Experiment: Phosphomycin 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_204 and Ac3H11_205 overlap by 8 nucleotides Ac3H11_205 and Ac3H11_206 are separated by 99 nucleotides Ac3H11_206 and Ac3H11_207 are separated by 216 nucleotides
Ac3H11_204 - Acetate permease ActP (cation/acetate symporter), at 14,142 to 16,241
_204
Ac3H11_205 - FIG152265: Sodium:solute symporter associated protein, at 16,234 to 16,533
_205
Ac3H11_206 - Phosphoenolpyruvate synthase (EC 2.7.9.2), at 16,633 to 19,023
_206
Ac3H11_207 - FIG137360: hypothetical protein, at 19,240 to 20,109
_207
Position (kb) 16
17
18
19
20 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 15.650 kb on + strand, within Ac3H11_204 at 15.651 kb on - strand, within Ac3H11_204 at 15.651 kb on - strand, within Ac3H11_204 at 15.679 kb on + strand, within Ac3H11_204 at 15.679 kb on + strand, within Ac3H11_204 at 15.679 kb on + strand, within Ac3H11_204 at 15.679 kb on + strand, within Ac3H11_204 at 15.679 kb on + strand, within Ac3H11_204 at 15.680 kb on - strand, within Ac3H11_204 at 15.680 kb on - strand, within Ac3H11_204 at 15.680 kb on - strand, within Ac3H11_204 at 15.697 kb on + strand, within Ac3H11_204 at 15.698 kb on - strand, within Ac3H11_204 at 15.698 kb on - strand, within Ac3H11_204 at 15.698 kb on - strand, within Ac3H11_204 at 15.698 kb on - strand, within Ac3H11_204 at 15.698 kb on - strand, within Ac3H11_204 at 15.787 kb on + strand, within Ac3H11_204 at 15.787 kb on + strand, within Ac3H11_204 at 15.787 kb on + strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.862 kb on + strand, within Ac3H11_204 at 15.862 kb on + strand, within Ac3H11_204 at 15.863 kb on - strand, within Ac3H11_204 at 15.863 kb on - strand, within Ac3H11_204 at 15.910 kb on + strand, within Ac3H11_204 at 15.911 kb on - strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.012 kb on + strand, within Ac3H11_204 at 16.012 kb on + strand, within Ac3H11_204 at 16.012 kb on + strand, within Ac3H11_204 at 16.012 kb on + strand, within Ac3H11_204 at 16.013 kb on - strand, within Ac3H11_204 at 16.040 kb on - strand at 16.040 kb on - strand at 16.040 kb on - strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.166 kb on - strand at 16.166 kb on - strand at 16.166 kb on - strand at 16.166 kb on - strand at 16.166 kb on - strand at 16.166 kb on - strand at 16.199 kb on - strand at 16.199 kb on - strand at 16.328 kb on + strand, within Ac3H11_205 at 16.329 kb on - strand, within Ac3H11_205 at 16.329 kb on - strand, within Ac3H11_205 at 16.383 kb on - strand, within Ac3H11_205 at 16.433 kb on + strand, within Ac3H11_205 at 16.433 kb on + strand, within Ac3H11_205 at 16.433 kb on + strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.763 kb on + strand at 16.763 kb on + strand at 16.763 kb on + strand at 16.763 kb on + strand at 16.763 kb on + strand at 16.763 kb on + strand at 16.763 kb on + strand at 16.764 kb on - strand at 16.764 kb on - strand at 16.764 kb on - strand at 16.989 kb on + strand, within Ac3H11_206 at 16.990 kb on - strand, within Ac3H11_206 at 16.990 kb on - strand, within Ac3H11_206 at 16.990 kb on - strand, within Ac3H11_206 at 16.990 kb on - strand, within Ac3H11_206 at 17.171 kb on + strand, within Ac3H11_206 at 17.171 kb on + strand, within Ac3H11_206 at 17.172 kb on - strand, within Ac3H11_206 at 17.222 kb on + strand, within Ac3H11_206 at 17.320 kb on + strand, within Ac3H11_206 at 17.320 kb on + strand, within Ac3H11_206 at 17.320 kb on + strand, within Ac3H11_206 at 17.320 kb on + strand, within Ac3H11_206 at 17.321 kb on - strand, within Ac3H11_206 at 17.345 kb on + strand, within Ac3H11_206 at 17.346 kb on - strand, within Ac3H11_206 at 17.621 kb on + strand, within Ac3H11_206 at 17.621 kb on + strand, within Ac3H11_206 at 17.621 kb on + strand, within Ac3H11_206 at 17.622 kb on - strand, within Ac3H11_206 at 17.622 kb on - strand, within Ac3H11_206 at 17.622 kb on - strand, within Ac3H11_206 at 17.622 kb on - strand, within Ac3H11_206 at 17.622 kb on - strand, within Ac3H11_206 at 17.622 kb on - strand, within Ac3H11_206 at 17.718 kb on + strand, within Ac3H11_206 at 17.718 kb on + strand, within Ac3H11_206 at 17.961 kb on - strand, within Ac3H11_206 at 18.023 kb on + strand, within Ac3H11_206 at 18.023 kb on + strand, within Ac3H11_206 at 18.023 kb on + strand, within Ac3H11_206 at 18.023 kb on + strand, within Ac3H11_206 at 18.023 kb on + strand, within Ac3H11_206 at 18.023 kb on + strand, within Ac3H11_206 at 18.024 kb on - strand, within Ac3H11_206 at 18.024 kb on - strand, within Ac3H11_206 at 18.024 kb on - strand, within Ac3H11_206 at 18.024 kb on - strand, within Ac3H11_206 at 18.024 kb on - strand, within Ac3H11_206 at 18.024 kb on - strand, within Ac3H11_206 at 18.077 kb on + strand, within Ac3H11_206 at 18.078 kb on - strand, within Ac3H11_206 at 18.078 kb on - strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.299 kb on + strand, within Ac3H11_206 at 18.300 kb on - strand, within Ac3H11_206 at 18.300 kb on - strand, within Ac3H11_206 at 18.300 kb on - strand, within Ac3H11_206 at 18.300 kb on - strand, within Ac3H11_206 at 18.300 kb on - strand, within Ac3H11_206 at 18.300 kb on - strand, within Ac3H11_206 at 18.300 kb on - strand, within Ac3H11_206 at 18.300 kb on - strand, within Ac3H11_206 at 18.350 kb on + strand, within Ac3H11_206 at 18.521 kb on + strand, within Ac3H11_206 at 18.521 kb on + strand, within Ac3H11_206 at 18.522 kb on - strand, within Ac3H11_206 at 18.522 kb on - strand, within Ac3H11_206 at 18.522 kb on - strand, within Ac3H11_206 at 18.840 kb on - strand at 18.942 kb on + strand at 18.943 kb on - strand at 18.989 kb on - strand at 19.122 kb on + strand at 19.122 kb on + strand at 19.123 kb on - strand at 19.123 kb on - strand at 19.123 kb on - strand at 19.153 kb on + strand at 19.153 kb on + strand at 19.154 kb on - strand at 19.154 kb on - strand at 19.154 kb on - strand at 19.154 kb on - strand at 19.168 kb on + strand at 19.169 kb on - strand at 19.169 kb on - strand at 19.304 kb on + strand at 19.304 kb on + strand at 19.305 kb on - strand at 19.651 kb on + strand, within Ac3H11_207 at 19.651 kb on + strand, within Ac3H11_207 at 19.652 kb on - strand, within Ac3H11_207 at 19.780 kb on + strand, within Ac3H11_207 at 19.781 kb on - strand, within Ac3H11_207 at 19.781 kb on - strand, within Ac3H11_207 at 19.781 kb on - strand, within Ac3H11_207 at 19.816 kb on + strand, within Ac3H11_207 at 19.816 kb on + strand, within Ac3H11_207 at 19.816 kb on + strand, within Ac3H11_207 at 19.816 kb on + strand, within Ac3H11_207 at 19.817 kb on - strand, within Ac3H11_207 at 19.954 kb on + strand, within Ac3H11_207
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.02 mg/ml remove 15,650 + Ac3H11_204 0.72 +0.1 15,651 - Ac3H11_204 0.72 -0.8 15,651 - Ac3H11_204 0.72 -0.4 15,679 + Ac3H11_204 0.73 -1.9 15,679 + Ac3H11_204 0.73 -0.6 15,679 + Ac3H11_204 0.73 +0.7 15,679 + Ac3H11_204 0.73 +0.4 15,679 + Ac3H11_204 0.73 -0.7 15,680 - Ac3H11_204 0.73 -0.4 15,680 - Ac3H11_204 0.73 -0.2 15,680 - Ac3H11_204 0.73 -0.1 15,697 + Ac3H11_204 0.74 +0.7 15,698 - Ac3H11_204 0.74 -2.3 15,698 - Ac3H11_204 0.74 -0.4 15,698 - Ac3H11_204 0.74 -0.8 15,698 - Ac3H11_204 0.74 -1.9 15,698 - Ac3H11_204 0.74 -0.4 15,787 + Ac3H11_204 0.78 -0.4 15,787 + Ac3H11_204 0.78 +0.4 15,787 + Ac3H11_204 0.78 +0.1 15,788 - Ac3H11_204 0.78 -0.1 15,788 - Ac3H11_204 0.78 -0.5 15,788 - Ac3H11_204 0.78 -0.7 15,788 - Ac3H11_204 0.78 +0.1 15,788 - Ac3H11_204 0.78 -1.1 15,788 - Ac3H11_204 0.78 +0.7 15,862 + Ac3H11_204 0.82 -0.6 15,862 + Ac3H11_204 0.82 +0.4 15,863 - Ac3H11_204 0.82 +0.6 15,863 - Ac3H11_204 0.82 +1.4 15,910 + Ac3H11_204 0.84 -0.2 15,911 - Ac3H11_204 0.84 +0.6 15,979 + Ac3H11_204 0.87 +1.5 15,979 + Ac3H11_204 0.87 -0.6 15,979 + +0.4 15,979 + Ac3H11_204 0.87 +0.0 15,979 + Ac3H11_204 0.87 +0.0 15,979 + Ac3H11_204 0.87 -0.3 15,979 + Ac3H11_204 0.87 -3.4 15,979 + Ac3H11_204 0.87 -0.2 15,979 + Ac3H11_204 0.87 -0.3 15,980 - Ac3H11_204 0.88 -0.9 15,980 - Ac3H11_204 0.88 -1.1 15,980 - Ac3H11_204 0.88 +0.6 15,980 - Ac3H11_204 0.88 +0.2 15,980 - Ac3H11_204 0.88 -0.3 15,980 - Ac3H11_204 0.88 -0.9 15,980 - Ac3H11_204 0.88 +0.5 16,009 + Ac3H11_204 0.89 +0.9 16,009 + Ac3H11_204 0.89 +1.8 16,009 + Ac3H11_204 0.89 -1.4 16,009 + Ac3H11_204 0.89 -1.2 16,009 + Ac3H11_204 0.89 +0.6 16,009 + Ac3H11_204 0.89 +0.4 16,010 - Ac3H11_204 0.89 -0.5 16,010 - Ac3H11_204 0.89 +0.8 16,010 - Ac3H11_204 0.89 +0.7 16,010 - Ac3H11_204 0.89 -0.6 16,010 - Ac3H11_204 0.89 -0.1 16,010 - Ac3H11_204 0.89 -0.6 16,010 - Ac3H11_204 0.89 +0.1 16,010 - Ac3H11_204 0.89 -0.2 16,010 - Ac3H11_204 0.89 -0.1 16,010 - Ac3H11_204 0.89 -0.8 16,012 + Ac3H11_204 0.89 -1.4 16,012 + Ac3H11_204 0.89 +0.8 16,012 + Ac3H11_204 0.89 -1.3 16,012 + Ac3H11_204 0.89 +0.1 16,013 - Ac3H11_204 0.89 -0.3 16,040 - -0.2 16,040 - +0.8 16,040 - -0.4 16,165 + +0.4 16,165 + -0.3 16,165 + -0.4 16,165 + +0.8 16,165 + -1.6 16,165 + +0.9 16,165 + +0.0 16,166 - -0.4 16,166 - -1.0 16,166 - +0.2 16,166 - +0.7 16,166 - -1.4 16,166 - -2.1 16,199 - -1.0 16,199 - -0.0 16,328 + Ac3H11_205 0.31 +0.2 16,329 - Ac3H11_205 0.32 +0.5 16,329 - Ac3H11_205 0.32 +0.6 16,383 - Ac3H11_205 0.50 +0.6 16,433 + Ac3H11_205 0.66 +1.6 16,433 + Ac3H11_205 0.66 +0.3 16,433 + Ac3H11_205 0.66 -0.4 16,434 - Ac3H11_205 0.67 -0.5 16,434 - Ac3H11_205 0.67 -0.8 16,434 - Ac3H11_205 0.67 +0.3 16,434 - Ac3H11_205 0.67 +0.0 16,434 - Ac3H11_205 0.67 +1.8 16,434 - Ac3H11_205 0.67 -0.5 16,763 + +2.1 16,763 + -1.1 16,763 + -1.5 16,763 + -0.8 16,763 + -0.8 16,763 + +3.2 16,763 + -0.6 16,764 - -0.3 16,764 - +0.1 16,764 - -1.6 16,989 + Ac3H11_206 0.15 -0.6 16,990 - Ac3H11_206 0.15 -0.7 16,990 - Ac3H11_206 0.15 -3.2 16,990 - Ac3H11_206 0.15 -1.8 16,990 - Ac3H11_206 0.15 +0.1 17,171 + Ac3H11_206 0.23 -1.3 17,171 + Ac3H11_206 0.23 +0.6 17,172 - Ac3H11_206 0.23 +1.4 17,222 + Ac3H11_206 0.25 -2.8 17,320 + Ac3H11_206 0.29 +0.0 17,320 + Ac3H11_206 0.29 -1.1 17,320 + Ac3H11_206 0.29 -0.6 17,320 + Ac3H11_206 0.29 +0.8 17,321 - Ac3H11_206 0.29 +0.4 17,345 + Ac3H11_206 0.30 -2.1 17,346 - Ac3H11_206 0.30 -1.8 17,621 + Ac3H11_206 0.41 +2.4 17,621 + Ac3H11_206 0.41 -0.8 17,621 + Ac3H11_206 0.41 -0.7 17,622 - Ac3H11_206 0.41 -0.6 17,622 - Ac3H11_206 0.41 -0.1 17,622 - Ac3H11_206 0.41 +1.0 17,622 - Ac3H11_206 0.41 -0.5 17,622 - Ac3H11_206 0.41 -2.5 17,622 - Ac3H11_206 0.41 -0.6 17,718 + Ac3H11_206 0.45 +0.4 17,718 + Ac3H11_206 0.45 -0.9 17,961 - Ac3H11_206 0.56 -2.9 18,023 + Ac3H11_206 0.58 -0.6 18,023 + Ac3H11_206 0.58 -0.4 18,023 + Ac3H11_206 0.58 -0.7 18,023 + Ac3H11_206 0.58 -1.0 18,023 + Ac3H11_206 0.58 -0.2 18,023 + Ac3H11_206 0.58 -1.9 18,024 - Ac3H11_206 0.58 -0.1 18,024 - Ac3H11_206 0.58 -0.3 18,024 - Ac3H11_206 0.58 -0.7 18,024 - Ac3H11_206 0.58 +0.9 18,024 - Ac3H11_206 0.58 +0.2 18,024 - Ac3H11_206 0.58 -0.2 18,077 + Ac3H11_206 0.60 -2.7 18,078 - Ac3H11_206 0.60 -1.2 18,078 - Ac3H11_206 0.60 -1.6 18,299 + Ac3H11_206 0.70 +0.2 18,299 + Ac3H11_206 0.70 -1.5 18,299 + Ac3H11_206 0.70 -1.1 18,299 + Ac3H11_206 0.70 -1.2 18,299 + Ac3H11_206 0.70 -0.3 18,299 + Ac3H11_206 0.70 -0.3 18,299 + Ac3H11_206 0.70 -0.6 18,299 + Ac3H11_206 0.70 -0.6 18,299 + Ac3H11_206 0.70 +0.6 18,299 + Ac3H11_206 0.70 +0.1 18,299 + Ac3H11_206 0.70 -1.9 18,300 - Ac3H11_206 0.70 -0.4 18,300 - Ac3H11_206 0.70 -1.2 18,300 - Ac3H11_206 0.70 -0.4 18,300 - Ac3H11_206 0.70 -0.2 18,300 - Ac3H11_206 0.70 -2.7 18,300 - Ac3H11_206 0.70 +0.4 18,300 - Ac3H11_206 0.70 +0.5 18,300 - Ac3H11_206 0.70 +0.2 18,350 + Ac3H11_206 0.72 -0.5 18,521 + Ac3H11_206 0.79 -0.3 18,521 + Ac3H11_206 0.79 -1.6 18,522 - Ac3H11_206 0.79 -0.8 18,522 - Ac3H11_206 0.79 -1.8 18,522 - Ac3H11_206 0.79 +1.9 18,840 - +0.4 18,942 + -0.1 18,943 - +0.6 18,989 - -0.6 19,122 + -0.2 19,122 + +0.2 19,123 - +0.9 19,123 - +0.7 19,123 - -0.3 19,153 + -0.6 19,153 + -2.0 19,154 - -0.6 19,154 - -0.1 19,154 - -2.1 19,154 - +0.8 19,168 + -1.4 19,169 - +0.0 19,169 - +0.1 19,304 + -0.4 19,304 + +0.3 19,305 - -0.3 19,651 + Ac3H11_207 0.47 +0.6 19,651 + Ac3H11_207 0.47 -0.2 19,652 - Ac3H11_207 0.47 -1.0 19,780 + Ac3H11_207 0.62 -0.1 19,781 - Ac3H11_207 0.62 -1.2 19,781 - Ac3H11_207 0.62 -1.1 19,781 - Ac3H11_207 0.62 -0.7 19,816 + Ac3H11_207 0.66 -1.4 19,816 + Ac3H11_207 0.66 +1.5 19,816 + Ac3H11_207 0.66 -0.8 19,816 + Ac3H11_207 0.66 -1.1 19,817 - Ac3H11_207 0.66 -0.1 19,954 + Ac3H11_207 0.82 -1.1
Or see this region's nucleotide sequence