Experiment: Phosphomycin 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3281 and Ac3H11_3282 are separated by 216 nucleotides Ac3H11_3282 and Ac3H11_3283 are separated by 315 nucleotides
Ac3H11_3281 - UDP-galactose-lipid carrier transferase (EC 2.-.-.-), at 12,646 to 13,491
_3281
Ac3H11_3282 - NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4), at 13,708 to 15,012
_3282
Ac3H11_3283 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 15,328 to 16,983
_3283
Position (kb) 13
14
15
16 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 12.838 kb on + strand, within Ac3H11_3281 at 12.838 kb on + strand, within Ac3H11_3281 at 12.838 kb on + strand, within Ac3H11_3281 at 12.839 kb on - strand, within Ac3H11_3281 at 12.839 kb on - strand, within Ac3H11_3281 at 12.839 kb on - strand, within Ac3H11_3281 at 12.839 kb on - strand, within Ac3H11_3281 at 12.839 kb on - strand, within Ac3H11_3281 at 12.853 kb on + strand, within Ac3H11_3281 at 12.854 kb on - strand, within Ac3H11_3281 at 12.854 kb on - strand, within Ac3H11_3281 at 12.854 kb on - strand, within Ac3H11_3281 at 12.854 kb on - strand, within Ac3H11_3281 at 12.854 kb on - strand, within Ac3H11_3281 at 12.885 kb on + strand, within Ac3H11_3281 at 12.885 kb on + strand, within Ac3H11_3281 at 12.885 kb on + strand, within Ac3H11_3281 at 12.886 kb on - strand at 12.886 kb on - strand, within Ac3H11_3281 at 12.994 kb on + strand, within Ac3H11_3281 at 12.994 kb on + strand, within Ac3H11_3281 at 12.994 kb on + strand, within Ac3H11_3281 at 12.994 kb on + strand, within Ac3H11_3281 at 12.994 kb on + strand, within Ac3H11_3281 at 12.995 kb on - strand, within Ac3H11_3281 at 12.995 kb on - strand, within Ac3H11_3281 at 12.995 kb on - strand, within Ac3H11_3281 at 12.995 kb on - strand, within Ac3H11_3281 at 13.060 kb on + strand, within Ac3H11_3281 at 13.060 kb on + strand, within Ac3H11_3281 at 13.060 kb on + strand, within Ac3H11_3281 at 13.060 kb on + strand, within Ac3H11_3281 at 13.060 kb on + strand, within Ac3H11_3281 at 13.060 kb on + strand, within Ac3H11_3281 at 13.060 kb on + strand, within Ac3H11_3281 at 13.060 kb on + strand, within Ac3H11_3281 at 13.060 kb on + strand, within Ac3H11_3281 at 13.060 kb on + strand, within Ac3H11_3281 at 13.061 kb on - strand, within Ac3H11_3281 at 13.061 kb on - strand, within Ac3H11_3281 at 13.315 kb on + strand, within Ac3H11_3281 at 13.315 kb on + strand, within Ac3H11_3281 at 13.315 kb on + strand, within Ac3H11_3281 at 13.315 kb on + strand, within Ac3H11_3281 at 13.316 kb on - strand, within Ac3H11_3281 at 13.316 kb on - strand, within Ac3H11_3281 at 13.489 kb on + strand at 13.489 kb on + strand at 13.489 kb on + strand at 13.489 kb on + strand at 13.489 kb on + strand at 13.490 kb on - strand at 13.490 kb on - strand at 13.490 kb on - strand at 13.490 kb on - strand at 13.490 kb on - strand at 13.586 kb on + strand at 13.586 kb on + strand at 13.586 kb on + strand at 13.587 kb on - strand at 13.587 kb on - strand at 13.668 kb on + strand at 13.668 kb on + strand at 13.668 kb on + strand at 13.668 kb on + strand at 13.668 kb on + strand at 13.668 kb on + strand at 13.668 kb on + strand at 13.668 kb on + strand at 13.668 kb on + strand at 13.668 kb on + strand at 13.669 kb on - strand at 13.669 kb on - strand at 13.669 kb on - strand at 13.669 kb on - strand at 13.669 kb on - strand at 13.669 kb on - strand at 13.669 kb on - strand at 13.669 kb on - strand at 13.669 kb on - strand at 13.669 kb on - strand at 13.669 kb on - strand at 14.162 kb on + strand, within Ac3H11_3282 at 15.010 kb on + strand at 15.011 kb on - strand at 15.011 kb on - strand at 15.113 kb on + strand at 15.113 kb on + strand at 15.113 kb on + strand at 15.114 kb on - strand at 15.114 kb on - strand at 15.114 kb on - strand at 15.114 kb on - strand at 15.235 kb on + strand at 15.235 kb on + strand at 15.236 kb on - strand at 15.239 kb on + strand at 15.239 kb on + strand at 15.240 kb on - strand at 15.240 kb on - strand at 15.240 kb on - strand at 15.245 kb on + strand at 15.245 kb on + strand at 15.245 kb on + strand at 15.245 kb on + strand at 15.246 kb on - strand at 15.246 kb on - strand at 15.302 kb on + strand at 15.302 kb on + strand at 15.302 kb on + strand at 15.302 kb on + strand at 15.303 kb on - strand at 15.303 kb on - strand at 15.303 kb on - strand at 15.303 kb on - strand at 15.303 kb on - strand at 15.303 kb on - strand at 15.303 kb on - strand at 15.466 kb on + strand at 15.466 kb on + strand at 15.466 kb on + strand at 15.466 kb on + strand at 15.490 kb on + strand at 15.491 kb on - strand at 15.491 kb on - strand at 15.574 kb on + strand, within Ac3H11_3283 at 15.575 kb on - strand, within Ac3H11_3283 at 15.657 kb on + strand, within Ac3H11_3283 at 15.658 kb on - strand, within Ac3H11_3283 at 15.658 kb on - strand, within Ac3H11_3283 at 15.658 kb on - strand, within Ac3H11_3283 at 15.658 kb on - strand, within Ac3H11_3283 at 15.658 kb on - strand, within Ac3H11_3283 at 15.775 kb on + strand, within Ac3H11_3283 at 15.775 kb on + strand, within Ac3H11_3283 at 15.775 kb on + strand, within Ac3H11_3283 at 15.775 kb on + strand, within Ac3H11_3283 at 15.775 kb on + strand, within Ac3H11_3283 at 15.776 kb on - strand, within Ac3H11_3283 at 15.776 kb on - strand, within Ac3H11_3283 at 15.776 kb on - strand, within Ac3H11_3283 at 15.892 kb on + strand, within Ac3H11_3283 at 15.892 kb on + strand, within Ac3H11_3283 at 15.907 kb on + strand, within Ac3H11_3283 at 15.907 kb on + strand, within Ac3H11_3283 at 15.907 kb on + strand, within Ac3H11_3283 at 15.907 kb on + strand, within Ac3H11_3283
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.02 mg/ml remove 12,838 + Ac3H11_3281 0.23 +0.8 12,838 + Ac3H11_3281 0.23 -0.1 12,838 + Ac3H11_3281 0.23 -0.1 12,839 - Ac3H11_3281 0.23 +1.0 12,839 - Ac3H11_3281 0.23 +0.6 12,839 - Ac3H11_3281 0.23 +1.1 12,839 - Ac3H11_3281 0.23 -0.3 12,839 - Ac3H11_3281 0.23 +0.5 12,853 + Ac3H11_3281 0.24 +0.8 12,854 - Ac3H11_3281 0.25 -0.3 12,854 - Ac3H11_3281 0.25 +0.2 12,854 - Ac3H11_3281 0.25 -0.1 12,854 - Ac3H11_3281 0.25 -0.8 12,854 - Ac3H11_3281 0.25 -0.2 12,885 + Ac3H11_3281 0.28 -0.1 12,885 + Ac3H11_3281 0.28 -0.1 12,885 + Ac3H11_3281 0.28 +0.8 12,886 - +0.7 12,886 - Ac3H11_3281 0.28 -0.0 12,994 + Ac3H11_3281 0.41 +0.2 12,994 + Ac3H11_3281 0.41 +1.6 12,994 + Ac3H11_3281 0.41 -0.2 12,994 + Ac3H11_3281 0.41 -0.3 12,994 + Ac3H11_3281 0.41 +0.8 12,995 - Ac3H11_3281 0.41 +1.0 12,995 - Ac3H11_3281 0.41 +1.3 12,995 - Ac3H11_3281 0.41 +0.8 12,995 - Ac3H11_3281 0.41 +0.1 13,060 + Ac3H11_3281 0.49 +0.0 13,060 + Ac3H11_3281 0.49 -3.8 13,060 + Ac3H11_3281 0.49 +2.0 13,060 + Ac3H11_3281 0.49 +1.0 13,060 + Ac3H11_3281 0.49 +0.1 13,060 + Ac3H11_3281 0.49 +0.1 13,060 + Ac3H11_3281 0.49 -0.6 13,060 + Ac3H11_3281 0.49 +0.5 13,060 + Ac3H11_3281 0.49 +0.7 13,060 + Ac3H11_3281 0.49 +0.5 13,061 - Ac3H11_3281 0.49 -2.3 13,061 - Ac3H11_3281 0.49 +0.2 13,315 + Ac3H11_3281 0.79 -0.4 13,315 + Ac3H11_3281 0.79 +1.5 13,315 + Ac3H11_3281 0.79 +1.1 13,315 + Ac3H11_3281 0.79 -0.4 13,316 - Ac3H11_3281 0.79 -0.2 13,316 - Ac3H11_3281 0.79 -2.8 13,489 + +1.1 13,489 + -0.9 13,489 + +0.3 13,489 + -1.3 13,489 + +0.7 13,490 - +0.6 13,490 - +1.4 13,490 - +0.4 13,490 - +0.5 13,490 - +1.8 13,586 + -2.2 13,586 + +1.4 13,586 + +0.1 13,587 - +0.8 13,587 - +1.1 13,668 + -1.5 13,668 + +0.2 13,668 + -0.0 13,668 + +0.8 13,668 + -0.1 13,668 + +0.9 13,668 + +0.4 13,668 + -0.0 13,668 + -1.6 13,668 + -0.0 13,669 - -1.1 13,669 - +0.7 13,669 - +0.6 13,669 - -0.2 13,669 - -1.9 13,669 - -0.2 13,669 - +0.4 13,669 - +0.1 13,669 - +0.2 13,669 - -0.6 13,669 - -1.3 14,162 + Ac3H11_3282 0.35 -0.3 15,010 + -2.3 15,011 - +0.4 15,011 - +0.2 15,113 + +1.5 15,113 + +0.3 15,113 + +0.3 15,114 - -0.4 15,114 - -0.1 15,114 - +1.7 15,114 - +0.1 15,235 + +0.2 15,235 + -0.1 15,236 - +0.7 15,239 + +0.5 15,239 + +0.0 15,240 - +0.8 15,240 - +0.6 15,240 - -1.4 15,245 + +0.2 15,245 + -0.3 15,245 + +0.4 15,245 + -0.3 15,246 - -2.8 15,246 - +0.4 15,302 + +0.2 15,302 + -0.3 15,302 + +0.9 15,302 + +0.4 15,303 - +0.7 15,303 - +0.9 15,303 - +0.5 15,303 - -3.4 15,303 - +0.4 15,303 - -0.1 15,303 - -0.6 15,466 + +2.7 15,466 + -0.1 15,466 + +1.1 15,466 + +0.4 15,490 + +1.8 15,491 - +0.4 15,491 - -0.3 15,574 + Ac3H11_3283 0.15 -2.2 15,575 - Ac3H11_3283 0.15 +1.2 15,657 + Ac3H11_3283 0.20 +0.5 15,658 - Ac3H11_3283 0.20 -0.9 15,658 - Ac3H11_3283 0.20 +0.2 15,658 - Ac3H11_3283 0.20 -0.5 15,658 - Ac3H11_3283 0.20 +0.0 15,658 - Ac3H11_3283 0.20 +0.5 15,775 + Ac3H11_3283 0.27 -1.0 15,775 + Ac3H11_3283 0.27 +2.5 15,775 + Ac3H11_3283 0.27 -0.8 15,775 + Ac3H11_3283 0.27 +0.1 15,775 + Ac3H11_3283 0.27 +0.4 15,776 - Ac3H11_3283 0.27 +1.0 15,776 - Ac3H11_3283 0.27 -1.4 15,776 - Ac3H11_3283 0.27 +2.5 15,892 + Ac3H11_3283 0.34 -1.5 15,892 + Ac3H11_3283 0.34 -0.5 15,907 + Ac3H11_3283 0.35 +0.5 15,907 + Ac3H11_3283 0.35 -0.3 15,907 + Ac3H11_3283 0.35 +1.1 15,907 + Ac3H11_3283 0.35 +0.8
Or see this region's nucleotide sequence