Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1754

Experiment: Cisplatin 0.006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.006 mg/ml
2,002,231	+		Pf1N1B4_1752	0.65	+0.4
2,002,231	+		Pf1N1B4_1752	0.65	+0.2
2,002,231	+		Pf1N1B4_1752	0.65	-0.4
2,002,231	+		Pf1N1B4_1752	0.65	+0.4
2,002,231	+				-0.6
2,002,231	+		Pf1N1B4_1752	0.65	+0.7
2,002,231	+		Pf1N1B4_1752	0.65	+0.6
2,002,232	-		Pf1N1B4_1752	0.65	+1.4
2,002,232	-		Pf1N1B4_1752	0.65	+0.4
2,002,232	-		Pf1N1B4_1752	0.65	-1.2
2,002,232	-		Pf1N1B4_1752	0.65	-0.6
2,002,345	+				-2.6
2,002,392	-				+0.4
2,002,456	+				-1.6
2,002,456	+				-0.2
2,002,457	-				-0.0
2,002,457	-				-0.2
2,002,464	+				-0.6
2,002,464	+				-0.2
2,002,549	+				-1.4
2,002,549	+				-0.9
2,002,550	-				-0.6
2,002,550	-				+0.7
2,002,550	-				+1.0
2,002,550	-				-0.3
2,002,557	+				-0.0
2,002,557	+				+2.8
2,002,558	-				-0.9
2,002,558	-				-0.5
2,002,559	+				-0.0
2,002,559	+				-1.2
2,002,559	+				+1.1
2,002,560	-				-1.2
2,002,560	-				-1.6
2,002,560	-				+1.0
2,002,631	+				-1.6
2,002,632	-				-0.3
2,002,632	-				-2.6
2,002,761	-		Pf1N1B4_1753	0.29	-2.9
2,002,761	-		Pf1N1B4_1753	0.29	-0.4
2,002,761	-		Pf1N1B4_1753	0.29	-0.6
2,002,764	+		Pf1N1B4_1753	0.30	-0.2
2,002,765	-		Pf1N1B4_1753	0.30	+1.1
2,002,948	+		Pf1N1B4_1753	0.64	-1.1
2,002,995	+		Pf1N1B4_1753	0.73	-0.6
2,002,995	+		Pf1N1B4_1753	0.73	+2.1
2,002,995	+		Pf1N1B4_1753	0.73	-0.6
2,002,995	+		Pf1N1B4_1753	0.73	-0.6
2,002,996	-		Pf1N1B4_1753	0.73	-0.7
2,002,996	-		Pf1N1B4_1753	0.73	-2.9
2,002,996	-		Pf1N1B4_1753	0.73	+0.4
2,002,996	-				+2.7
2,002,996	-		Pf1N1B4_1753	0.73	-1.2
2,002,996	-		Pf1N1B4_1753	0.73	-0.3
2,002,997	+		Pf1N1B4_1753	0.74	-0.2
2,003,095	+				-0.2
2,003,095	+				-1.2
2,003,095	+				+0.8
2,003,095	+				-0.6
2,003,096	-				-0.4
2,003,096	-				+1.2
2,003,096	-				-0.0
2,003,153	+				+1.0
2,003,153	+				-2.1
2,003,153	+				-0.2
2,003,154	-				-1.2
2,003,154	-				-2.4
2,003,154	-				+1.4
2,003,192	+				+0.4
2,003,192	+				+0.1
2,003,193	-				-0.4
2,003,239	+		Pf1N1B4_1754	0.11	+1.1
2,003,346	+		Pf1N1B4_1754	0.25	-0.8
2,003,363	+		Pf1N1B4_1754	0.27	-0.9
2,003,422	+		Pf1N1B4_1754	0.35	-3.1
2,003,422	+		Pf1N1B4_1754	0.35	-0.5
2,003,422	+		Pf1N1B4_1754	0.35	-2.4
2,003,422	+		Pf1N1B4_1754	0.35	+0.1
2,003,422	+		Pf1N1B4_1754	0.35	-1.2
2,003,809	+		Pf1N1B4_1754	0.86	-0.4
2,003,809	+		Pf1N1B4_1754	0.86	+0.4
2,003,809	+		Pf1N1B4_1754	0.86	-0.0
2,003,809	+		Pf1N1B4_1754	0.86	-0.6
2,003,810	-		Pf1N1B4_1754	0.86	-1.1
2,003,810	-		Pf1N1B4_1754	0.86	-0.6
2,003,972	+				+0.4
2,004,041	-				+1.0
2,004,066	+				+0.0
2,004,066	+				+0.4
2,004,066	+				-0.6
2,004,067	-				+2.0
2,004,067	-				+0.6
2,004,068	+				-0.3
2,004,068	+				-0.9
2,004,068	+				-0.6
2,004,068	+				-2.4
2,004,068	+				+0.4
2,004,069	-				-2.2
2,004,069	-				+1.0
2,004,069	-				+1.7
2,004,069	-				-1.6
2,004,069	-				-2.2
2,004,069	-				+2.0
2,004,091	+				-0.1
2,004,091	+				+2.7
2,004,091	+				-0.6
2,004,091	+				-0.9
2,004,092	-				+0.2
2,004,092	-				-0.9
2,004,092	-				-0.1
2,004,092	-				+0.4
2,004,092	-				+0.1
2,004,269	+		Pf1N1B4_1755	0.25	+0.4
2,004,269	+		Pf1N1B4_1755	0.25	-0.4
2,004,269	+		Pf1N1B4_1755	0.25	-1.2
2,004,270	-		Pf1N1B4_1755	0.25	-1.2
2,004,270	-		Pf1N1B4_1755	0.25	-0.4
2,004,347	+		Pf1N1B4_1755	0.33	-0.9
2,004,347	+		Pf1N1B4_1755	0.33	-0.5
2,004,347	+		Pf1N1B4_1755	0.33	+0.6
2,004,348	-		Pf1N1B4_1755	0.33	-1.4
2,004,348	-		Pf1N1B4_1755	0.33	-0.6
2,004,525	+		Pf1N1B4_1755	0.52	+0.1
2,004,748	-		Pf1N1B4_1755	0.75	-0.5
2,004,748	-		Pf1N1B4_1755	0.75	-0.6
2,004,748	-		Pf1N1B4_1755	0.75	+1.3