Experiment: Phosphomycin 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2537 and Ac3H11_2538 are separated by 68 nucleotides Ac3H11_2538 and Ac3H11_2539 are separated by 141 nucleotides Ac3H11_2539 and Ac3H11_2981 are separated by 110 nucleotides Ac3H11_2981 and Ac3H11_2540 are separated by 217 nucleotides Ac3H11_2540 and Ac3H11_2541 are separated by 230 nucleotides
Ac3H11_2537 - Cell division protein BolA, at 815,363 to 815,629
_2537
Ac3H11_2538 - Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8), at 815,698 to 816,483
_2538
Ac3H11_2539 - Mlr1315 protein, at 816,625 to 817,491
_2539
Ac3H11_2981 - tRNA-Pro-TGG, at 817,602 to 817,675
_2981
Ac3H11_2540 - Translation initiation factor 1, at 817,893 to 818,141
_2540
Ac3H11_2541 - nitrite efflux transporter, HPP family <small>(from data)</small>, at 818,372 to 819,511
_2541
Position (kb) 816
817
818 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 816.481 kb on + strand at 816.481 kb on + strand at 816.482 kb on - strand at 816.534 kb on + strand at 816.534 kb on + strand at 816.534 kb on + strand at 816.535 kb on - strand at 816.626 kb on + strand at 816.627 kb on - strand at 816.692 kb on + strand at 816.692 kb on + strand at 816.692 kb on + strand at 816.692 kb on + strand at 816.692 kb on + strand at 816.692 kb on + strand at 816.692 kb on + strand at 816.692 kb on + strand at 816.692 kb on + strand at 816.692 kb on + strand at 816.692 kb on + strand at 816.692 kb on + strand at 816.692 kb on + strand at 816.692 kb on + strand at 816.692 kb on + strand at 816.692 kb on + strand at 816.692 kb on + strand at 816.692 kb on + strand at 816.693 kb on - strand at 816.693 kb on - strand at 816.693 kb on - strand at 816.693 kb on - strand at 816.693 kb on - strand at 816.693 kb on - strand at 816.693 kb on - strand at 816.693 kb on - strand at 816.693 kb on - strand at 816.693 kb on - strand at 816.693 kb on - strand at 816.693 kb on - strand at 816.693 kb on - strand at 816.695 kb on + strand at 816.695 kb on + strand at 816.695 kb on + strand at 816.695 kb on + strand at 816.696 kb on - strand at 816.696 kb on - strand at 816.696 kb on - strand at 816.696 kb on - strand at 816.696 kb on - strand at 816.696 kb on - strand at 816.842 kb on + strand, within Ac3H11_2539 at 816.842 kb on + strand, within Ac3H11_2539 at 816.842 kb on + strand, within Ac3H11_2539 at 816.842 kb on + strand, within Ac3H11_2539 at 816.842 kb on + strand, within Ac3H11_2539 at 816.842 kb on + strand, within Ac3H11_2539 at 816.842 kb on + strand, within Ac3H11_2539 at 816.842 kb on + strand, within Ac3H11_2539 at 816.842 kb on + strand, within Ac3H11_2539 at 816.842 kb on + strand, within Ac3H11_2539 at 816.842 kb on + strand, within Ac3H11_2539 at 816.842 kb on + strand, within Ac3H11_2539 at 816.842 kb on + strand, within Ac3H11_2539 at 816.842 kb on + strand, within Ac3H11_2539 at 816.842 kb on + strand, within Ac3H11_2539 at 816.842 kb on + strand, within Ac3H11_2539 at 816.843 kb on - strand, within Ac3H11_2539 at 816.843 kb on - strand, within Ac3H11_2539 at 816.843 kb on - strand, within Ac3H11_2539 at 816.843 kb on - strand, within Ac3H11_2539 at 816.843 kb on - strand, within Ac3H11_2539 at 816.843 kb on - strand, within Ac3H11_2539 at 816.843 kb on - strand, within Ac3H11_2539 at 816.843 kb on - strand, within Ac3H11_2539 at 816.843 kb on - strand, within Ac3H11_2539 at 816.843 kb on - strand, within Ac3H11_2539 at 816.843 kb on - strand, within Ac3H11_2539 at 816.843 kb on - strand, within Ac3H11_2539 at 816.843 kb on - strand, within Ac3H11_2539 at 816.843 kb on - strand, within Ac3H11_2539 at 816.843 kb on - strand, within Ac3H11_2539 at 816.843 kb on - strand, within Ac3H11_2539 at 816.868 kb on + strand, within Ac3H11_2539 at 816.868 kb on + strand, within Ac3H11_2539 at 816.869 kb on - strand, within Ac3H11_2539 at 817.061 kb on + strand, within Ac3H11_2539 at 817.061 kb on + strand, within Ac3H11_2539 at 817.061 kb on + strand, within Ac3H11_2539 at 817.061 kb on + strand, within Ac3H11_2539 at 817.061 kb on + strand, within Ac3H11_2539 at 817.062 kb on - strand, within Ac3H11_2539 at 817.062 kb on - strand, within Ac3H11_2539 at 817.358 kb on + strand, within Ac3H11_2539 at 817.509 kb on + strand at 817.510 kb on - strand at 817.895 kb on - strand at 818.166 kb on - strand at 818.213 kb on - strand at 818.213 kb on - strand at 818.213 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.02 mg/ml remove 816,481 + -2.1 816,481 + +1.1 816,482 - -3.7 816,534 + +1.0 816,534 + -0.8 816,534 + -0.9 816,535 - +1.5 816,626 + +1.0 816,627 - -2.1 816,692 + -0.7 816,692 + -0.7 816,692 + -0.8 816,692 + -1.2 816,692 + -0.2 816,692 + -0.5 816,692 + -1.4 816,692 + -1.5 816,692 + -0.5 816,692 + -0.9 816,692 + -1.6 816,692 + +0.9 816,692 + -2.2 816,692 + +0.1 816,692 + -1.2 816,692 + -1.7 816,692 + -0.9 816,692 + -0.8 816,693 - -0.1 816,693 - -0.8 816,693 - -1.1 816,693 - -1.8 816,693 - +0.1 816,693 - -1.7 816,693 - -2.4 816,693 - -0.8 816,693 - -2.1 816,693 - -0.7 816,693 - +1.0 816,693 - +0.8 816,693 - -0.2 816,695 + -1.1 816,695 + +1.1 816,695 + +0.4 816,695 + +1.2 816,696 - -3.1 816,696 - -0.5 816,696 - -2.4 816,696 - +0.5 816,696 - +1.5 816,696 - -1.1 816,842 + Ac3H11_2539 0.25 +0.8 816,842 + Ac3H11_2539 0.25 +0.2 816,842 + Ac3H11_2539 0.25 +0.4 816,842 + Ac3H11_2539 0.25 -0.3 816,842 + Ac3H11_2539 0.25 -2.9 816,842 + Ac3H11_2539 0.25 -1.8 816,842 + Ac3H11_2539 0.25 -0.1 816,842 + Ac3H11_2539 0.25 +1.8 816,842 + Ac3H11_2539 0.25 -1.3 816,842 + Ac3H11_2539 0.25 -0.2 816,842 + Ac3H11_2539 0.25 +0.6 816,842 + Ac3H11_2539 0.25 -0.5 816,842 + Ac3H11_2539 0.25 +0.5 816,842 + Ac3H11_2539 0.25 -0.3 816,842 + Ac3H11_2539 0.25 -3.2 816,842 + Ac3H11_2539 0.25 -0.3 816,843 - Ac3H11_2539 0.25 +0.3 816,843 - Ac3H11_2539 0.25 +0.3 816,843 - Ac3H11_2539 0.25 -0.8 816,843 - Ac3H11_2539 0.25 +0.1 816,843 - Ac3H11_2539 0.25 -0.3 816,843 - Ac3H11_2539 0.25 -0.8 816,843 - Ac3H11_2539 0.25 -2.2 816,843 - Ac3H11_2539 0.25 -0.5 816,843 - Ac3H11_2539 0.25 +0.3 816,843 - Ac3H11_2539 0.25 -0.7 816,843 - Ac3H11_2539 0.25 -0.8 816,843 - Ac3H11_2539 0.25 -0.9 816,843 - Ac3H11_2539 0.25 -1.5 816,843 - Ac3H11_2539 0.25 +0.2 816,843 - Ac3H11_2539 0.25 -0.2 816,843 - Ac3H11_2539 0.25 -0.7 816,868 + Ac3H11_2539 0.28 +0.7 816,868 + Ac3H11_2539 0.28 -0.6 816,869 - Ac3H11_2539 0.28 -2.0 817,061 + Ac3H11_2539 0.50 +0.3 817,061 + Ac3H11_2539 0.50 -2.4 817,061 + Ac3H11_2539 0.50 -3.4 817,061 + Ac3H11_2539 0.50 -2.7 817,061 + Ac3H11_2539 0.50 -1.7 817,062 - Ac3H11_2539 0.50 +0.8 817,062 - Ac3H11_2539 0.50 +0.3 817,358 + Ac3H11_2539 0.85 +0.3 817,509 + -0.7 817,510 - -0.2 817,895 - -0.3 818,166 - -1.2 818,213 - +0.6 818,213 - +1.0 818,213 - -1.8
Or see this region's nucleotide sequence