Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_10700 and AO353_10705 are separated by 123 nucleotides AO353_10705 and AO353_10710 overlap by 1 nucleotides AO353_10710 and AO353_10715 are separated by 112 nucleotides
AO353_10700: AO353_10700 - hypothetical protein, at 2,345,453 to 2,345,884
_10700
AO353_10705: AO353_10705 - tryptophan synthase subunit alpha, at 2,346,008 to 2,346,820
_10705
AO353_10710: AO353_10710 - tryptophan synthase subunit beta, at 2,346,820 to 2,348,040
_10710
AO353_10715: AO353_10715 - LysR family transcriptional regulator, at 2,348,153 to 2,349,043
_10715
AO353_10720: AO353_10720 - hypothetical protein, at 2,349,040 to 2,349,366
_10720
Position (kb)
2346
2347
2348
2349 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2345.846 kb on + strand at 2345.846 kb on + strand at 2345.846 kb on + strand at 2345.846 kb on + strand at 2345.846 kb on + strand at 2345.846 kb on + strand at 2345.846 kb on + strand at 2345.846 kb on + strand at 2345.847 kb on - strand at 2345.847 kb on - strand at 2345.847 kb on - strand at 2345.847 kb on - strand at 2345.847 kb on - strand at 2345.847 kb on - strand at 2345.925 kb on + strand at 2345.925 kb on + strand at 2345.925 kb on + strand at 2345.925 kb on + strand at 2345.925 kb on + strand at 2345.925 kb on + strand at 2345.925 kb on + strand at 2345.925 kb on + strand at 2345.926 kb on - strand at 2345.926 kb on - strand at 2345.926 kb on - strand at 2345.926 kb on - strand at 2345.926 kb on - strand at 2345.926 kb on - strand at 2345.926 kb on - strand at 2345.926 kb on - strand at 2345.926 kb on - strand at 2345.926 kb on - strand at 2345.956 kb on + strand at 2345.956 kb on + strand at 2345.956 kb on + strand at 2345.956 kb on + strand at 2345.956 kb on + strand at 2345.956 kb on + strand at 2345.956 kb on + strand at 2345.956 kb on + strand at 2345.956 kb on + strand at 2345.956 kb on + strand at 2345.957 kb on - strand at 2345.957 kb on - strand at 2345.957 kb on - strand at 2345.957 kb on - strand at 2345.957 kb on - strand at 2345.960 kb on + strand at 2345.960 kb on + strand at 2345.960 kb on + strand at 2345.960 kb on + strand at 2345.960 kb on + strand at 2345.960 kb on + strand at 2345.960 kb on + strand at 2345.960 kb on + strand at 2345.960 kb on + strand at 2345.960 kb on + strand at 2345.960 kb on + strand at 2345.960 kb on + strand at 2345.960 kb on + strand at 2345.961 kb on - strand at 2345.961 kb on - strand at 2345.961 kb on - strand at 2345.961 kb on - strand at 2345.961 kb on - strand at 2345.961 kb on - strand at 2345.961 kb on - strand at 2345.961 kb on - strand at 2345.961 kb on - strand at 2345.961 kb on - strand at 2345.980 kb on + strand at 2345.980 kb on + strand at 2345.980 kb on + strand at 2345.980 kb on + strand at 2345.981 kb on - strand at 2345.981 kb on - strand at 2345.991 kb on + strand at 2345.992 kb on - strand at 2345.992 kb on - strand at 2346.003 kb on + strand at 2346.003 kb on + strand at 2346.003 kb on + strand at 2346.003 kb on + strand at 2346.003 kb on + strand at 2346.003 kb on + strand at 2346.003 kb on + strand at 2346.004 kb on - strand at 2346.004 kb on - strand at 2346.004 kb on - strand at 2346.004 kb on - strand at 2346.004 kb on - strand at 2346.004 kb on - strand at 2346.009 kb on + strand at 2346.009 kb on + strand at 2346.009 kb on + strand at 2346.009 kb on + strand at 2346.009 kb on + strand at 2346.009 kb on + strand at 2346.010 kb on - strand at 2346.010 kb on - strand at 2346.025 kb on + strand at 2346.025 kb on + strand at 2346.026 kb on - strand at 2346.026 kb on - strand at 2346.295 kb on - strand, within AO353_10705 at 2346.295 kb on - strand, within AO353_10705 at 2346.295 kb on - strand, within AO353_10705 at 2346.295 kb on - strand, within AO353_10705 at 2346.295 kb on - strand, within AO353_10705 at 2346.295 kb on - strand, within AO353_10705 at 2346.298 kb on - strand, within AO353_10705 at 2346.298 kb on - strand, within AO353_10705 at 2346.416 kb on - strand, within AO353_10705 at 2346.416 kb on - strand, within AO353_10705 at 2346.499 kb on - strand, within AO353_10705 at 2346.499 kb on - strand, within AO353_10705 at 2346.733 kb on - strand, within AO353_10705 at 2346.733 kb on - strand, within AO353_10705 at 2346.733 kb on - strand, within AO353_10705 at 2346.733 kb on - strand, within AO353_10705 at 2346.733 kb on - strand, within AO353_10705 at 2346.733 kb on - strand, within AO353_10705 at 2346.733 kb on - strand, within AO353_10705 at 2346.850 kb on - strand at 2346.850 kb on - strand at 2346.850 kb on - strand at 2346.982 kb on - strand, within AO353_10710 at 2346.982 kb on - strand, within AO353_10710 at 2347.047 kb on - strand, within AO353_10710 at 2347.047 kb on - strand, within AO353_10710 at 2347.047 kb on - strand, within AO353_10710 at 2347.047 kb on - strand, within AO353_10710 at 2347.047 kb on - strand, within AO353_10710 at 2347.193 kb on - strand, within AO353_10710 at 2347.461 kb on - strand, within AO353_10710 at 2347.461 kb on - strand, within AO353_10710 at 2347.461 kb on - strand, within AO353_10710 at 2347.461 kb on - strand, within AO353_10710 at 2347.461 kb on - strand, within AO353_10710 at 2347.620 kb on - strand, within AO353_10710 at 2347.620 kb on - strand, within AO353_10710 at 2347.620 kb on - strand, within AO353_10710 at 2347.620 kb on - strand, within AO353_10710 at 2347.620 kb on - strand, within AO353_10710 at 2347.797 kb on - strand, within AO353_10710 at 2347.797 kb on - strand, within AO353_10710 at 2347.797 kb on - strand, within AO353_10710 at 2347.797 kb on - strand, within AO353_10710 at 2347.842 kb on - strand, within AO353_10710 at 2347.842 kb on - strand, within AO353_10710 at 2347.866 kb on - strand, within AO353_10710 at 2347.866 kb on - strand, within AO353_10710 at 2347.926 kb on - strand at 2347.926 kb on - strand at 2348.029 kb on - strand at 2348.029 kb on - strand at 2348.029 kb on - strand at 2348.029 kb on - strand at 2348.085 kb on + strand at 2348.150 kb on - strand at 2348.280 kb on + strand, within AO353_10715 at 2348.281 kb on - strand, within AO353_10715 at 2348.358 kb on + strand, within AO353_10715 at 2348.627 kb on + strand, within AO353_10715 at 2348.627 kb on + strand, within AO353_10715 at 2348.627 kb on + strand, within AO353_10715 at 2348.628 kb on - strand, within AO353_10715 at 2348.628 kb on - strand, within AO353_10715 at 2348.628 kb on - strand, within AO353_10715 at 2348.831 kb on + strand, within AO353_10715 at 2348.831 kb on + strand, within AO353_10715 at 2348.831 kb on + strand, within AO353_10715 at 2348.832 kb on - strand, within AO353_10715 at 2348.832 kb on - strand, within AO353_10715 at 2348.832 kb on - strand, within AO353_10715 at 2348.832 kb on - strand, within AO353_10715 at 2348.832 kb on - strand, within AO353_10715 at 2348.832 kb on - strand, within AO353_10715 at 2348.832 kb on - strand, within AO353_10715 at 2348.832 kb on - strand, within AO353_10715 at 2348.834 kb on + strand, within AO353_10715 at 2348.834 kb on + strand, within AO353_10715 at 2348.835 kb on - strand, within AO353_10715 at 2348.835 kb on - strand, within AO353_10715 at 2348.835 kb on - strand, within AO353_10715 at 2348.835 kb on - strand, within AO353_10715 at 2348.835 kb on - strand, within AO353_10715 at 2348.835 kb on - strand, within AO353_10715
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 2,345,846 + +1.1 2,345,846 + +1.1 2,345,846 + +0.5 2,345,846 + +1.5 2,345,846 + -1.1 2,345,846 + -0.0 2,345,846 + +0.3 2,345,846 + +1.5 2,345,847 - +0.2 2,345,847 - -0.1 2,345,847 - +0.7 2,345,847 - +0.8 2,345,847 - +0.3 2,345,847 - +3.5 2,345,925 + +0.1 2,345,925 + -0.4 2,345,925 + +0.3 2,345,925 + -0.1 2,345,925 + +0.2 2,345,925 + +1.1 2,345,925 + -0.8 2,345,925 + +0.4 2,345,926 - -0.2 2,345,926 - -0.6 2,345,926 - -0.9 2,345,926 - -0.0 2,345,926 - -0.9 2,345,926 - -0.8 2,345,926 - -0.1 2,345,926 - -1.0 2,345,926 - -1.1 2,345,926 - +0.1 2,345,956 + +0.4 2,345,956 + -0.1 2,345,956 + -0.6 2,345,956 + -0.7 2,345,956 + -1.4 2,345,956 + -0.5 2,345,956 + -2.0 2,345,956 + +0.0 2,345,956 + +0.6 2,345,956 + -0.5 2,345,957 - -0.6 2,345,957 - -1.1 2,345,957 - -1.1 2,345,957 - +0.2 2,345,957 - -0.6 2,345,960 + +0.2 2,345,960 + -0.2 2,345,960 + -0.1 2,345,960 + -1.6 2,345,960 + -0.9 2,345,960 + -0.4 2,345,960 + -2.3 2,345,960 + +0.3 2,345,960 + -0.9 2,345,960 + +2.3 2,345,960 + -1.0 2,345,960 + +0.3 2,345,960 + -0.3 2,345,961 - -0.9 2,345,961 - +0.1 2,345,961 - -0.2 2,345,961 - -0.6 2,345,961 - -2.0 2,345,961 - -1.0 2,345,961 - -0.3 2,345,961 - -0.7 2,345,961 - +0.1 2,345,961 - -1.9 2,345,980 + -0.1 2,345,980 + -0.4 2,345,980 + -1.0 2,345,980 + -0.3 2,345,981 - +1.9 2,345,981 - -0.7 2,345,991 + -1.1 2,345,992 - -1.3 2,345,992 - -1.3 2,346,003 + -0.0 2,346,003 + -0.7 2,346,003 + -0.5 2,346,003 + -1.0 2,346,003 + -0.8 2,346,003 + +0.1 2,346,003 + -1.3 2,346,004 - -2.6 2,346,004 - +0.0 2,346,004 - -2.0 2,346,004 - +1.8 2,346,004 - -0.7 2,346,004 - +0.2 2,346,009 + -1.6 2,346,009 + +1.9 2,346,009 + -0.7 2,346,009 + -0.7 2,346,009 + -1.6 2,346,009 + -0.1 2,346,010 - +1.9 2,346,010 - -1.7 2,346,025 + +0.0 2,346,025 + -2.1 2,346,026 - +0.4 2,346,026 - -2.1 2,346,295 - AO353_10705 0.35 -0.7 2,346,295 - AO353_10705 0.35 -1.6 2,346,295 - AO353_10705 0.35 -0.4 2,346,295 - AO353_10705 0.35 -2.3 2,346,295 - AO353_10705 0.35 -0.0 2,346,295 - AO353_10705 0.35 -1.6 2,346,298 - AO353_10705 0.36 -0.7 2,346,298 - AO353_10705 0.36 -1.1 2,346,416 - AO353_10705 0.50 -2.3 2,346,416 - AO353_10705 0.50 -0.9 2,346,499 - AO353_10705 0.60 +0.1 2,346,499 - AO353_10705 0.60 +1.9 2,346,733 - AO353_10705 0.89 -0.4 2,346,733 - AO353_10705 0.89 -1.1 2,346,733 - AO353_10705 0.89 -1.1 2,346,733 - AO353_10705 0.89 -2.6 2,346,733 - AO353_10705 0.89 -2.7 2,346,733 - AO353_10705 0.89 -1.8 2,346,733 - AO353_10705 0.89 +0.8 2,346,850 - -0.4 2,346,850 - -1.9 2,346,850 - -1.8 2,346,982 - AO353_10710 0.13 -0.4 2,346,982 - AO353_10710 0.13 -0.9 2,347,047 - AO353_10710 0.19 -0.7 2,347,047 - AO353_10710 0.19 -2.3 2,347,047 - AO353_10710 0.19 -2.3 2,347,047 - AO353_10710 0.19 -0.4 2,347,047 - AO353_10710 0.19 -2.7 2,347,193 - AO353_10710 0.31 -1.3 2,347,461 - AO353_10710 0.52 -1.1 2,347,461 - AO353_10710 0.52 -1.4 2,347,461 - AO353_10710 0.52 -0.1 2,347,461 - AO353_10710 0.52 -0.7 2,347,461 - AO353_10710 0.52 -1.8 2,347,620 - AO353_10710 0.66 -1.3 2,347,620 - AO353_10710 0.66 -1.6 2,347,620 - AO353_10710 0.66 -0.7 2,347,620 - AO353_10710 0.66 -1.6 2,347,620 - AO353_10710 0.66 -0.9 2,347,797 - AO353_10710 0.80 -1.4 2,347,797 - AO353_10710 0.80 -3.6 2,347,797 - AO353_10710 0.80 -0.7 2,347,797 - AO353_10710 0.80 -3.4 2,347,842 - AO353_10710 0.84 +2.7 2,347,842 - AO353_10710 0.84 +0.4 2,347,866 - AO353_10710 0.86 +0.3 2,347,866 - AO353_10710 0.86 -1.3 2,347,926 - -1.4 2,347,926 - -1.3 2,348,029 - -2.3 2,348,029 - -0.9 2,348,029 - -2.3 2,348,029 - -0.7 2,348,085 + -3.1 2,348,150 - +0.6 2,348,280 + AO353_10715 0.14 -1.3 2,348,281 - AO353_10715 0.14 +0.2 2,348,358 + AO353_10715 0.23 +0.7 2,348,627 + AO353_10715 0.53 +0.3 2,348,627 + AO353_10715 0.53 +0.4 2,348,627 + AO353_10715 0.53 -1.1 2,348,628 - AO353_10715 0.53 +0.7 2,348,628 - AO353_10715 0.53 -0.7 2,348,628 - AO353_10715 0.53 -0.8 2,348,831 + AO353_10715 0.76 +0.6 2,348,831 + AO353_10715 0.76 -0.9 2,348,831 + AO353_10715 0.76 -1.3 2,348,832 - AO353_10715 0.76 -0.7 2,348,832 - AO353_10715 0.76 -0.0 2,348,832 - AO353_10715 0.76 -0.4 2,348,832 - AO353_10715 0.76 -0.3 2,348,832 - AO353_10715 0.76 -1.1 2,348,832 - AO353_10715 0.76 -1.6 2,348,832 - AO353_10715 0.76 -2.3 2,348,832 - AO353_10715 0.76 -0.8 2,348,834 + AO353_10715 0.76 -0.1 2,348,834 + AO353_10715 0.76 -0.6 2,348,835 - AO353_10715 0.77 +0.7 2,348,835 - AO353_10715 0.77 -1.1 2,348,835 - AO353_10715 0.77 -3.2 2,348,835 - AO353_10715 0.77 -0.7 2,348,835 - AO353_10715 0.77 +0.2 2,348,835 - AO353_10715 0.77 -0.2
Or see this region's nucleotide sequence