Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS16045 and ABZR87_RS16050 are separated by 15 nucleotides ABZR87_RS16050 and ABZR87_RS16055 are separated by 46 nucleotides ABZR87_RS16055 and ABZR87_RS16060 are separated by 120 nucleotides
ABZR87_RS16045: ABZR87_RS16045 - LysR family transcriptional regulator, at 3,392,542 to 3,393,438
_RS16045
ABZR87_RS16050: ABZR87_RS16050 - hypothetical protein, at 3,393,454 to 3,393,879
_RS16050
ABZR87_RS16055: ABZR87_RS16055 - outer membrane lipoprotein chaperone LolA, at 3,393,926 to 3,394,573
_RS16055
ABZR87_RS16060: ABZR87_RS16060 - DNA translocase FtsK, at 3,394,694 to 3,397,039
_RS16060
Position (kb)
3393
3394
3395 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3392.997 kb on + strand, within ABZR87_RS16045 at 3392.997 kb on + strand, within ABZR87_RS16045 at 3393.010 kb on + strand, within ABZR87_RS16045 at 3393.011 kb on - strand, within ABZR87_RS16045 at 3393.041 kb on - strand, within ABZR87_RS16045 at 3393.073 kb on + strand, within ABZR87_RS16045 at 3393.074 kb on - strand, within ABZR87_RS16045 at 3393.268 kb on + strand, within ABZR87_RS16045 at 3393.268 kb on + strand, within ABZR87_RS16045 at 3393.269 kb on - strand, within ABZR87_RS16045 at 3393.269 kb on - strand, within ABZR87_RS16045 at 3393.269 kb on - strand, within ABZR87_RS16045 at 3393.295 kb on + strand, within ABZR87_RS16045 at 3393.295 kb on + strand, within ABZR87_RS16045 at 3393.296 kb on - strand, within ABZR87_RS16045 at 3393.296 kb on - strand, within ABZR87_RS16045 at 3393.296 kb on - strand, within ABZR87_RS16045 at 3393.344 kb on - strand, within ABZR87_RS16045 at 3393.437 kb on - strand at 3393.896 kb on + strand at 3393.897 kb on - strand at 3393.897 kb on - strand at 3393.962 kb on - strand at 3393.962 kb on - strand at 3394.153 kb on + strand, within ABZR87_RS16055 at 3394.153 kb on + strand, within ABZR87_RS16055 at 3394.153 kb on + strand, within ABZR87_RS16055 at 3394.154 kb on - strand, within ABZR87_RS16055 at 3394.154 kb on - strand, within ABZR87_RS16055 at 3394.154 kb on - strand, within ABZR87_RS16055 at 3394.281 kb on + strand, within ABZR87_RS16055 at 3394.281 kb on + strand, within ABZR87_RS16055 at 3394.281 kb on + strand, within ABZR87_RS16055 at 3394.281 kb on + strand, within ABZR87_RS16055 at 3394.282 kb on - strand, within ABZR87_RS16055 at 3394.282 kb on - strand, within ABZR87_RS16055 at 3394.282 kb on - strand, within ABZR87_RS16055 at 3394.282 kb on - strand, within ABZR87_RS16055 at 3394.282 kb on - strand, within ABZR87_RS16055 at 3394.282 kb on - strand, within ABZR87_RS16055 at 3394.282 kb on - strand, within ABZR87_RS16055 at 3394.317 kb on + strand, within ABZR87_RS16055 at 3394.329 kb on + strand, within ABZR87_RS16055 at 3394.329 kb on + strand, within ABZR87_RS16055 at 3394.330 kb on - strand, within ABZR87_RS16055 at 3394.330 kb on - strand, within ABZR87_RS16055 at 3394.500 kb on + strand, within ABZR87_RS16055 at 3394.500 kb on + strand, within ABZR87_RS16055 at 3394.500 kb on + strand, within ABZR87_RS16055 at 3394.501 kb on - strand, within ABZR87_RS16055 at 3394.501 kb on - strand, within ABZR87_RS16055 at 3394.573 kb on + strand at 3394.573 kb on + strand at 3394.574 kb on - strand at 3394.574 kb on - strand at 3394.574 kb on - strand at 3394.604 kb on + strand at 3394.604 kb on + strand at 3394.604 kb on + strand at 3394.605 kb on - strand at 3394.652 kb on - strand at 3394.790 kb on - strand at 3394.790 kb on - strand at 3394.818 kb on + strand at 3394.819 kb on - strand at 3394.896 kb on + strand at 3395.008 kb on - strand, within ABZR87_RS16060 at 3395.008 kb on - strand, within ABZR87_RS16060 at 3395.115 kb on + strand, within ABZR87_RS16060 at 3395.115 kb on + strand, within ABZR87_RS16060 at 3395.115 kb on + strand, within ABZR87_RS16060 at 3395.529 kb on + strand, within ABZR87_RS16060 at 3395.529 kb on + strand, within ABZR87_RS16060
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 3,392,997 + ABZR87_RS16045 0.51 +1.1 3,392,997 + ABZR87_RS16045 0.51 -0.0 3,393,010 + ABZR87_RS16045 0.52 -0.1 3,393,011 - ABZR87_RS16045 0.52 -0.5 3,393,041 - ABZR87_RS16045 0.56 -0.8 3,393,073 + ABZR87_RS16045 0.59 -0.0 3,393,074 - ABZR87_RS16045 0.59 +2.1 3,393,268 + ABZR87_RS16045 0.81 +0.5 3,393,268 + ABZR87_RS16045 0.81 -0.3 3,393,269 - ABZR87_RS16045 0.81 +0.6 3,393,269 - ABZR87_RS16045 0.81 +0.1 3,393,269 - ABZR87_RS16045 0.81 -0.3 3,393,295 + ABZR87_RS16045 0.84 -0.7 3,393,295 + ABZR87_RS16045 0.84 +0.3 3,393,296 - ABZR87_RS16045 0.84 +0.5 3,393,296 - ABZR87_RS16045 0.84 +1.1 3,393,296 - ABZR87_RS16045 0.84 -0.3 3,393,344 - ABZR87_RS16045 0.89 +0.2 3,393,437 - +0.2 3,393,896 + +0.4 3,393,897 - +0.0 3,393,897 - -0.3 3,393,962 - -0.1 3,393,962 - -0.7 3,394,153 + ABZR87_RS16055 0.35 -0.2 3,394,153 + ABZR87_RS16055 0.35 -0.4 3,394,153 + ABZR87_RS16055 0.35 -1.0 3,394,154 - ABZR87_RS16055 0.35 -0.4 3,394,154 - ABZR87_RS16055 0.35 +0.1 3,394,154 - ABZR87_RS16055 0.35 -0.2 3,394,281 + ABZR87_RS16055 0.55 -0.3 3,394,281 + ABZR87_RS16055 0.55 -0.8 3,394,281 + ABZR87_RS16055 0.55 -0.1 3,394,281 + ABZR87_RS16055 0.55 -0.4 3,394,282 - ABZR87_RS16055 0.55 -1.9 3,394,282 - ABZR87_RS16055 0.55 -2.3 3,394,282 - ABZR87_RS16055 0.55 -1.5 3,394,282 - ABZR87_RS16055 0.55 -1.1 3,394,282 - ABZR87_RS16055 0.55 -1.8 3,394,282 - ABZR87_RS16055 0.55 -1.7 3,394,282 - ABZR87_RS16055 0.55 -0.3 3,394,317 + ABZR87_RS16055 0.60 -0.2 3,394,329 + ABZR87_RS16055 0.62 -0.7 3,394,329 + ABZR87_RS16055 0.62 -1.3 3,394,330 - ABZR87_RS16055 0.62 -0.3 3,394,330 - ABZR87_RS16055 0.62 -1.1 3,394,500 + ABZR87_RS16055 0.89 -0.7 3,394,500 + ABZR87_RS16055 0.89 -0.6 3,394,500 + ABZR87_RS16055 0.89 +0.4 3,394,501 - ABZR87_RS16055 0.89 +0.5 3,394,501 - ABZR87_RS16055 0.89 -0.7 3,394,573 + -0.4 3,394,573 + -0.2 3,394,574 - +0.0 3,394,574 - +0.5 3,394,574 - -0.7 3,394,604 + -1.6 3,394,604 + -0.5 3,394,604 + -0.4 3,394,605 - +0.0 3,394,652 - +0.2 3,394,790 - +0.8 3,394,790 - -0.3 3,394,818 + +0.4 3,394,819 - -0.4 3,394,896 + +0.2 3,395,008 - ABZR87_RS16060 0.13 -0.0 3,395,008 - ABZR87_RS16060 0.13 -0.9 3,395,115 + ABZR87_RS16060 0.18 +0.9 3,395,115 + ABZR87_RS16060 0.18 +1.0 3,395,115 + ABZR87_RS16060 0.18 +0.0 3,395,529 + ABZR87_RS16060 0.36 +0.5 3,395,529 + ABZR87_RS16060 0.36 -0.1
Or see this region's nucleotide sequence