Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_12705 and AO353_12710 are separated by 190 nucleotides AO353_12710 and AO353_12715 are separated by 312 nucleotides AO353_12715 and AO353_12720 are separated by 236 nucleotides
AO353_12705: AO353_12705 - cobalamin biosynthesis protein CobQ, at 2,794,776 to 2,795,546
_12705
AO353_12710: AO353_12710 - thioredoxin, at 2,795,737 to 2,796,171
_12710
AO353_12715: AO353_12715 - hypothetical protein, at 2,796,484 to 2,796,810
_12715
AO353_12720: AO353_12720 - hypothetical protein, at 2,797,047 to 2,797,337
_12720
Position (kb)
2795
2796
2797 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2794.739 kb on + strand at 2794.739 kb on + strand at 2794.739 kb on + strand at 2794.739 kb on + strand at 2794.739 kb on + strand at 2794.739 kb on + strand at 2794.739 kb on + strand at 2794.739 kb on + strand at 2794.739 kb on + strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.740 kb on - strand at 2794.759 kb on + strand at 2794.760 kb on - strand at 2794.823 kb on + strand at 2794.911 kb on + strand, within AO353_12705 at 2794.911 kb on + strand, within AO353_12705 at 2794.912 kb on - strand, within AO353_12705 at 2794.912 kb on - strand, within AO353_12705 at 2795.012 kb on + strand, within AO353_12705 at 2795.013 kb on - strand, within AO353_12705 at 2795.016 kb on + strand, within AO353_12705 at 2795.016 kb on + strand, within AO353_12705 at 2795.016 kb on + strand, within AO353_12705 at 2795.016 kb on + strand, within AO353_12705 at 2795.016 kb on + strand, within AO353_12705 at 2795.017 kb on - strand, within AO353_12705 at 2795.017 kb on - strand, within AO353_12705 at 2795.017 kb on - strand, within AO353_12705 at 2795.145 kb on + strand, within AO353_12705 at 2795.145 kb on + strand, within AO353_12705 at 2795.146 kb on - strand, within AO353_12705 at 2795.187 kb on + strand, within AO353_12705 at 2795.187 kb on + strand, within AO353_12705 at 2795.266 kb on - strand, within AO353_12705 at 2795.421 kb on + strand, within AO353_12705 at 2795.421 kb on + strand, within AO353_12705 at 2795.421 kb on + strand, within AO353_12705 at 2795.421 kb on + strand, within AO353_12705 at 2795.422 kb on - strand, within AO353_12705 at 2795.422 kb on - strand, within AO353_12705 at 2795.422 kb on - strand, within AO353_12705 at 2795.638 kb on + strand at 2795.638 kb on + strand at 2795.638 kb on + strand at 2795.639 kb on - strand at 2795.639 kb on - strand at 2795.639 kb on - strand at 2795.639 kb on - strand at 2795.639 kb on - strand at 2795.641 kb on + strand at 2795.641 kb on + strand at 2795.641 kb on + strand at 2795.642 kb on - strand at 2795.642 kb on - strand at 2795.642 kb on - strand at 2795.642 kb on - strand at 2795.642 kb on - strand at 2795.642 kb on - strand at 2795.642 kb on - strand at 2795.642 kb on - strand at 2795.642 kb on - strand at 2795.642 kb on - strand at 2795.642 kb on - strand at 2795.725 kb on + strand at 2795.725 kb on + strand at 2795.725 kb on + strand at 2795.725 kb on + strand at 2795.726 kb on - strand at 2795.726 kb on - strand at 2795.726 kb on - strand at 2795.751 kb on + strand at 2795.751 kb on + strand at 2795.752 kb on - strand at 2795.752 kb on - strand at 2796.026 kb on + strand, within AO353_12710 at 2796.226 kb on + strand at 2796.242 kb on + strand at 2796.243 kb on - strand at 2796.243 kb on - strand at 2796.288 kb on + strand at 2796.288 kb on + strand at 2796.288 kb on + strand at 2796.288 kb on + strand at 2796.288 kb on + strand at 2796.288 kb on + strand at 2796.289 kb on - strand at 2796.289 kb on - strand at 2796.289 kb on - strand at 2796.289 kb on - strand at 2796.289 kb on - strand at 2796.289 kb on - strand at 2796.430 kb on + strand at 2796.430 kb on + strand at 2796.430 kb on + strand at 2796.430 kb on + strand at 2796.430 kb on + strand at 2796.431 kb on - strand at 2796.431 kb on - strand at 2796.431 kb on - strand at 2796.431 kb on - strand at 2796.431 kb on - strand at 2796.431 kb on - strand at 2796.431 kb on - strand at 2796.431 kb on - strand at 2796.431 kb on - strand at 2796.431 kb on - strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.434 kb on + strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.435 kb on - strand at 2796.438 kb on + strand at 2796.439 kb on - strand at 2796.439 kb on - strand at 2796.439 kb on - strand at 2796.439 kb on - strand at 2796.439 kb on - strand at 2796.468 kb on - strand at 2796.828 kb on + strand at 2796.828 kb on + strand at 2796.829 kb on - strand at 2796.829 kb on - strand at 2796.829 kb on - strand at 2796.829 kb on - strand at 2796.862 kb on + strand at 2796.862 kb on + strand at 2796.862 kb on + strand at 2796.862 kb on + strand at 2796.862 kb on + strand at 2796.863 kb on - strand at 2796.916 kb on - strand at 2796.916 kb on - strand at 2796.976 kb on + strand at 2797.086 kb on - strand, within AO353_12720 at 2797.121 kb on - strand, within AO353_12720 at 2797.165 kb on + strand, within AO353_12720 at 2797.165 kb on + strand, within AO353_12720 at 2797.165 kb on + strand, within AO353_12720 at 2797.166 kb on - strand, within AO353_12720 at 2797.166 kb on - strand, within AO353_12720 at 2797.166 kb on - strand, within AO353_12720
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 2,794,739 + +0.3 2,794,739 + -0.9 2,794,739 + +2.1 2,794,739 + +0.7 2,794,739 + -0.4 2,794,739 + +0.0 2,794,739 + -0.7 2,794,739 + -0.4 2,794,739 + -0.1 2,794,740 - +0.3 2,794,740 - -0.1 2,794,740 - -0.4 2,794,740 - -0.7 2,794,740 - +0.9 2,794,740 - +0.8 2,794,740 - -0.4 2,794,740 - +1.0 2,794,740 - +0.3 2,794,740 - +0.6 2,794,740 - -0.4 2,794,740 - +0.1 2,794,759 + +0.4 2,794,760 - +0.9 2,794,823 + +1.1 2,794,911 + AO353_12705 0.18 +0.3 2,794,911 + AO353_12705 0.18 +1.1 2,794,912 - AO353_12705 0.18 -0.1 2,794,912 - AO353_12705 0.18 +0.3 2,795,012 + AO353_12705 0.31 +1.1 2,795,013 - AO353_12705 0.31 +0.1 2,795,016 + AO353_12705 0.31 -0.1 2,795,016 + AO353_12705 0.31 -0.3 2,795,016 + AO353_12705 0.31 +0.3 2,795,016 + AO353_12705 0.31 +0.1 2,795,016 + AO353_12705 0.31 +1.1 2,795,017 - AO353_12705 0.31 +0.1 2,795,017 - AO353_12705 0.31 +0.3 2,795,017 - AO353_12705 0.31 -0.2 2,795,145 + AO353_12705 0.48 -0.7 2,795,145 + AO353_12705 0.48 -0.6 2,795,146 - AO353_12705 0.48 +0.3 2,795,187 + AO353_12705 0.53 -0.2 2,795,187 + AO353_12705 0.53 -1.3 2,795,266 - AO353_12705 0.64 -1.7 2,795,421 + AO353_12705 0.84 -0.5 2,795,421 + AO353_12705 0.84 +0.3 2,795,421 + AO353_12705 0.84 +0.1 2,795,421 + AO353_12705 0.84 -0.5 2,795,422 - AO353_12705 0.84 -1.1 2,795,422 - AO353_12705 0.84 -0.2 2,795,422 - AO353_12705 0.84 -0.1 2,795,638 + +0.1 2,795,638 + -0.2 2,795,638 + -0.6 2,795,639 - -0.7 2,795,639 - +0.3 2,795,639 - -1.1 2,795,639 - -1.4 2,795,639 - -0.6 2,795,641 + -1.9 2,795,641 + +0.3 2,795,641 + +0.3 2,795,642 - -0.4 2,795,642 - -1.3 2,795,642 - +1.0 2,795,642 - -0.1 2,795,642 - -0.9 2,795,642 - +0.0 2,795,642 - +0.9 2,795,642 - -0.6 2,795,642 - +1.0 2,795,642 - -1.3 2,795,642 - -1.1 2,795,725 + -1.1 2,795,725 + +0.6 2,795,725 + -0.9 2,795,725 + -1.3 2,795,726 - +0.2 2,795,726 - -1.1 2,795,726 - +0.0 2,795,751 + +1.3 2,795,751 + +0.6 2,795,752 - -0.2 2,795,752 - -1.1 2,796,026 + AO353_12710 0.66 -0.8 2,796,226 + +0.5 2,796,242 + -0.4 2,796,243 - +0.7 2,796,243 - +0.6 2,796,288 + +2.0 2,796,288 + +2.0 2,796,288 + +0.7 2,796,288 + +1.7 2,796,288 + -0.8 2,796,288 + +0.7 2,796,289 - -2.5 2,796,289 - -0.5 2,796,289 - +0.2 2,796,289 - -0.3 2,796,289 - +0.5 2,796,289 - +0.6 2,796,430 + +2.7 2,796,430 + -1.4 2,796,430 + -0.3 2,796,430 + +0.7 2,796,430 + +1.2 2,796,431 - -0.7 2,796,431 - +0.3 2,796,431 - -0.6 2,796,431 - +0.5 2,796,431 - -0.9 2,796,431 - +0.4 2,796,431 - -0.3 2,796,431 - -1.2 2,796,431 - -0.3 2,796,431 - -0.4 2,796,434 + +0.3 2,796,434 + +0.7 2,796,434 + -1.1 2,796,434 + -0.4 2,796,434 + +0.4 2,796,434 + -0.8 2,796,434 + +0.4 2,796,434 + +1.0 2,796,434 + -0.4 2,796,434 + +0.8 2,796,434 + -1.4 2,796,434 + -0.3 2,796,434 + -0.1 2,796,434 + +0.6 2,796,434 + +0.6 2,796,435 - -0.7 2,796,435 - +0.9 2,796,435 - +1.0 2,796,435 - -0.6 2,796,435 - +0.7 2,796,435 - +1.3 2,796,435 - +0.4 2,796,435 - +0.9 2,796,435 - -2.5 2,796,435 - +0.5 2,796,435 - +0.1 2,796,435 - +2.7 2,796,435 - -0.1 2,796,435 - -0.3 2,796,435 - +0.1 2,796,435 - -0.6 2,796,435 - -0.4 2,796,435 - -1.1 2,796,438 + -0.5 2,796,439 - -0.4 2,796,439 - -0.4 2,796,439 - -0.9 2,796,439 - -0.2 2,796,439 - +1.1 2,796,468 - -0.2 2,796,828 + -0.2 2,796,828 + +0.3 2,796,829 - +0.3 2,796,829 - +1.7 2,796,829 - -0.6 2,796,829 - +0.1 2,796,862 + +0.4 2,796,862 + +0.9 2,796,862 + +0.1 2,796,862 + -0.0 2,796,862 + +0.0 2,796,863 - -0.2 2,796,916 - -0.7 2,796,916 - +0.1 2,796,976 + -0.1 2,797,086 - AO353_12720 0.13 +0.6 2,797,121 - AO353_12720 0.25 -0.4 2,797,165 + AO353_12720 0.41 +1.3 2,797,165 + AO353_12720 0.41 +0.1 2,797,165 + AO353_12720 0.41 +1.5 2,797,166 - AO353_12720 0.41 -0.6 2,797,166 - AO353_12720 0.41 -0.2 2,797,166 - AO353_12720 0.41 -0.9
Or see this region's nucleotide sequence