Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_1770

Experiment: Phosphomycin 0.02 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_1769 and Ac3H11_1770 are separated by 32 nucleotidesAc3H11_1770 and Ac3H11_1771 are separated by 166 nucleotides Ac3H11_1769 - Seryl-tRNA synthetase (EC 6.1.1.11), at 383,862 to 385,223 _1769 Ac3H11_1770 - Threonine dehydratase (EC 4.3.1.19), at 385,256 to 386,197 _1770 Ac3H11_1771 - tRNA nucleotidyltransferase, A-adding (EC 2.7.7.25), at 386,364 to 387,077 _1771 Position (kb) 385 386 387Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 385.235 kb on - strandat 385.329 kb on + strandat 385.329 kb on + strandat 385.329 kb on + strandat 385.330 kb on - strandat 385.756 kb on - strand, within Ac3H11_1770at 385.821 kb on + strand, within Ac3H11_1770at 385.821 kb on + strand, within Ac3H11_1770at 385.822 kb on - strand, within Ac3H11_1770at 386.016 kb on + strand, within Ac3H11_1770at 386.243 kb on - strandat 386.243 kb on - strandat 386.243 kb on - strandat 386.243 kb on - strandat 386.243 kb on - strandat 386.996 kb on + strand, within Ac3H11_1771at 387.128 kb on + strandat 387.129 kb on - strandat 387.165 kb on + strandat 387.165 kb on + strandat 387.166 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Phosphomycin 0.02 mg/ml
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385,235 - +1.2
385,329 + -2.0
385,329 + +0.1
385,329 + +0.6
385,330 - +0.4
385,756 - Ac3H11_1770 0.53 +2.9
385,821 + Ac3H11_1770 0.60 -0.5
385,821 + Ac3H11_1770 0.60 +0.6
385,822 - Ac3H11_1770 0.60 -3.3
386,016 + Ac3H11_1770 0.81 -1.3
386,243 - -1.3
386,243 - +0.5
386,243 - +0.8
386,243 - +0.0
386,243 - +1.0
386,996 + Ac3H11_1771 0.89 +0.9
387,128 + +1.2
387,129 - +1.3
387,165 + +0.7
387,165 + +1.5
387,166 - +1.2

Or see this region's nucleotide sequence