Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS13630 and ABZR87_RS13635 are separated by 38 nucleotides ABZR87_RS13635 and ABZR87_RS13640 are separated by 38 nucleotides ABZR87_RS13640 and ABZR87_RS13645 are separated by 69 nucleotides ABZR87_RS13645 and ABZR87_RS13650 are separated by 132 nucleotides
ABZR87_RS13630: ABZR87_RS13630 - hypothetical protein, at 2,881,808 to 2,882,119
_RS13630
ABZR87_RS13635: ABZR87_RS13635 - hypothetical protein, at 2,882,158 to 2,882,706
_RS13635
ABZR87_RS13640: ABZR87_RS13640 - hypothetical protein, at 2,882,745 to 2,883,044
_RS13640
ABZR87_RS13645: ABZR87_RS13645 - hypothetical protein, at 2,883,114 to 2,883,269
_RS13645
ABZR87_RS13650: ABZR87_RS13650 - RHS repeat domain-containing protein, at 2,883,402 to 2,885,855
_RS13650
Position (kb)
2883
2884 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2882.130 kb on + strand at 2882.131 kb on - strand at 2882.196 kb on + strand at 2882.196 kb on + strand at 2882.197 kb on - strand at 2882.402 kb on - strand, within ABZR87_RS13635 at 2882.411 kb on + strand, within ABZR87_RS13635 at 2882.411 kb on + strand, within ABZR87_RS13635 at 2882.411 kb on + strand, within ABZR87_RS13635 at 2882.412 kb on - strand, within ABZR87_RS13635 at 2882.412 kb on - strand, within ABZR87_RS13635 at 2882.412 kb on - strand, within ABZR87_RS13635 at 2882.412 kb on - strand, within ABZR87_RS13635 at 2882.415 kb on + strand, within ABZR87_RS13635 at 2882.416 kb on - strand, within ABZR87_RS13635 at 2882.428 kb on + strand, within ABZR87_RS13635 at 2882.428 kb on + strand, within ABZR87_RS13635 at 2882.429 kb on - strand, within ABZR87_RS13635 at 2882.429 kb on - strand, within ABZR87_RS13635 at 2882.429 kb on - strand, within ABZR87_RS13635 at 2882.429 kb on - strand, within ABZR87_RS13635 at 2882.429 kb on - strand, within ABZR87_RS13635 at 2882.429 kb on - strand, within ABZR87_RS13635 at 2882.485 kb on + strand, within ABZR87_RS13635 at 2882.485 kb on + strand, within ABZR87_RS13635 at 2882.485 kb on + strand, within ABZR87_RS13635 at 2882.486 kb on - strand, within ABZR87_RS13635 at 2882.486 kb on - strand, within ABZR87_RS13635 at 2882.486 kb on - strand, within ABZR87_RS13635 at 2882.498 kb on - strand, within ABZR87_RS13635 at 2882.511 kb on + strand, within ABZR87_RS13635 at 2882.666 kb on + strand at 2882.746 kb on + strand at 2882.747 kb on - strand at 2882.747 kb on - strand at 2882.785 kb on + strand, within ABZR87_RS13640 at 2882.785 kb on + strand, within ABZR87_RS13640 at 2882.785 kb on + strand, within ABZR87_RS13640 at 2882.786 kb on - strand, within ABZR87_RS13640 at 2882.786 kb on - strand, within ABZR87_RS13640 at 2882.786 kb on - strand, within ABZR87_RS13640 at 2882.786 kb on - strand, within ABZR87_RS13640 at 2882.789 kb on + strand, within ABZR87_RS13640 at 2882.789 kb on + strand, within ABZR87_RS13640 at 2882.790 kb on - strand, within ABZR87_RS13640 at 2882.790 kb on - strand, within ABZR87_RS13640 at 2882.790 kb on - strand, within ABZR87_RS13640 at 2882.834 kb on - strand, within ABZR87_RS13640 at 2882.834 kb on - strand, within ABZR87_RS13640 at 2882.958 kb on + strand, within ABZR87_RS13640 at 2882.958 kb on + strand, within ABZR87_RS13640 at 2882.959 kb on - strand, within ABZR87_RS13640 at 2882.959 kb on - strand, within ABZR87_RS13640 at 2882.959 kb on - strand, within ABZR87_RS13640 at 2882.966 kb on - strand, within ABZR87_RS13640 at 2882.966 kb on - strand, within ABZR87_RS13640 at 2883.067 kb on + strand at 2883.068 kb on - strand at 2883.094 kb on + strand at 2883.095 kb on - strand at 2883.147 kb on - strand, within ABZR87_RS13645 at 2883.269 kb on + strand at 2883.363 kb on + strand at 2883.469 kb on + strand at 2883.469 kb on + strand at 2883.469 kb on + strand at 2883.469 kb on + strand at 2883.469 kb on + strand at 2883.469 kb on + strand at 2883.469 kb on + strand at 2883.469 kb on + strand at 2883.470 kb on - strand at 2883.470 kb on - strand at 2883.470 kb on - strand at 2883.470 kb on - strand at 2883.470 kb on - strand at 2883.470 kb on - strand at 2883.472 kb on + strand at 2883.473 kb on - strand at 2883.544 kb on - strand at 2883.544 kb on - strand at 2883.560 kb on + strand at 2883.560 kb on + strand at 2883.561 kb on - strand at 2883.561 kb on - strand at 2883.561 kb on - strand at 2883.615 kb on - strand at 2883.624 kb on - strand at 2883.639 kb on + strand at 2883.640 kb on - strand at 2883.640 kb on - strand at 2883.640 kb on - strand at 2883.640 kb on - strand at 2883.788 kb on + strand, within ABZR87_RS13650 at 2883.788 kb on + strand, within ABZR87_RS13650 at 2883.789 kb on - strand, within ABZR87_RS13650 at 2883.789 kb on - strand, within ABZR87_RS13650 at 2883.801 kb on + strand, within ABZR87_RS13650 at 2883.801 kb on + strand, within ABZR87_RS13650 at 2883.801 kb on + strand, within ABZR87_RS13650 at 2883.802 kb on - strand, within ABZR87_RS13650 at 2883.802 kb on - strand, within ABZR87_RS13650 at 2883.821 kb on + strand, within ABZR87_RS13650 at 2883.822 kb on - strand, within ABZR87_RS13650 at 2883.822 kb on - strand, within ABZR87_RS13650 at 2883.822 kb on - strand, within ABZR87_RS13650 at 2883.983 kb on + strand, within ABZR87_RS13650 at 2883.984 kb on - strand, within ABZR87_RS13650 at 2883.984 kb on - strand, within ABZR87_RS13650 at 2883.984 kb on - strand, within ABZR87_RS13650 at 2883.984 kb on - strand, within ABZR87_RS13650 at 2883.984 kb on - strand, within ABZR87_RS13650 at 2883.984 kb on - strand, within ABZR87_RS13650 at 2883.984 kb on - strand, within ABZR87_RS13650 at 2883.998 kb on - strand, within ABZR87_RS13650 at 2884.006 kb on + strand, within ABZR87_RS13650 at 2884.006 kb on + strand, within ABZR87_RS13650 at 2884.006 kb on + strand, within ABZR87_RS13650 at 2884.006 kb on + strand, within ABZR87_RS13650 at 2884.006 kb on + strand, within ABZR87_RS13650 at 2884.006 kb on + strand, within ABZR87_RS13650 at 2884.006 kb on + strand, within ABZR87_RS13650 at 2884.007 kb on - strand, within ABZR87_RS13650 at 2884.007 kb on - strand, within ABZR87_RS13650 at 2884.007 kb on - strand, within ABZR87_RS13650 at 2884.007 kb on - strand, within ABZR87_RS13650 at 2884.007 kb on - strand, within ABZR87_RS13650 at 2884.025 kb on + strand, within ABZR87_RS13650 at 2884.054 kb on + strand, within ABZR87_RS13650 at 2884.054 kb on + strand, within ABZR87_RS13650 at 2884.054 kb on + strand, within ABZR87_RS13650 at 2884.061 kb on - strand, within ABZR87_RS13650 at 2884.061 kb on - strand, within ABZR87_RS13650 at 2884.061 kb on - strand, within ABZR87_RS13650 at 2884.087 kb on + strand, within ABZR87_RS13650 at 2884.114 kb on + strand, within ABZR87_RS13650 at 2884.114 kb on + strand, within ABZR87_RS13650 at 2884.115 kb on - strand, within ABZR87_RS13650 at 2884.115 kb on - strand, within ABZR87_RS13650 at 2884.115 kb on - strand, within ABZR87_RS13650 at 2884.115 kb on - strand, within ABZR87_RS13650 at 2884.115 kb on - strand, within ABZR87_RS13650 at 2884.115 kb on - strand, within ABZR87_RS13650 at 2884.115 kb on - strand, within ABZR87_RS13650 at 2884.177 kb on + strand, within ABZR87_RS13650 at 2884.178 kb on - strand, within ABZR87_RS13650 at 2884.178 kb on - strand, within ABZR87_RS13650 at 2884.243 kb on + strand, within ABZR87_RS13650 at 2884.244 kb on - strand, within ABZR87_RS13650 at 2884.244 kb on - strand, within ABZR87_RS13650 at 2884.248 kb on - strand, within ABZR87_RS13650
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 2,882,130 + -0.3 2,882,131 - +0.2 2,882,196 + +0.4 2,882,196 + +0.2 2,882,197 - +0.7 2,882,402 - ABZR87_RS13635 0.44 +1.5 2,882,411 + ABZR87_RS13635 0.46 -0.5 2,882,411 + ABZR87_RS13635 0.46 -0.1 2,882,411 + ABZR87_RS13635 0.46 -0.1 2,882,412 - ABZR87_RS13635 0.46 +0.0 2,882,412 - ABZR87_RS13635 0.46 +0.3 2,882,412 - ABZR87_RS13635 0.46 +1.0 2,882,412 - ABZR87_RS13635 0.46 +0.2 2,882,415 + ABZR87_RS13635 0.47 -0.0 2,882,416 - ABZR87_RS13635 0.47 -1.0 2,882,428 + ABZR87_RS13635 0.49 -0.3 2,882,428 + ABZR87_RS13635 0.49 +0.0 2,882,429 - ABZR87_RS13635 0.49 -0.1 2,882,429 - ABZR87_RS13635 0.49 -0.1 2,882,429 - ABZR87_RS13635 0.49 -0.2 2,882,429 - ABZR87_RS13635 0.49 -0.0 2,882,429 - ABZR87_RS13635 0.49 +1.0 2,882,429 - ABZR87_RS13635 0.49 +0.3 2,882,485 + ABZR87_RS13635 0.60 -1.0 2,882,485 + ABZR87_RS13635 0.60 +0.5 2,882,485 + ABZR87_RS13635 0.60 +1.4 2,882,486 - ABZR87_RS13635 0.60 +0.5 2,882,486 - ABZR87_RS13635 0.60 -1.1 2,882,486 - ABZR87_RS13635 0.60 +0.7 2,882,498 - ABZR87_RS13635 0.62 +0.9 2,882,511 + ABZR87_RS13635 0.64 +0.1 2,882,666 + +0.5 2,882,746 + -0.8 2,882,747 - +0.4 2,882,747 - -2.0 2,882,785 + ABZR87_RS13640 0.13 -0.7 2,882,785 + ABZR87_RS13640 0.13 +0.7 2,882,785 + ABZR87_RS13640 0.13 -0.0 2,882,786 - ABZR87_RS13640 0.14 +0.4 2,882,786 - ABZR87_RS13640 0.14 +0.5 2,882,786 - ABZR87_RS13640 0.14 +0.1 2,882,786 - ABZR87_RS13640 0.14 -1.8 2,882,789 + ABZR87_RS13640 0.15 -1.1 2,882,789 + ABZR87_RS13640 0.15 -0.1 2,882,790 - ABZR87_RS13640 0.15 +0.1 2,882,790 - ABZR87_RS13640 0.15 +0.3 2,882,790 - ABZR87_RS13640 0.15 +0.3 2,882,834 - ABZR87_RS13640 0.30 -0.2 2,882,834 - ABZR87_RS13640 0.30 +0.0 2,882,958 + ABZR87_RS13640 0.71 -1.1 2,882,958 + ABZR87_RS13640 0.71 +0.1 2,882,959 - ABZR87_RS13640 0.71 -0.1 2,882,959 - ABZR87_RS13640 0.71 +0.5 2,882,959 - ABZR87_RS13640 0.71 +0.1 2,882,966 - ABZR87_RS13640 0.74 +0.1 2,882,966 - ABZR87_RS13640 0.74 -0.6 2,883,067 + -0.4 2,883,068 - +0.2 2,883,094 + -0.2 2,883,095 - +0.4 2,883,147 - ABZR87_RS13645 0.21 -0.8 2,883,269 + -0.4 2,883,363 + -1.0 2,883,469 + -1.0 2,883,469 + -0.2 2,883,469 + -0.0 2,883,469 + -0.5 2,883,469 + +0.3 2,883,469 + -1.4 2,883,469 + +0.3 2,883,469 + -0.0 2,883,470 - +0.0 2,883,470 - -0.3 2,883,470 - +0.7 2,883,470 - -0.3 2,883,470 - +0.0 2,883,470 - -0.0 2,883,472 + +0.1 2,883,473 - +0.2 2,883,544 - -0.1 2,883,544 - -0.4 2,883,560 + -0.5 2,883,560 + +1.0 2,883,561 - -0.5 2,883,561 - +0.8 2,883,561 - +0.9 2,883,615 - +0.3 2,883,624 - +0.3 2,883,639 + -0.2 2,883,640 - -0.3 2,883,640 - -0.5 2,883,640 - -0.3 2,883,640 - -0.3 2,883,788 + ABZR87_RS13650 0.16 +0.5 2,883,788 + ABZR87_RS13650 0.16 -0.6 2,883,789 - ABZR87_RS13650 0.16 -1.1 2,883,789 - ABZR87_RS13650 0.16 -0.3 2,883,801 + ABZR87_RS13650 0.16 +0.2 2,883,801 + ABZR87_RS13650 0.16 -0.4 2,883,801 + ABZR87_RS13650 0.16 -1.2 2,883,802 - ABZR87_RS13650 0.16 -0.2 2,883,802 - ABZR87_RS13650 0.16 -0.3 2,883,821 + ABZR87_RS13650 0.17 +0.3 2,883,822 - ABZR87_RS13650 0.17 -0.1 2,883,822 - ABZR87_RS13650 0.17 +0.3 2,883,822 - ABZR87_RS13650 0.17 +1.3 2,883,983 + ABZR87_RS13650 0.24 -0.5 2,883,984 - ABZR87_RS13650 0.24 +0.4 2,883,984 - ABZR87_RS13650 0.24 -0.1 2,883,984 - ABZR87_RS13650 0.24 +0.0 2,883,984 - ABZR87_RS13650 0.24 -0.7 2,883,984 - ABZR87_RS13650 0.24 -0.3 2,883,984 - ABZR87_RS13650 0.24 +0.1 2,883,984 - ABZR87_RS13650 0.24 +0.4 2,883,998 - ABZR87_RS13650 0.24 -0.1 2,884,006 + ABZR87_RS13650 0.25 +0.8 2,884,006 + ABZR87_RS13650 0.25 -0.8 2,884,006 + ABZR87_RS13650 0.25 -0.4 2,884,006 + ABZR87_RS13650 0.25 +0.9 2,884,006 + ABZR87_RS13650 0.25 -0.4 2,884,006 + ABZR87_RS13650 0.25 +0.4 2,884,006 + ABZR87_RS13650 0.25 -0.1 2,884,007 - ABZR87_RS13650 0.25 +0.4 2,884,007 - ABZR87_RS13650 0.25 +0.0 2,884,007 - ABZR87_RS13650 0.25 +0.9 2,884,007 - ABZR87_RS13650 0.25 +0.5 2,884,007 - ABZR87_RS13650 0.25 -0.1 2,884,025 + ABZR87_RS13650 0.25 +0.7 2,884,054 + ABZR87_RS13650 0.27 +0.0 2,884,054 + ABZR87_RS13650 0.27 +1.0 2,884,054 + ABZR87_RS13650 0.27 +0.4 2,884,061 - ABZR87_RS13650 0.27 +0.8 2,884,061 - ABZR87_RS13650 0.27 +0.2 2,884,061 - ABZR87_RS13650 0.27 -2.1 2,884,087 + ABZR87_RS13650 0.28 -0.5 2,884,114 + ABZR87_RS13650 0.29 +0.7 2,884,114 + ABZR87_RS13650 0.29 +0.0 2,884,115 - ABZR87_RS13650 0.29 -0.4 2,884,115 - ABZR87_RS13650 0.29 +0.7 2,884,115 - ABZR87_RS13650 0.29 -0.3 2,884,115 - ABZR87_RS13650 0.29 +1.0 2,884,115 - ABZR87_RS13650 0.29 +0.3 2,884,115 - ABZR87_RS13650 0.29 -0.0 2,884,115 - ABZR87_RS13650 0.29 -0.7 2,884,177 + ABZR87_RS13650 0.32 -0.0 2,884,178 - ABZR87_RS13650 0.32 +1.8 2,884,178 - ABZR87_RS13650 0.32 +0.5 2,884,243 + ABZR87_RS13650 0.34 +0.3 2,884,244 - ABZR87_RS13650 0.34 +0.2 2,884,244 - ABZR87_RS13650 0.34 -0.3 2,884,248 - ABZR87_RS13650 0.34 +0.5
Or see this region's nucleotide sequence