,409,333	-				-0.1
3,409,333	-				+1.1
3,409,333	-				+1.8
3,409,333	-				+1.1
3,409,334	+				+0.1
3,409,334	+				+1.9
3,409,334	+				+0.3
3,409,335	-				-2.3
3,409,335	-				+1.1
3,409,444	-				-0.4
3,409,455	+				-0.5
3,409,455	+				+0.1
3,409,455	+				+0.1
3,409,455	+				-0.8
3,409,456	-				+0.1
3,409,456	-				-1.2
3,409,456	-				-0.8
3,409,463	-				+0.5
3,409,463	-				-1.1
3,409,466	+				-1.3
3,409,466	+				+1.4
3,409,474	+				-1.5
3,409,495	+				-0.2
3,409,495	+				-0.5
3,409,495	+				+0.1
3,409,496	-				+0.1
3,409,496	-				-3.1
3,409,551	-				-0.3
3,409,603	+				+0.5
3,409,665	+				-0.0
3,409,665	+				+1.4
3,409,665	+				+2.1
3,409,665	+				+0.9
3,409,665	+				+1.1
3,409,665	+				+0.3
3,409,665	+				+0.6
3,409,666	-				-0.9
3,409,666	-				-2.5
3,409,666	-				-0.7
3,409,713	+				+2.4
3,409,713	+				+1.6
3,409,713	+				-0.7
3,409,713	+				+0.6
3,409,713	+				+1.6
3,409,714	-				+0.6
3,409,714	-				-0.0
3,409,714	-				-0.9
3,409,752	+				-0.9
3,409,752	+				-1.9
3,409,752	+				+1.6
3,409,752	+				-1.4
3,409,752	+				-0.2
3,409,764	+				-0.2
3,409,764	+				+1.4
3,409,764	+				-0.2
3,409,764	+				-0.9
3,409,764	+				-0.1
3,409,764	+				-0.4
3,409,765	-				-1.2
3,409,766	+				-0.5
3,409,766	+				+0.5
3,409,766	+				-0.9
3,409,767	-				-0.2
3,409,848	+		Pf1N1B4_3031	0.10	-1.5
3,409,848	+		Pf1N1B4_3031	0.10	+0.9
3,409,848	+		Pf1N1B4_3031	0.10	-0.9
3,409,848	+		Pf1N1B4_3031	0.10	-0.4
3,409,848	+		Pf1N1B4_3031	0.10	-1.3
3,409,848	+		Pf1N1B4_3031	0.10	+0.3
3,409,849	-		Pf1N1B4_3031	0.10	+1.6
3,409,849	-		Pf1N1B4_3031	0.10	-0.9
3,409,849	-		Pf1N1B4_3031	0.10	-1.9
3,409,849	-		Pf1N1B4_3031	0.10	+1.3
3,409,849	-		Pf1N1B4_3031	0.10	+0.8
3,409,849	-		Pf1N1B4_3031	0.10	-1.2
3,409,849	-		Pf1N1B4_3031	0.10	+1.5
3,409,872	+		Pf1N1B4_3031	0.11	-0.4
3,409,872	+		Pf1N1B4_3031	0.11	+2.1
3,409,872	+		Pf1N1B4_3031	0.11	-1.3
3,409,872	+		Pf1N1B4_3031	0.11	+0.5
3,409,872	+		Pf1N1B4_3031	0.11	+1.1
3,409,873	-		Pf1N1B4_3031	0.11	-2.3
3,409,873	-		Pf1N1B4_3031	0.11	+2.5
3,409,873	-		Pf1N1B4_3031	0.11	+2.1
3,409,873	-		Pf1N1B4_3031	0.11	-0.5
3,409,992	+		Pf1N1B4_3031	0.16	+0.3
3,409,992	+		Pf1N1B4_3031	0.16	+0.0
3,409,992	+				+0.0
3,409,992	+		Pf1N1B4_3031	0.16	+1.3
3,409,992	+		Pf1N1B4_3031	0.16	+0.6
3,409,993	-				+0.0
3,409,993	-				+1.6
3,409,993	-		Pf1N1B4_3031	0.16	-2.3
3,409,994	+		Pf1N1B4_3031	0.16	-1.5
3,409,994	+		Pf1N1B4_3031	0.16	+0.5
3,409,995	-		Pf1N1B4_3031	0.16	+2.4
3,410,123	-		Pf1N1B4_3031	0.20	-1.3
3,410,181	-		Pf1N1B4_3031	0.23	-0.2
3,410,222	+		Pf1N1B4_3031	0.24	+0.0
3,410,222	+		Pf1N1B4_3031	0.24	-1.2
3,410,223	-		Pf1N1B4_3031	0.24	-1.0
3,410,223	-		Pf1N1B4_3031	0.24	+0.6
3,410,223	-		Pf1N1B4_3031	0.24	-0.1
3,410,281	+		Pf1N1B4_3031	0.26	+0.3
3,410,282	-		Pf1N1B4_3031	0.26	-2.3