Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_03365

Experiment: L-Glutamic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_03360 and AO353_03365 are separated by 197 nucleotidesAO353_03365 and AO353_03370 are separated by 72 nucleotides AO353_03360: AO353_03360 - glucose-6-phosphate dehydrogenase, at 714,403 to 715,872 _03360 AO353_03365: AO353_03365 - transcriptional regulator, at 716,070 to 716,939 _03365 AO353_03370: AO353_03370 - aldose epimerase, at 717,012 to 717,866 _03370 Position (kb) 716 717Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 715.206 kb on - strand, within AO353_03360at 715.266 kb on - strand, within AO353_03360at 715.266 kb on - strand, within AO353_03360at 715.347 kb on - strand, within AO353_03360at 715.347 kb on - strand, within AO353_03360at 715.362 kb on - strand, within AO353_03360at 715.362 kb on - strand, within AO353_03360at 715.362 kb on - strand, within AO353_03360at 715.362 kb on - strand, within AO353_03360at 715.362 kb on - strand, within AO353_03360at 715.362 kb on - strand, within AO353_03360at 715.362 kb on - strand, within AO353_03360at 715.362 kb on - strand, within AO353_03360at 715.383 kb on - strand, within AO353_03360at 715.506 kb on - strand, within AO353_03360at 715.530 kb on - strand, within AO353_03360at 715.530 kb on - strand, within AO353_03360at 715.530 kb on - strand, within AO353_03360at 715.578 kb on - strand, within AO353_03360at 715.578 kb on - strand, within AO353_03360at 715.611 kb on - strand, within AO353_03360at 715.611 kb on - strand, within AO353_03360at 715.611 kb on - strand, within AO353_03360at 715.671 kb on - strand, within AO353_03360at 715.671 kb on - strand, within AO353_03360at 715.671 kb on - strand, within AO353_03360at 715.693 kb on - strand, within AO353_03360at 715.693 kb on - strand, within AO353_03360at 715.693 kb on - strand, within AO353_03360at 715.693 kb on - strand, within AO353_03360at 715.785 kb on - strandat 715.785 kb on - strandat 715.785 kb on - strandat 715.968 kb on + strandat 715.969 kb on - strandat 715.969 kb on - strandat 715.970 kb on + strandat 716.004 kb on + strandat 716.009 kb on + strandat 716.010 kb on - strandat 716.050 kb on - strandat 716.058 kb on + strandat 716.058 kb on + strandat 716.067 kb on + strandat 716.067 kb on + strandat 716.067 kb on + strandat 716.067 kb on + strandat 716.067 kb on + strandat 716.067 kb on + strandat 716.067 kb on + strandat 716.067 kb on + strandat 716.067 kb on + strandat 716.067 kb on + strandat 716.067 kb on + strandat 716.067 kb on + strandat 716.067 kb on + strandat 716.067 kb on + strandat 716.068 kb on - strandat 716.068 kb on - strandat 716.068 kb on - strandat 716.068 kb on - strandat 716.068 kb on - strandat 716.068 kb on - strandat 716.189 kb on + strand, within AO353_03365at 716.190 kb on - strand, within AO353_03365at 716.319 kb on + strand, within AO353_03365at 716.319 kb on + strand, within AO353_03365at 716.320 kb on - strand, within AO353_03365at 716.320 kb on - strand, within AO353_03365at 716.320 kb on - strand, within AO353_03365at 716.320 kb on - strand, within AO353_03365at 716.320 kb on - strand, within AO353_03365at 716.320 kb on - strand, within AO353_03365at 716.320 kb on - strand, within AO353_03365at 716.361 kb on + strand, within AO353_03365at 716.361 kb on + strand, within AO353_03365at 716.361 kb on + strand, within AO353_03365at 716.362 kb on - strand, within AO353_03365at 716.362 kb on - strand, within AO353_03365at 716.362 kb on - strand, within AO353_03365at 716.362 kb on - strand, within AO353_03365at 716.362 kb on - strand, within AO353_03365at 716.362 kb on - strand, within AO353_03365at 716.362 kb on - strand, within AO353_03365at 716.631 kb on + strand, within AO353_03365at 716.632 kb on - strand, within AO353_03365at 716.781 kb on + strand, within AO353_03365at 716.781 kb on + strand, within AO353_03365at 716.781 kb on + strand, within AO353_03365at 716.781 kb on + strand, within AO353_03365at 716.781 kb on + strand, within AO353_03365at 716.781 kb on + strand, within AO353_03365at 716.781 kb on + strand, within AO353_03365at 716.781 kb on + strand, within AO353_03365at 716.781 kb on + strand, within AO353_03365at 716.781 kb on + strand, within AO353_03365at 716.781 kb on + strand, within AO353_03365at 716.781 kb on + strand, within AO353_03365at 716.781 kb on + strand, within AO353_03365at 716.781 kb on + strand, within AO353_03365at 716.781 kb on + strand, within AO353_03365at 716.781 kb on + strand, within AO353_03365at 716.781 kb on + strand, within AO353_03365at 716.782 kb on - strand, within AO353_03365at 716.782 kb on - strand, within AO353_03365at 716.782 kb on - strandat 716.782 kb on - strand, within AO353_03365at 716.782 kb on - strand, within AO353_03365at 716.782 kb on - strand, within AO353_03365at 716.782 kb on - strand, within AO353_03365at 716.782 kb on - strand, within AO353_03365at 716.782 kb on - strand, within AO353_03365at 716.782 kb on - strand, within AO353_03365at 716.782 kb on - strand, within AO353_03365at 716.782 kb on - strand, within AO353_03365at 716.782 kb on - strand, within AO353_03365at 716.782 kb on - strand, within AO353_03365at 716.782 kb on - strand, within AO353_03365at 717.013 kb on + strandat 717.013 kb on + strandat 717.014 kb on - strandat 717.100 kb on - strand, within AO353_03370at 717.234 kb on + strand, within AO353_03370at 717.234 kb on + strand, within AO353_03370at 717.234 kb on + strand, within AO353_03370at 717.235 kb on - strand, within AO353_03370at 717.235 kb on - strand, within AO353_03370at 717.326 kb on - strand, within AO353_03370at 717.326 kb on - strand, within AO353_03370at 717.385 kb on + strand, within AO353_03370at 717.385 kb on + strand, within AO353_03370at 717.448 kb on - strand, within AO353_03370at 717.448 kb on - strand, within AO353_03370at 717.455 kb on + strand, within AO353_03370at 717.850 kb on - strandat 717.894 kb on + strandat 717.894 kb on + strandat 717.894 kb on + strandat 717.894 kb on + strandat 717.894 kb on + strandat 717.894 kb on + strandat 717.894 kb on + strandat 717.894 kb on + strandat 717.894 kb on + strandat 717.894 kb on + strandat 717.894 kb on + strandat 717.894 kb on + strandat 717.894 kb on + strandat 717.894 kb on + strandat 717.894 kb on + strandat 717.895 kb on - strandat 717.895 kb on - strandat 717.895 kb on - strandat 717.895 kb on - strandat 717.895 kb on - strandat 717.895 kb on - strandat 717.895 kb on - strandat 717.895 kb on - strandat 717.895 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (C)
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715,206 - AO353_03360 0.55 +0.5
715,266 - AO353_03360 0.59 +0.7
715,266 - AO353_03360 0.59 -1.5
715,347 - AO353_03360 0.64 -0.3
715,347 - AO353_03360 0.64 +0.2
715,362 - AO353_03360 0.65 +0.1
715,362 - AO353_03360 0.65 +0.2
715,362 - AO353_03360 0.65 +1.3
715,362 - AO353_03360 0.65 -0.6
715,362 - AO353_03360 0.65 -0.1
715,362 - AO353_03360 0.65 +0.5
715,362 - AO353_03360 0.65 -0.5
715,362 - AO353_03360 0.65 -0.3
715,383 - AO353_03360 0.67 +1.1
715,506 - AO353_03360 0.75 -0.2
715,530 - AO353_03360 0.77 +0.7
715,530 - AO353_03360 0.77 -0.7
715,530 - AO353_03360 0.77 -1.3
715,578 - AO353_03360 0.80 +0.8
715,578 - AO353_03360 0.80 -0.7
715,611 - AO353_03360 0.82 -0.3
715,611 - AO353_03360 0.82 -1.3
715,611 - AO353_03360 0.82 +0.2
715,671 - AO353_03360 0.86 +0.7
715,671 - AO353_03360 0.86 -0.3
715,671 - AO353_03360 0.86 -0.1
715,693 - AO353_03360 0.88 -0.3
715,693 - AO353_03360 0.88 -0.1
715,693 - AO353_03360 0.88 +0.2
715,693 - AO353_03360 0.88 -0.0
715,785 - +1.1
715,785 - -1.0
715,785 - -0.1
715,968 + -1.7
715,969 - -0.3
715,969 - -2.3
715,970 + +0.9
716,004 + +0.3
716,009 + +0.3
716,010 - -1.7
716,050 - +0.1
716,058 + +2.3
716,058 + -0.9
716,067 + -1.1
716,067 + -1.7
716,067 + +0.7
716,067 + -0.9
716,067 + +0.3
716,067 + -0.8
716,067 + +0.1
716,067 + -1.3
716,067 + +0.1
716,067 + +0.3
716,067 + +1.3
716,067 + -0.2
716,067 + +0.5
716,067 + -0.8
716,068 - +0.3
716,068 - -1.3
716,068 - +0.2
716,068 - +1.3
716,068 - +0.0
716,068 - -1.7
716,189 + AO353_03365 0.14 -0.5
716,190 - AO353_03365 0.14 +1.3
716,319 + AO353_03365 0.29 -1.3
716,319 + AO353_03365 0.29 -0.0
716,320 - AO353_03365 0.29 -1.8
716,320 - AO353_03365 0.29 -1.1
716,320 - AO353_03365 0.29 -0.1
716,320 - AO353_03365 0.29 +0.6
716,320 - AO353_03365 0.29 -2.0
716,320 - AO353_03365 0.29 +0.3
716,320 - AO353_03365 0.29 -2.3
716,361 + AO353_03365 0.33 +0.1
716,361 + AO353_03365 0.33 +0.2
716,361 + AO353_03365 0.33 -1.3
716,362 - AO353_03365 0.34 +0.0
716,362 - AO353_03365 0.34 -0.7
716,362 - AO353_03365 0.34 +0.3
716,362 - AO353_03365 0.34 -1.0
716,362 - AO353_03365 0.34 -1.3
716,362 - AO353_03365 0.34 -1.0
716,362 - AO353_03365 0.34 -0.7
716,631 + AO353_03365 0.64 -0.6
716,632 - AO353_03365 0.65 -1.5
716,781 + AO353_03365 0.82 -1.0
716,781 + AO353_03365 0.82 -1.3
716,781 + AO353_03365 0.82 -0.2
716,781 + AO353_03365 0.82 -0.4
716,781 + AO353_03365 0.82 -2.0
716,781 + AO353_03365 0.82 -1.5
716,781 + AO353_03365 0.82 -0.9
716,781 + AO353_03365 0.82 -2.4
716,781 + AO353_03365 0.82 -1.7
716,781 + AO353_03365 0.82 +0.2
716,781 + AO353_03365 0.82 -0.3
716,781 + AO353_03365 0.82 -0.6
716,781 + AO353_03365 0.82 -1.9
716,781 + AO353_03365 0.82 -3.3
716,781 + AO353_03365 0.82 -0.5
716,781 + AO353_03365 0.82 -0.6
716,781 + AO353_03365 0.82 -1.8
716,782 - AO353_03365 0.82 +0.0
716,782 - AO353_03365 0.82 -0.7
716,782 - -0.7
716,782 - AO353_03365 0.82 +0.0
716,782 - AO353_03365 0.82 -2.1
716,782 - AO353_03365 0.82 -0.7
716,782 - AO353_03365 0.82 -1.7
716,782 - AO353_03365 0.82 -0.9
716,782 - AO353_03365 0.82 -0.7
716,782 - AO353_03365 0.82 -0.5
716,782 - AO353_03365 0.82 -0.1
716,782 - AO353_03365 0.82 -1.5
716,782 - AO353_03365 0.82 -0.8
716,782 - AO353_03365 0.82 -0.5
716,782 - AO353_03365 0.82 -0.7
717,013 + -0.0
717,013 + +0.1
717,014 - -0.3
717,100 - AO353_03370 0.10 +0.7
717,234 + AO353_03370 0.26 +1.3
717,234 + AO353_03370 0.26 -0.2
717,234 + AO353_03370 0.26 +0.3
717,235 - AO353_03370 0.26 +0.4
717,235 - AO353_03370 0.26 +2.7
717,326 - AO353_03370 0.37 +0.6
717,326 - AO353_03370 0.37 -0.3
717,385 + AO353_03370 0.44 -0.0
717,385 + AO353_03370 0.44 -0.2
717,448 - AO353_03370 0.51 +0.5
717,448 - AO353_03370 0.51 +1.1
717,455 + AO353_03370 0.52 +0.1
717,850 - +0.6
717,894 + -0.1
717,894 + -1.1
717,894 + -1.1
717,894 + +1.0
717,894 + -0.7
717,894 + +0.7
717,894 + -0.1
717,894 + -0.2
717,894 + -0.5
717,894 + +1.7
717,894 + +0.7
717,894 + +0.5
717,894 + -0.6
717,894 + +0.8
717,894 + -1.2
717,895 - -0.5
717,895 - -1.5
717,895 - -1.3
717,895 - +2.1
717,895 - -1.0
717,895 - +0.6
717,895 - +0.3
717,895 - +0.2
717,895 - -1.3

Or see this region's nucleotide sequence