Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00860 and AO353_00865 are separated by 101 nucleotides AO353_00865 and AO353_00870 overlap by 42 nucleotides AO353_00870 and AO353_00875 are separated by 14 nucleotides
AO353_00860: AO353_00860 - EstX protein, at 194,043 to 195,032
_00860
AO353_00865: AO353_00865 - phosphoenolpyruvate synthase, at 195,134 to 197,509
_00865
AO353_00870: AO353_00870 - hypothetical protein, at 197,468 to 197,671
_00870
AO353_00875: AO353_00875 - transcriptional regulator, at 197,686 to 198,504
_00875
Position (kb) 195
196
197
198 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 194.371 kb on + strand, within AO353_00860 at 194.372 kb on - strand, within AO353_00860 at 194.509 kb on + strand, within AO353_00860 at 194.509 kb on + strand, within AO353_00860 at 194.510 kb on - strand, within AO353_00860 at 194.510 kb on - strand, within AO353_00860 at 194.510 kb on - strand, within AO353_00860 at 194.510 kb on - strand, within AO353_00860 at 194.569 kb on + strand, within AO353_00860 at 194.570 kb on - strand, within AO353_00860 at 194.570 kb on - strand, within AO353_00860 at 194.570 kb on - strand, within AO353_00860 at 194.689 kb on + strand, within AO353_00860 at 194.789 kb on - strand, within AO353_00860 at 194.919 kb on + strand, within AO353_00860 at 194.919 kb on + strand, within AO353_00860 at 195.032 kb on + strand at 195.077 kb on + strand at 195.271 kb on + strand at 195.271 kb on + strand at 195.272 kb on - strand at 195.272 kb on - strand at 195.272 kb on - strand at 195.279 kb on + strand at 195.279 kb on + strand at 195.279 kb on + strand at 195.279 kb on + strand at 195.279 kb on + strand at 195.280 kb on - strand at 195.280 kb on - strand at 195.280 kb on - strand at 195.295 kb on + strand at 195.295 kb on + strand at 195.296 kb on - strand at 195.681 kb on + strand, within AO353_00865 at 195.682 kb on - strand, within AO353_00865 at 195.682 kb on - strand, within AO353_00865 at 195.733 kb on - strand, within AO353_00865 at 195.760 kb on - strand, within AO353_00865 at 195.855 kb on + strand, within AO353_00865 at 195.856 kb on - strand, within AO353_00865 at 195.856 kb on - strand, within AO353_00865 at 195.876 kb on + strand, within AO353_00865 at 195.930 kb on + strand, within AO353_00865 at 195.931 kb on - strand, within AO353_00865 at 195.931 kb on - strand, within AO353_00865 at 195.931 kb on - strand, within AO353_00865 at 195.931 kb on - strand, within AO353_00865 at 196.247 kb on - strand, within AO353_00865 at 196.264 kb on + strand, within AO353_00865 at 196.265 kb on - strand, within AO353_00865 at 196.402 kb on + strand, within AO353_00865 at 196.470 kb on + strand, within AO353_00865 at 196.533 kb on + strand, within AO353_00865 at 196.533 kb on + strand, within AO353_00865 at 196.533 kb on + strand, within AO353_00865 at 196.533 kb on + strand, within AO353_00865 at 196.533 kb on + strand, within AO353_00865 at 196.534 kb on - strand, within AO353_00865 at 196.534 kb on - strand, within AO353_00865 at 196.534 kb on - strand, within AO353_00865 at 196.534 kb on - strand, within AO353_00865 at 196.534 kb on - strand, within AO353_00865 at 196.534 kb on - strand, within AO353_00865 at 196.534 kb on - strand, within AO353_00865 at 196.587 kb on + strand, within AO353_00865 at 196.587 kb on + strand, within AO353_00865 at 196.587 kb on + strand, within AO353_00865 at 196.587 kb on + strand, within AO353_00865 at 196.587 kb on + strand, within AO353_00865 at 196.587 kb on + strand, within AO353_00865 at 196.587 kb on + strand, within AO353_00865 at 196.588 kb on - strand, within AO353_00865 at 196.588 kb on - strand, within AO353_00865 at 196.588 kb on - strand, within AO353_00865 at 196.588 kb on - strand, within AO353_00865 at 196.588 kb on - strand, within AO353_00865 at 196.588 kb on - strand, within AO353_00865 at 196.719 kb on + strand, within AO353_00865 at 196.719 kb on + strand, within AO353_00865 at 196.719 kb on + strand, within AO353_00865 at 196.800 kb on + strand, within AO353_00865 at 196.801 kb on - strand, within AO353_00865 at 196.829 kb on + strand, within AO353_00865 at 196.830 kb on - strand, within AO353_00865 at 196.830 kb on - strand, within AO353_00865 at 196.830 kb on - strand, within AO353_00865 at 196.864 kb on + strand, within AO353_00865 at 196.911 kb on - strand, within AO353_00865 at 196.949 kb on + strand, within AO353_00865 at 196.949 kb on + strand, within AO353_00865 at 196.975 kb on + strand, within AO353_00865 at 196.976 kb on - strand, within AO353_00865 at 196.976 kb on - strand, within AO353_00865 at 196.976 kb on - strand, within AO353_00865 at 197.002 kb on - strand, within AO353_00865 at 197.036 kb on + strand, within AO353_00865 at 197.036 kb on + strand, within AO353_00865 at 197.037 kb on - strand, within AO353_00865 at 197.037 kb on - strand, within AO353_00865 at 197.037 kb on - strand, within AO353_00865 at 197.037 kb on - strand, within AO353_00865 at 197.037 kb on - strand, within AO353_00865 at 197.339 kb on + strand at 197.340 kb on - strand at 197.358 kb on + strand at 197.416 kb on + strand at 197.417 kb on - strand at 197.417 kb on - strand at 197.417 kb on - strand at 197.462 kb on + strand at 197.462 kb on + strand at 197.462 kb on + strand at 197.462 kb on + strand at 197.462 kb on + strand at 197.462 kb on + strand at 197.462 kb on + strand at 197.462 kb on + strand at 197.462 kb on + strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.496 kb on - strand at 197.496 kb on - strand at 197.496 kb on - strand at 197.496 kb on - strand at 197.496 kb on - strand at 197.496 kb on - strand at 197.496 kb on - strand at 197.496 kb on - strand at 197.499 kb on + strand at 197.499 kb on + strand at 197.499 kb on + strand at 197.499 kb on + strand at 197.499 kb on + strand at 197.499 kb on + strand at 197.500 kb on - strand at 197.500 kb on - strand at 197.504 kb on + strand at 197.504 kb on + strand at 197.504 kb on + strand at 197.505 kb on - strand at 197.505 kb on - strand at 197.505 kb on - strand at 197.505 kb on - strand at 197.505 kb on - strand at 197.505 kb on - strand at 197.525 kb on - strand, within AO353_00870 at 197.581 kb on + strand, within AO353_00870 at 197.582 kb on - strand, within AO353_00870 at 197.582 kb on - strand, within AO353_00870 at 197.601 kb on + strand, within AO353_00870 at 197.602 kb on - strand, within AO353_00870 at 197.602 kb on - strand, within AO353_00870 at 197.642 kb on + strand, within AO353_00870 at 197.642 kb on + strand at 197.643 kb on - strand, within AO353_00870 at 197.643 kb on - strand, within AO353_00870 at 197.643 kb on - strand, within AO353_00870 at 197.648 kb on - strand, within AO353_00870 at 197.669 kb on + strand at 197.707 kb on - strand at 197.707 kb on - strand at 197.727 kb on + strand at 197.728 kb on - strand at 197.728 kb on - strand at 197.775 kb on + strand, within AO353_00875 at 197.792 kb on + strand, within AO353_00875 at 197.793 kb on - strand, within AO353_00875 at 197.793 kb on - strand, within AO353_00875 at 197.793 kb on - strand, within AO353_00875 at 197.800 kb on + strand, within AO353_00875 at 197.800 kb on + strand, within AO353_00875 at 197.801 kb on - strand, within AO353_00875 at 197.801 kb on - strand, within AO353_00875 at 197.834 kb on + strand, within AO353_00875 at 197.834 kb on + strand, within AO353_00875 at 197.834 kb on + strand, within AO353_00875 at 197.834 kb on + strand, within AO353_00875 at 197.834 kb on + strand, within AO353_00875 at 197.834 kb on + strand, within AO353_00875 at 197.834 kb on + strand, within AO353_00875 at 197.835 kb on - strand, within AO353_00875 at 197.835 kb on - strand, within AO353_00875 at 197.835 kb on - strand, within AO353_00875 at 197.835 kb on - strand, within AO353_00875 at 197.907 kb on + strand, within AO353_00875 at 197.908 kb on - strand, within AO353_00875 at 197.908 kb on - strand, within AO353_00875 at 198.004 kb on + strand, within AO353_00875 at 198.005 kb on - strand, within AO353_00875 at 198.046 kb on + strand, within AO353_00875 at 198.046 kb on + strand, within AO353_00875 at 198.046 kb on + strand, within AO353_00875 at 198.046 kb on + strand, within AO353_00875 at 198.046 kb on + strand, within AO353_00875 at 198.046 kb on + strand, within AO353_00875 at 198.046 kb on + strand, within AO353_00875 at 198.046 kb on + strand, within AO353_00875 at 198.046 kb on + strand, within AO353_00875 at 198.046 kb on + strand, within AO353_00875 at 198.047 kb on - strand, within AO353_00875 at 198.047 kb on - strand, within AO353_00875 at 198.047 kb on - strand, within AO353_00875 at 198.047 kb on - strand, within AO353_00875 at 198.047 kb on - strand, within AO353_00875 at 198.047 kb on - strand, within AO353_00875 at 198.109 kb on + strand, within AO353_00875 at 198.110 kb on - strand, within AO353_00875 at 198.110 kb on - strand, within AO353_00875 at 198.112 kb on + strand, within AO353_00875 at 198.113 kb on - strand, within AO353_00875 at 198.175 kb on + strand, within AO353_00875 at 198.175 kb on + strand, within AO353_00875 at 198.175 kb on + strand, within AO353_00875 at 198.175 kb on + strand, within AO353_00875 at 198.176 kb on - strand, within AO353_00875 at 198.176 kb on - strand, within AO353_00875 at 198.358 kb on + strand, within AO353_00875 at 198.358 kb on + strand, within AO353_00875 at 198.359 kb on - strand, within AO353_00875 at 198.502 kb on + strand at 198.502 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 194,371 + AO353_00860 0.33 -1.2 194,372 - AO353_00860 0.33 +0.6 194,509 + AO353_00860 0.47 -1.7 194,509 + AO353_00860 0.47 +0.5 194,510 - AO353_00860 0.47 -0.5 194,510 - AO353_00860 0.47 +0.7 194,510 - AO353_00860 0.47 -0.7 194,510 - AO353_00860 0.47 -0.5 194,569 + AO353_00860 0.53 +0.5 194,570 - AO353_00860 0.53 +0.3 194,570 - AO353_00860 0.53 -0.3 194,570 - AO353_00860 0.53 +0.7 194,689 + AO353_00860 0.65 -0.5 194,789 - AO353_00860 0.75 -0.2 194,919 + AO353_00860 0.88 +0.4 194,919 + AO353_00860 0.88 +1.8 195,032 + -0.1 195,077 + -0.1 195,271 + -1.2 195,271 + -0.5 195,272 - -0.9 195,272 - -0.7 195,272 - -1.4 195,279 + -1.4 195,279 + -1.2 195,279 + +0.1 195,279 + -2.1 195,279 + -1.5 195,280 - -1.5 195,280 - -0.9 195,280 - +0.1 195,295 + -0.7 195,295 + -0.9 195,296 - -1.2 195,681 + AO353_00865 0.23 -1.2 195,682 - AO353_00865 0.23 -0.6 195,682 - AO353_00865 0.23 -0.9 195,733 - AO353_00865 0.25 -0.5 195,760 - AO353_00865 0.26 -1.7 195,855 + AO353_00865 0.30 -0.2 195,856 - AO353_00865 0.30 -1.5 195,856 - AO353_00865 0.30 +0.7 195,876 + AO353_00865 0.31 +0.1 195,930 + AO353_00865 0.34 +0.1 195,931 - AO353_00865 0.34 -0.7 195,931 - AO353_00865 0.34 -1.4 195,931 - AO353_00865 0.34 -0.9 195,931 - AO353_00865 0.34 -1.0 196,247 - AO353_00865 0.47 -1.1 196,264 + AO353_00865 0.48 -0.5 196,265 - AO353_00865 0.48 -1.2 196,402 + AO353_00865 0.53 -1.2 196,470 + AO353_00865 0.56 -0.9 196,533 + AO353_00865 0.59 -0.1 196,533 + AO353_00865 0.59 +0.1 196,533 + AO353_00865 0.59 -1.4 196,533 + AO353_00865 0.59 -1.5 196,533 + AO353_00865 0.59 +0.7 196,534 - AO353_00865 0.59 -0.2 196,534 - AO353_00865 0.59 +0.5 196,534 - AO353_00865 0.59 -1.5 196,534 - AO353_00865 0.59 -1.7 196,534 - AO353_00865 0.59 -2.6 196,534 - AO353_00865 0.59 -2.6 196,534 - AO353_00865 0.59 +1.7 196,587 + AO353_00865 0.61 +0.5 196,587 + AO353_00865 0.61 -2.2 196,587 + AO353_00865 0.61 -2.4 196,587 + AO353_00865 0.61 -3.2 196,587 + AO353_00865 0.61 -2.1 196,587 + AO353_00865 0.61 -2.5 196,587 + AO353_00865 0.61 +1.1 196,588 - AO353_00865 0.61 -0.5 196,588 - AO353_00865 0.61 -1.5 196,588 - AO353_00865 0.61 -1.2 196,588 - AO353_00865 0.61 +0.5 196,588 - AO353_00865 0.61 -1.7 196,588 - AO353_00865 0.61 -1.2 196,719 + AO353_00865 0.67 -3.1 196,719 + AO353_00865 0.67 -0.7 196,719 + AO353_00865 0.67 -1.6 196,800 + AO353_00865 0.70 -0.9 196,801 - AO353_00865 0.70 -2.0 196,829 + AO353_00865 0.71 -2.1 196,830 - AO353_00865 0.71 -0.4 196,830 - AO353_00865 0.71 -1.2 196,830 - AO353_00865 0.71 -0.7 196,864 + AO353_00865 0.73 -3.4 196,911 - AO353_00865 0.75 -2.4 196,949 + AO353_00865 0.76 -0.5 196,949 + AO353_00865 0.76 -2.4 196,975 + AO353_00865 0.77 -2.0 196,976 - AO353_00865 0.78 -1.2 196,976 - AO353_00865 0.78 -1.4 196,976 - AO353_00865 0.78 -3.1 197,002 - AO353_00865 0.79 -0.9 197,036 + AO353_00865 0.80 -1.5 197,036 + AO353_00865 0.80 -1.7 197,037 - AO353_00865 0.80 -1.1 197,037 - AO353_00865 0.80 -1.7 197,037 - AO353_00865 0.80 +0.1 197,037 - AO353_00865 0.80 -0.6 197,037 - AO353_00865 0.80 -0.7 197,339 + -1.1 197,340 - -1.9 197,358 + +0.5 197,416 + -0.4 197,417 - -0.0 197,417 - -1.0 197,417 - +0.5 197,462 + -1.5 197,462 + -1.5 197,462 + -2.2 197,462 + -2.1 197,462 + -1.9 197,462 + -0.6 197,462 + -1.2 197,462 + -1.2 197,462 + -0.5 197,463 - -1.9 197,463 - +0.1 197,463 - -0.2 197,463 - -1.5 197,463 - -0.4 197,463 - -1.5 197,463 - -1.9 197,463 - -1.0 197,463 - -1.8 197,463 - +0.1 197,463 - -1.2 197,463 - -0.6 197,495 + -0.6 197,495 + -1.4 197,495 + -1.7 197,495 + -0.9 197,495 + -1.7 197,495 + -0.8 197,495 + -1.6 197,495 + -0.9 197,495 + -1.2 197,495 + +0.3 197,495 + -0.7 197,495 + +0.1 197,496 - -1.6 197,496 - -0.8 197,496 - +0.4 197,496 - -1.4 197,496 - -2.4 197,496 - -1.2 197,496 - -1.9 197,496 - -2.9 197,499 + -2.6 197,499 + -1.5 197,499 + -1.7 197,499 + +1.1 197,499 + -0.3 197,499 + +0.8 197,500 - -0.6 197,500 - -0.3 197,504 + -1.5 197,504 + +2.1 197,504 + -1.0 197,505 - +0.5 197,505 - -1.2 197,505 - -0.9 197,505 - -0.8 197,505 - -1.2 197,505 - -1.5 197,525 - AO353_00870 0.28 -0.4 197,581 + AO353_00870 0.55 -0.5 197,582 - AO353_00870 0.56 +0.4 197,582 - AO353_00870 0.56 +0.1 197,601 + AO353_00870 0.65 -0.6 197,602 - AO353_00870 0.66 -0.7 197,602 - AO353_00870 0.66 +0.1 197,642 + AO353_00870 0.85 -0.6 197,642 + -0.5 197,643 - AO353_00870 0.86 -0.3 197,643 - AO353_00870 0.86 +0.2 197,643 - AO353_00870 0.86 +0.1 197,648 - AO353_00870 0.88 +0.7 197,669 + -1.2 197,707 - -0.3 197,707 - -0.1 197,727 + -0.5 197,728 - -0.6 197,728 - -0.5 197,775 + AO353_00875 0.11 +0.2 197,792 + AO353_00875 0.13 -0.5 197,793 - AO353_00875 0.13 +1.1 197,793 - AO353_00875 0.13 +0.7 197,793 - AO353_00875 0.13 +0.9 197,800 + AO353_00875 0.14 -1.2 197,800 + AO353_00875 0.14 -0.3 197,801 - AO353_00875 0.14 +0.7 197,801 - AO353_00875 0.14 -1.4 197,834 + AO353_00875 0.18 -1.2 197,834 + AO353_00875 0.18 -0.5 197,834 + AO353_00875 0.18 -1.2 197,834 + AO353_00875 0.18 -2.5 197,834 + AO353_00875 0.18 -0.2 197,834 + AO353_00875 0.18 -2.9 197,834 + AO353_00875 0.18 -2.1 197,835 - AO353_00875 0.18 +0.1 197,835 - AO353_00875 0.18 -0.5 197,835 - AO353_00875 0.18 -1.6 197,835 - AO353_00875 0.18 -1.8 197,907 + AO353_00875 0.27 -1.4 197,908 - AO353_00875 0.27 +0.1 197,908 - AO353_00875 0.27 -2.8 198,004 + AO353_00875 0.39 -2.2 198,005 - AO353_00875 0.39 -1.2 198,046 + AO353_00875 0.44 -0.3 198,046 + AO353_00875 0.44 -1.8 198,046 + AO353_00875 0.44 -0.5 198,046 + AO353_00875 0.44 +0.1 198,046 + AO353_00875 0.44 +0.1 198,046 + AO353_00875 0.44 -0.7 198,046 + AO353_00875 0.44 -0.8 198,046 + AO353_00875 0.44 -0.2 198,046 + AO353_00875 0.44 +1.1 198,046 + AO353_00875 0.44 -0.1 198,047 - AO353_00875 0.44 -1.0 198,047 - AO353_00875 0.44 -0.9 198,047 - AO353_00875 0.44 -0.2 198,047 - AO353_00875 0.44 -0.0 198,047 - AO353_00875 0.44 -2.2 198,047 - AO353_00875 0.44 -0.9 198,109 + AO353_00875 0.52 -0.0 198,110 - AO353_00875 0.52 -0.0 198,110 - AO353_00875 0.52 -0.3 198,112 + AO353_00875 0.52 -0.3 198,113 - AO353_00875 0.52 +0.6 198,175 + AO353_00875 0.60 -1.7 198,175 + AO353_00875 0.60 +1.7 198,175 + AO353_00875 0.60 +0.3 198,175 + AO353_00875 0.60 +0.1 198,176 - AO353_00875 0.60 -0.4 198,176 - AO353_00875 0.60 +0.6 198,358 + AO353_00875 0.82 -0.5 198,358 + AO353_00875 0.82 -3.0 198,359 - AO353_00875 0.82 -0.5 198,502 + -1.0 198,502 + -0.4
Or see this region's nucleotide sequence