Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00640 and AO353_00645 are separated by 22 nucleotides AO353_00645 and AO353_00650 overlap by 8 nucleotides AO353_00650 and AO353_00655 are separated by 257 nucleotides
AO353_00640: AO353_00640 - carbonate dehydratase, at 135,059 to 137,509
_00640
AO353_00645: AO353_00645 - cytochrome C oxidase Cbb3, at 137,532 to 137,762
_00645
AO353_00650: AO353_00650 - cytochrome biogenesis protein, at 137,755 to 138,438
_00650
AO353_00655: AO353_00655 - coproporphyrinogen III oxidase, at 138,696 to 140,078
_00655
Position (kb)
137
138
139 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 137.293 kb on + strand at 137.293 kb on + strand at 137.337 kb on - strand at 137.589 kb on + strand, within AO353_00645 at 137.908 kb on + strand, within AO353_00650 at 138.110 kb on + strand, within AO353_00650 at 138.110 kb on + strand, within AO353_00650 at 138.110 kb on + strand, within AO353_00650 at 138.110 kb on + strand, within AO353_00650 at 138.111 kb on - strand, within AO353_00650 at 138.111 kb on - strand, within AO353_00650 at 138.349 kb on - strand, within AO353_00650 at 138.436 kb on + strand at 138.436 kb on + strand at 138.436 kb on + strand at 138.436 kb on + strand at 138.437 kb on - strand at 138.437 kb on - strand at 138.437 kb on - strand at 138.437 kb on - strand at 138.456 kb on + strand at 138.456 kb on + strand at 138.456 kb on + strand at 138.457 kb on - strand at 138.457 kb on - strand at 138.462 kb on + strand at 138.462 kb on + strand at 138.462 kb on + strand at 138.463 kb on - strand at 138.503 kb on - strand at 138.544 kb on + strand at 138.545 kb on - strand at 138.545 kb on - strand at 138.557 kb on + strand at 138.557 kb on + strand at 138.557 kb on + strand at 138.557 kb on + strand at 138.557 kb on + strand at 138.557 kb on + strand at 138.558 kb on - strand at 138.558 kb on - strand at 138.558 kb on - strand at 138.558 kb on - strand at 138.558 kb on - strand at 138.558 kb on - strand at 138.558 kb on - strand at 138.558 kb on - strand at 138.558 kb on - strand at 138.558 kb on - strand at 138.558 kb on - strand at 138.588 kb on + strand at 138.588 kb on + strand at 138.589 kb on - strand at 138.589 kb on - strand at 138.589 kb on - strand at 138.759 kb on + strand at 138.760 kb on - strand at 138.804 kb on - strand at 138.864 kb on + strand, within AO353_00655 at 138.864 kb on + strand, within AO353_00655 at 138.864 kb on + strand, within AO353_00655 at 138.864 kb on + strand, within AO353_00655 at 138.864 kb on + strand, within AO353_00655 at 138.864 kb on + strand at 138.865 kb on - strand, within AO353_00655 at 138.865 kb on - strand, within AO353_00655 at 138.865 kb on - strand, within AO353_00655 at 138.897 kb on + strand, within AO353_00655 at 138.897 kb on + strand, within AO353_00655 at 138.898 kb on - strand, within AO353_00655 at 138.898 kb on - strand, within AO353_00655 at 138.900 kb on + strand, within AO353_00655 at 138.900 kb on + strand, within AO353_00655 at 138.900 kb on + strand, within AO353_00655 at 138.901 kb on - strand, within AO353_00655 at 138.901 kb on - strand, within AO353_00655 at 138.901 kb on - strand, within AO353_00655 at 138.952 kb on - strand, within AO353_00655 at 139.241 kb on - strand, within AO353_00655 at 139.341 kb on + strand, within AO353_00655 at 139.341 kb on + strand, within AO353_00655 at 139.342 kb on - strand, within AO353_00655 at 139.342 kb on - strand, within AO353_00655 at 139.342 kb on - strand, within AO353_00655 at 139.342 kb on - strand, within AO353_00655 at 139.431 kb on + strand, within AO353_00655 at 139.431 kb on + strand, within AO353_00655 at 139.431 kb on + strand, within AO353_00655 at 139.431 kb on + strand, within AO353_00655 at 139.431 kb on + strand, within AO353_00655 at 139.431 kb on + strand, within AO353_00655 at 139.431 kb on + strand, within AO353_00655 at 139.431 kb on + strand, within AO353_00655 at 139.431 kb on + strand, within AO353_00655 at 139.431 kb on + strand, within AO353_00655 at 139.431 kb on + strand, within AO353_00655 at 139.431 kb on + strand, within AO353_00655 at 139.432 kb on - strand, within AO353_00655 at 139.432 kb on - strand, within AO353_00655 at 139.432 kb on - strand, within AO353_00655 at 139.432 kb on - strand, within AO353_00655 at 139.432 kb on - strand, within AO353_00655 at 139.432 kb on - strand, within AO353_00655 at 139.432 kb on - strand, within AO353_00655 at 139.432 kb on - strand, within AO353_00655 at 139.432 kb on - strand, within AO353_00655 at 139.432 kb on - strand, within AO353_00655 at 139.432 kb on - strand, within AO353_00655 at 139.432 kb on - strand, within AO353_00655 at 139.432 kb on - strand, within AO353_00655
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 137,293 + +0.1 137,293 + +0.2 137,337 - -1.1 137,589 + AO353_00645 0.25 +1.1 137,908 + AO353_00650 0.22 -0.5 138,110 + AO353_00650 0.52 -1.2 138,110 + AO353_00650 0.52 -1.2 138,110 + AO353_00650 0.52 +1.0 138,110 + AO353_00650 0.52 -0.2 138,111 - AO353_00650 0.52 -0.2 138,111 - AO353_00650 0.52 -0.1 138,349 - AO353_00650 0.87 -1.2 138,436 + -0.5 138,436 + +0.3 138,436 + -0.1 138,436 + +1.5 138,437 - +0.6 138,437 - +0.4 138,437 - -0.7 138,437 - -0.1 138,456 + +0.1 138,456 + +1.4 138,456 + -0.9 138,457 - -0.7 138,457 - -1.2 138,462 + -1.7 138,462 + +1.7 138,462 + -0.4 138,463 - -1.8 138,503 - -0.0 138,544 + +0.3 138,545 - +0.1 138,545 - +0.8 138,557 + -1.4 138,557 + +0.1 138,557 + -2.8 138,557 + +1.1 138,557 + +1.1 138,557 + -0.7 138,558 - +0.4 138,558 - -0.1 138,558 - +0.8 138,558 - -2.7 138,558 - +1.1 138,558 - +0.5 138,558 - -0.0 138,558 - +0.2 138,558 - +0.6 138,558 - -1.0 138,558 - +0.1 138,588 + +0.7 138,588 + -0.2 138,589 - -0.2 138,589 - +0.5 138,589 - -0.3 138,759 + -1.7 138,760 - -0.2 138,804 - +0.2 138,864 + AO353_00655 0.12 -0.6 138,864 + AO353_00655 0.12 -0.3 138,864 + AO353_00655 0.12 -0.2 138,864 + AO353_00655 0.12 +0.8 138,864 + AO353_00655 0.12 -1.4 138,864 + +0.5 138,865 - AO353_00655 0.12 +0.3 138,865 - AO353_00655 0.12 +1.1 138,865 - AO353_00655 0.12 +0.7 138,897 + AO353_00655 0.15 +1.4 138,897 + AO353_00655 0.15 +0.3 138,898 - AO353_00655 0.15 -2.0 138,898 - AO353_00655 0.15 +0.8 138,900 + AO353_00655 0.15 -0.9 138,900 + AO353_00655 0.15 -1.5 138,900 + AO353_00655 0.15 +0.1 138,901 - AO353_00655 0.15 +0.6 138,901 - AO353_00655 0.15 -0.1 138,901 - AO353_00655 0.15 -0.1 138,952 - AO353_00655 0.19 -0.3 139,241 - AO353_00655 0.39 -1.1 139,341 + AO353_00655 0.47 +0.2 139,341 + AO353_00655 0.47 -0.8 139,342 - AO353_00655 0.47 -1.2 139,342 - AO353_00655 0.47 +0.3 139,342 - AO353_00655 0.47 -0.4 139,342 - AO353_00655 0.47 -0.9 139,431 + AO353_00655 0.53 -0.1 139,431 + AO353_00655 0.53 -0.1 139,431 + AO353_00655 0.53 -0.1 139,431 + AO353_00655 0.53 +0.8 139,431 + AO353_00655 0.53 -2.1 139,431 + AO353_00655 0.53 +0.8 139,431 + AO353_00655 0.53 -0.3 139,431 + AO353_00655 0.53 +0.1 139,431 + AO353_00655 0.53 -0.1 139,431 + AO353_00655 0.53 +2.1 139,431 + AO353_00655 0.53 +1.4 139,431 + AO353_00655 0.53 +0.6 139,432 - AO353_00655 0.53 +0.8 139,432 - AO353_00655 0.53 -0.9 139,432 - AO353_00655 0.53 -0.7 139,432 - AO353_00655 0.53 -1.1 139,432 - AO353_00655 0.53 +1.1 139,432 - AO353_00655 0.53 -1.2 139,432 - AO353_00655 0.53 +0.3 139,432 - AO353_00655 0.53 +0.6 139,432 - AO353_00655 0.53 +0.8 139,432 - AO353_00655 0.53 +0.5 139,432 - AO353_00655 0.53 -0.1 139,432 - AO353_00655 0.53 +0.3 139,432 - AO353_00655 0.53 +0.4
Or see this region's nucleotide sequence