Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS12255 and ABZR87_RS12260 are separated by 19 nucleotides ABZR87_RS12260 and ABZR87_RS12265 are separated by 369 nucleotides ABZR87_RS12265 and ABZR87_RS12270 are separated by 162 nucleotides
ABZR87_RS12255: ABZR87_RS12255 - xanthine dehydrogenase family protein molybdopterin-binding subunit, at 2,598,406 to 2,600,784
_RS12255
ABZR87_RS12260: ABZR87_RS12260 - (2Fe-2S)-binding protein, at 2,600,804 to 2,601,331
_RS12260
ABZR87_RS12265: ABZR87_RS12265 - hypothetical protein, at 2,601,701 to 2,601,877
_RS12265
ABZR87_RS12270: ABZR87_RS12270 - CreA family protein, at 2,602,040 to 2,602,519
_RS12270
Position (kb)
2600
2601
2602 Strain fitness (log2 ratio)
-2
-1
0
1 at 2599.812 kb on + strand, within ABZR87_RS12255 at 2599.812 kb on + strand, within ABZR87_RS12255 at 2599.812 kb on + strand, within ABZR87_RS12255 at 2599.813 kb on - strand, within ABZR87_RS12255 at 2599.813 kb on - strand, within ABZR87_RS12255 at 2600.111 kb on + strand, within ABZR87_RS12255 at 2600.112 kb on - strand, within ABZR87_RS12255 at 2600.112 kb on - strand, within ABZR87_RS12255 at 2600.112 kb on - strand, within ABZR87_RS12255 at 2600.112 kb on - strand, within ABZR87_RS12255 at 2600.120 kb on + strand, within ABZR87_RS12255 at 2600.120 kb on + strand, within ABZR87_RS12255 at 2600.120 kb on + strand, within ABZR87_RS12255 at 2600.120 kb on + strand, within ABZR87_RS12255 at 2600.120 kb on + strand, within ABZR87_RS12255 at 2600.120 kb on + strand, within ABZR87_RS12255 at 2600.120 kb on + strand, within ABZR87_RS12255 at 2600.120 kb on + strand, within ABZR87_RS12255 at 2600.121 kb on - strand, within ABZR87_RS12255 at 2600.121 kb on - strand, within ABZR87_RS12255 at 2600.121 kb on - strand, within ABZR87_RS12255 at 2600.273 kb on + strand, within ABZR87_RS12255 at 2600.273 kb on + strand, within ABZR87_RS12255 at 2600.273 kb on + strand, within ABZR87_RS12255 at 2600.274 kb on - strand, within ABZR87_RS12255 at 2600.274 kb on - strand, within ABZR87_RS12255 at 2600.274 kb on - strand, within ABZR87_RS12255 at 2600.274 kb on - strand, within ABZR87_RS12255 at 2600.660 kb on + strand at 2600.660 kb on + strand at 2600.660 kb on + strand at 2600.661 kb on - strand at 2600.693 kb on + strand at 2600.693 kb on + strand at 2600.913 kb on + strand, within ABZR87_RS12260 at 2600.914 kb on - strand, within ABZR87_RS12260 at 2601.088 kb on - strand, within ABZR87_RS12260 at 2601.268 kb on + strand, within ABZR87_RS12260 at 2601.429 kb on - strand at 2601.435 kb on + strand at 2601.520 kb on + strand at 2601.521 kb on - strand at 2601.635 kb on + strand at 2601.635 kb on + strand at 2601.644 kb on + strand at 2601.645 kb on - strand at 2601.653 kb on + strand at 2601.653 kb on + strand at 2601.653 kb on + strand at 2601.653 kb on + strand at 2601.654 kb on - strand at 2601.655 kb on + strand at 2601.655 kb on + strand at 2601.656 kb on - strand at 2601.657 kb on + strand at 2601.657 kb on + strand at 2601.657 kb on + strand at 2601.657 kb on + strand at 2601.657 kb on + strand at 2601.657 kb on + strand at 2601.657 kb on + strand at 2601.657 kb on + strand at 2601.657 kb on + strand at 2601.658 kb on - strand at 2601.658 kb on - strand at 2601.658 kb on - strand at 2601.658 kb on - strand at 2601.658 kb on - strand at 2601.658 kb on - strand at 2601.663 kb on + strand at 2601.664 kb on - strand at 2601.664 kb on - strand at 2601.689 kb on + strand at 2601.689 kb on + strand at 2601.792 kb on + strand, within ABZR87_RS12265 at 2601.793 kb on - strand, within ABZR87_RS12265 at 2601.795 kb on + strand, within ABZR87_RS12265 at 2601.795 kb on + strand, within ABZR87_RS12265 at 2601.795 kb on + strand, within ABZR87_RS12265 at 2601.795 kb on + strand, within ABZR87_RS12265 at 2601.795 kb on + strand, within ABZR87_RS12265 at 2601.796 kb on - strand, within ABZR87_RS12265 at 2601.796 kb on - strand, within ABZR87_RS12265 at 2601.796 kb on - strand, within ABZR87_RS12265 at 2601.796 kb on - strand, within ABZR87_RS12265 at 2601.796 kb on - strand, within ABZR87_RS12265 at 2601.798 kb on + strand, within ABZR87_RS12265 at 2601.798 kb on + strand, within ABZR87_RS12265 at 2601.798 kb on + strand, within ABZR87_RS12265 at 2601.798 kb on + strand, within ABZR87_RS12265 at 2601.798 kb on + strand, within ABZR87_RS12265 at 2601.798 kb on + strand, within ABZR87_RS12265 at 2601.798 kb on + strand, within ABZR87_RS12265 at 2601.799 kb on - strand, within ABZR87_RS12265 at 2601.799 kb on - strand, within ABZR87_RS12265 at 2601.799 kb on - strand, within ABZR87_RS12265 at 2601.799 kb on - strand, within ABZR87_RS12265 at 2601.799 kb on - strand, within ABZR87_RS12265 at 2601.799 kb on - strand, within ABZR87_RS12265 at 2601.799 kb on - strand, within ABZR87_RS12265 at 2601.799 kb on - strand, within ABZR87_RS12265 at 2601.799 kb on - strand, within ABZR87_RS12265 at 2601.799 kb on - strand, within ABZR87_RS12265 at 2601.802 kb on + strand, within ABZR87_RS12265 at 2601.802 kb on + strand, within ABZR87_RS12265 at 2601.802 kb on + strand, within ABZR87_RS12265 at 2601.803 kb on - strand, within ABZR87_RS12265 at 2601.803 kb on - strand, within ABZR87_RS12265 at 2601.920 kb on + strand at 2601.920 kb on + strand at 2601.922 kb on + strand at 2601.947 kb on - strand at 2601.951 kb on - strand at 2601.951 kb on - strand at 2601.956 kb on + strand at 2601.956 kb on + strand at 2601.956 kb on + strand at 2601.957 kb on - strand at 2601.957 kb on - strand at 2601.957 kb on - strand at 2601.960 kb on + strand at 2601.960 kb on + strand at 2601.960 kb on + strand at 2601.960 kb on + strand at 2601.960 kb on + strand at 2601.960 kb on + strand at 2601.960 kb on + strand at 2601.960 kb on + strand at 2601.960 kb on + strand at 2601.961 kb on - strand at 2601.961 kb on - strand at 2601.961 kb on - strand at 2601.961 kb on - strand at 2601.961 kb on - strand at 2601.961 kb on - strand at 2601.961 kb on - strand at 2602.041 kb on + strand at 2602.041 kb on + strand at 2602.041 kb on + strand at 2602.125 kb on + strand, within ABZR87_RS12270 at 2602.126 kb on - strand, within ABZR87_RS12270 at 2602.126 kb on - strand, within ABZR87_RS12270 at 2602.126 kb on - strand, within ABZR87_RS12270 at 2602.134 kb on + strand, within ABZR87_RS12270 at 2602.135 kb on - strand, within ABZR87_RS12270
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 2,599,812 + ABZR87_RS12255 0.59 -0.7 2,599,812 + ABZR87_RS12255 0.59 +0.1 2,599,812 + ABZR87_RS12255 0.59 -1.0 2,599,813 - ABZR87_RS12255 0.59 -1.2 2,599,813 - ABZR87_RS12255 0.59 -0.6 2,600,111 + ABZR87_RS12255 0.72 +0.9 2,600,112 - ABZR87_RS12255 0.72 -0.5 2,600,112 - ABZR87_RS12255 0.72 -0.3 2,600,112 - ABZR87_RS12255 0.72 -0.8 2,600,112 - ABZR87_RS12255 0.72 -0.4 2,600,120 + ABZR87_RS12255 0.72 -0.6 2,600,120 + ABZR87_RS12255 0.72 -0.1 2,600,120 + ABZR87_RS12255 0.72 -0.1 2,600,120 + ABZR87_RS12255 0.72 +0.6 2,600,120 + ABZR87_RS12255 0.72 +0.3 2,600,120 + ABZR87_RS12255 0.72 -0.2 2,600,120 + ABZR87_RS12255 0.72 +1.0 2,600,120 + ABZR87_RS12255 0.72 +0.9 2,600,121 - ABZR87_RS12255 0.72 -0.1 2,600,121 - ABZR87_RS12255 0.72 +0.7 2,600,121 - ABZR87_RS12255 0.72 +0.4 2,600,273 + ABZR87_RS12255 0.78 +0.5 2,600,273 + ABZR87_RS12255 0.78 -0.6 2,600,273 + ABZR87_RS12255 0.78 +0.0 2,600,274 - ABZR87_RS12255 0.79 -1.5 2,600,274 - ABZR87_RS12255 0.79 -0.6 2,600,274 - ABZR87_RS12255 0.79 -1.5 2,600,274 - ABZR87_RS12255 0.79 -0.1 2,600,660 + +0.2 2,600,660 + +0.3 2,600,660 + -0.4 2,600,661 - +0.2 2,600,693 + -1.5 2,600,693 + +0.2 2,600,913 + ABZR87_RS12260 0.21 -0.7 2,600,914 - ABZR87_RS12260 0.21 -1.0 2,601,088 - ABZR87_RS12260 0.54 -0.2 2,601,268 + ABZR87_RS12260 0.88 -0.6 2,601,429 - +0.2 2,601,435 + +0.2 2,601,520 + +0.5 2,601,521 - +0.1 2,601,635 + +0.1 2,601,635 + +0.6 2,601,644 + +0.1 2,601,645 - +0.5 2,601,653 + +0.6 2,601,653 + -0.3 2,601,653 + +0.3 2,601,653 + -0.6 2,601,654 - +0.0 2,601,655 + -0.3 2,601,655 + +0.7 2,601,656 - +0.4 2,601,657 + -0.1 2,601,657 + +1.1 2,601,657 + -0.1 2,601,657 + -1.5 2,601,657 + +0.1 2,601,657 + +0.7 2,601,657 + +0.1 2,601,657 + +0.2 2,601,657 + -0.4 2,601,658 - +0.2 2,601,658 - +0.1 2,601,658 - +0.6 2,601,658 - -0.2 2,601,658 - -0.4 2,601,658 - -0.4 2,601,663 + +0.4 2,601,664 - +0.0 2,601,664 - +0.1 2,601,689 + +0.6 2,601,689 + +1.0 2,601,792 + ABZR87_RS12265 0.51 -0.1 2,601,793 - ABZR87_RS12265 0.52 +0.9 2,601,795 + ABZR87_RS12265 0.53 -0.4 2,601,795 + ABZR87_RS12265 0.53 +1.6 2,601,795 + ABZR87_RS12265 0.53 -1.1 2,601,795 + ABZR87_RS12265 0.53 -1.0 2,601,795 + ABZR87_RS12265 0.53 -0.1 2,601,796 - ABZR87_RS12265 0.54 -0.1 2,601,796 - ABZR87_RS12265 0.54 -0.5 2,601,796 - ABZR87_RS12265 0.54 +0.9 2,601,796 - ABZR87_RS12265 0.54 -1.1 2,601,796 - ABZR87_RS12265 0.54 +0.3 2,601,798 + ABZR87_RS12265 0.55 -0.2 2,601,798 + ABZR87_RS12265 0.55 -0.2 2,601,798 + ABZR87_RS12265 0.55 +0.2 2,601,798 + ABZR87_RS12265 0.55 +0.4 2,601,798 + ABZR87_RS12265 0.55 -0.3 2,601,798 + ABZR87_RS12265 0.55 +0.2 2,601,798 + ABZR87_RS12265 0.55 +0.1 2,601,799 - ABZR87_RS12265 0.55 -0.2 2,601,799 - ABZR87_RS12265 0.55 -0.3 2,601,799 - ABZR87_RS12265 0.55 -0.1 2,601,799 - ABZR87_RS12265 0.55 +0.9 2,601,799 - ABZR87_RS12265 0.55 +0.1 2,601,799 - ABZR87_RS12265 0.55 -1.0 2,601,799 - ABZR87_RS12265 0.55 +1.3 2,601,799 - ABZR87_RS12265 0.55 +0.2 2,601,799 - ABZR87_RS12265 0.55 -0.0 2,601,799 - ABZR87_RS12265 0.55 -0.8 2,601,802 + ABZR87_RS12265 0.57 +0.3 2,601,802 + ABZR87_RS12265 0.57 -0.2 2,601,802 + ABZR87_RS12265 0.57 -0.1 2,601,803 - ABZR87_RS12265 0.58 -0.1 2,601,803 - ABZR87_RS12265 0.58 -0.2 2,601,920 + -0.7 2,601,920 + -0.4 2,601,922 + +1.0 2,601,947 - +0.0 2,601,951 - -0.4 2,601,951 - +0.1 2,601,956 + -0.7 2,601,956 + -0.4 2,601,956 + +0.2 2,601,957 - +0.5 2,601,957 - +0.3 2,601,957 - +0.5 2,601,960 + -0.5 2,601,960 + +0.0 2,601,960 + -0.8 2,601,960 + -0.3 2,601,960 + +0.4 2,601,960 + +0.5 2,601,960 + +0.1 2,601,960 + +0.0 2,601,960 + -2.0 2,601,961 - +0.1 2,601,961 - -0.1 2,601,961 - -0.4 2,601,961 - -0.8 2,601,961 - +0.6 2,601,961 - +0.1 2,601,961 - -0.0 2,602,041 + +0.2 2,602,041 + -0.8 2,602,041 + +0.3 2,602,125 + ABZR87_RS12270 0.18 +0.0 2,602,126 - ABZR87_RS12270 0.18 +0.1 2,602,126 - ABZR87_RS12270 0.18 +0.4 2,602,126 - ABZR87_RS12270 0.18 +0.1 2,602,134 + ABZR87_RS12270 0.20 -0.1 2,602,135 - ABZR87_RS12270 0.20 +0.6
Or see this region's nucleotide sequence