Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00630 and AO353_00635 are separated by 11 nucleotides AO353_00635 and AO353_00640 are separated by 176 nucleotides
AO353_00630: AO353_00630 - (Fe-S)-binding protein, at 132,916 to 134,331
_00630
AO353_00635: AO353_00635 - hypothetical protein, at 134,343 to 134,882
_00635
AO353_00640: AO353_00640 - carbonate dehydratase, at 135,059 to 137,509
_00640
Position (kb) 134
135 Strain fitness (log2 ratio) -2
-1
0
1 at 133.514 kb on - strand, within AO353_00630 at 133.585 kb on + strand, within AO353_00630 at 133.585 kb on + strand, within AO353_00630 at 133.585 kb on + strand, within AO353_00630 at 133.585 kb on + strand, within AO353_00630 at 133.585 kb on + strand, within AO353_00630 at 133.585 kb on + strand, within AO353_00630 at 133.585 kb on + strand, within AO353_00630 at 133.585 kb on + strand, within AO353_00630 at 133.586 kb on - strand, within AO353_00630 at 133.648 kb on + strand, within AO353_00630 at 133.699 kb on + strand, within AO353_00630 at 133.873 kb on + strand, within AO353_00630 at 133.874 kb on - strand, within AO353_00630 at 134.032 kb on + strand, within AO353_00630 at 134.068 kb on + strand, within AO353_00630 at 134.068 kb on + strand, within AO353_00630 at 134.110 kb on + strand, within AO353_00630 at 134.110 kb on + strand, within AO353_00630 at 134.110 kb on + strand, within AO353_00630 at 134.110 kb on + strand, within AO353_00630 at 134.110 kb on + strand, within AO353_00630 at 134.110 kb on + strand, within AO353_00630 at 134.111 kb on - strand, within AO353_00630 at 134.373 kb on + strand at 134.373 kb on + strand at 134.374 kb on - strand at 134.487 kb on + strand, within AO353_00635 at 134.487 kb on + strand, within AO353_00635 at 134.487 kb on + strand, within AO353_00635 at 134.490 kb on + strand, within AO353_00635 at 134.599 kb on + strand, within AO353_00635 at 134.715 kb on + strand, within AO353_00635 at 134.715 kb on + strand, within AO353_00635 at 134.715 kb on + strand, within AO353_00635 at 134.715 kb on + strand, within AO353_00635 at 134.716 kb on - strand, within AO353_00635 at 134.718 kb on - strand, within AO353_00635 at 134.880 kb on + strand at 134.965 kb on + strand at 135.039 kb on + strand at 135.039 kb on + strand at 135.039 kb on + strand at 135.039 kb on + strand at 135.039 kb on + strand at 135.039 kb on + strand at 135.039 kb on + strand at 135.080 kb on + strand at 135.209 kb on + strand at 135.213 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 133,514 - AO353_00630 0.42 -1.5 133,585 + AO353_00630 0.47 -0.6 133,585 + AO353_00630 0.47 +0.1 133,585 + AO353_00630 0.47 -0.6 133,585 + AO353_00630 0.47 -0.0 133,585 + AO353_00630 0.47 -0.1 133,585 + AO353_00630 0.47 +1.1 133,585 + AO353_00630 0.47 +0.1 133,585 + AO353_00630 0.47 -0.1 133,586 - AO353_00630 0.47 -0.2 133,648 + AO353_00630 0.52 +0.7 133,699 + AO353_00630 0.55 -0.2 133,873 + AO353_00630 0.68 -0.9 133,874 - AO353_00630 0.68 +0.3 134,032 + AO353_00630 0.79 -1.4 134,068 + AO353_00630 0.81 -0.2 134,068 + AO353_00630 0.81 +1.1 134,110 + AO353_00630 0.84 -2.4 134,110 + AO353_00630 0.84 -2.2 134,110 + AO353_00630 0.84 -1.2 134,110 + AO353_00630 0.84 -0.3 134,110 + AO353_00630 0.84 -1.5 134,110 + AO353_00630 0.84 -1.1 134,111 - AO353_00630 0.84 -2.2 134,373 + +0.8 134,373 + -0.1 134,374 - +0.1 134,487 + AO353_00635 0.27 -1.1 134,487 + AO353_00635 0.27 +0.5 134,487 + AO353_00635 0.27 -0.2 134,490 + AO353_00635 0.27 +0.1 134,599 + AO353_00635 0.47 -1.4 134,715 + AO353_00635 0.69 -0.7 134,715 + AO353_00635 0.69 -1.2 134,715 + AO353_00635 0.69 +1.1 134,715 + AO353_00635 0.69 -0.5 134,716 - AO353_00635 0.69 -0.9 134,718 - AO353_00635 0.69 -1.4 134,880 + -0.2 134,965 + +0.3 135,039 + +0.7 135,039 + -0.5 135,039 + -0.3 135,039 + -1.7 135,039 + +0.4 135,039 + +0.1 135,039 + +0.1 135,080 + -0.1 135,209 + -1.9 135,213 - -0.2
Or see this region's nucleotide sequence