Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS11920 and ABZR87_RS11925 are separated by 230 nucleotides ABZR87_RS11925 and ABZR87_RS11930 are separated by 177 nucleotides ABZR87_RS11930 and ABZR87_RS11935 are separated by 49 nucleotides
ABZR87_RS11920: ABZR87_RS11920 - pyruvate, water dikinase regulatory protein, at 2,531,812 to 2,532,663
_RS11920
ABZR87_RS11925: ABZR87_RS11925 - phosphoenolpyruvate synthase, at 2,532,894 to 2,535,281
_RS11925
ABZR87_RS11930: ABZR87_RS11930 - NfeD family protein, at 2,535,459 to 2,535,884
_RS11930
ABZR87_RS11935: ABZR87_RS11935 - SPFH domain-containing protein, at 2,535,934 to 2,536,860
_RS11935
Position (kb)
2532
2533
2534
2535
2536 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2532.367 kb on - strand, within ABZR87_RS11920 at 2532.717 kb on + strand at 2532.717 kb on + strand at 2532.717 kb on + strand at 2532.717 kb on + strand at 2532.718 kb on - strand at 2532.722 kb on + strand at 2532.722 kb on + strand at 2532.736 kb on + strand at 2532.737 kb on - strand at 2532.740 kb on + strand at 2532.740 kb on + strand at 2532.741 kb on - strand at 2532.810 kb on + strand at 2532.810 kb on + strand at 2532.810 kb on + strand at 2532.810 kb on + strand at 2532.811 kb on - strand at 2532.826 kb on - strand at 2532.878 kb on + strand at 2532.878 kb on + strand at 2532.878 kb on + strand at 2532.878 kb on + strand at 2532.879 kb on - strand at 2532.884 kb on - strand at 2532.893 kb on + strand at 2532.893 kb on + strand at 2532.893 kb on + strand at 2532.893 kb on + strand at 2532.893 kb on + strand at 2532.893 kb on + strand at 2532.893 kb on + strand at 2532.893 kb on + strand at 2532.893 kb on + strand at 2532.894 kb on - strand at 2532.894 kb on - strand at 2532.894 kb on - strand at 2532.894 kb on - strand at 2532.894 kb on - strand at 2532.894 kb on - strand at 2532.894 kb on - strand at 2532.894 kb on - strand at 2532.894 kb on - strand at 2532.899 kb on + strand at 2532.899 kb on + strand at 2532.921 kb on + strand at 2532.921 kb on + strand at 2532.921 kb on + strand at 2532.921 kb on + strand at 2532.922 kb on - strand at 2532.922 kb on - strand at 2532.922 kb on - strand at 2532.922 kb on - strand at 2532.922 kb on - strand at 2533.230 kb on + strand, within ABZR87_RS11925 at 2533.230 kb on + strand, within ABZR87_RS11925 at 2533.231 kb on - strand, within ABZR87_RS11925 at 2533.231 kb on - strand, within ABZR87_RS11925 at 2533.231 kb on - strand, within ABZR87_RS11925 at 2533.338 kb on + strand, within ABZR87_RS11925 at 2533.339 kb on - strand, within ABZR87_RS11925 at 2533.339 kb on - strand, within ABZR87_RS11925 at 2533.339 kb on - strand, within ABZR87_RS11925 at 2533.401 kb on + strand, within ABZR87_RS11925 at 2533.401 kb on + strand, within ABZR87_RS11925 at 2533.402 kb on - strand, within ABZR87_RS11925 at 2533.572 kb on + strand, within ABZR87_RS11925 at 2533.572 kb on + strand, within ABZR87_RS11925 at 2533.623 kb on + strand, within ABZR87_RS11925 at 2533.623 kb on + strand, within ABZR87_RS11925 at 2533.623 kb on + strand, within ABZR87_RS11925 at 2533.623 kb on + strand, within ABZR87_RS11925 at 2533.624 kb on - strand, within ABZR87_RS11925 at 2533.656 kb on + strand, within ABZR87_RS11925 at 2533.656 kb on + strand, within ABZR87_RS11925 at 2533.656 kb on + strand, within ABZR87_RS11925 at 2533.656 kb on + strand, within ABZR87_RS11925 at 2533.809 kb on + strand, within ABZR87_RS11925 at 2533.810 kb on - strand, within ABZR87_RS11925 at 2533.834 kb on - strand, within ABZR87_RS11925 at 2533.834 kb on - strand, within ABZR87_RS11925 at 2533.887 kb on + strand, within ABZR87_RS11925 at 2533.887 kb on + strand, within ABZR87_RS11925 at 2533.888 kb on - strand, within ABZR87_RS11925 at 2533.888 kb on - strand, within ABZR87_RS11925 at 2533.888 kb on - strand, within ABZR87_RS11925 at 2533.888 kb on - strand, within ABZR87_RS11925 at 2533.888 kb on - strand, within ABZR87_RS11925 at 2533.888 kb on - strand, within ABZR87_RS11925 at 2533.888 kb on - strand, within ABZR87_RS11925 at 2533.888 kb on - strand, within ABZR87_RS11925 at 2533.888 kb on - strand, within ABZR87_RS11925 at 2533.888 kb on - strand, within ABZR87_RS11925 at 2534.156 kb on + strand, within ABZR87_RS11925 at 2534.156 kb on + strand, within ABZR87_RS11925 at 2534.289 kb on + strand, within ABZR87_RS11925 at 2534.289 kb on + strand, within ABZR87_RS11925 at 2534.289 kb on + strand, within ABZR87_RS11925 at 2534.290 kb on - strand, within ABZR87_RS11925 at 2534.290 kb on - strand, within ABZR87_RS11925 at 2534.290 kb on - strand, within ABZR87_RS11925 at 2534.290 kb on - strand, within ABZR87_RS11925 at 2534.565 kb on + strand, within ABZR87_RS11925 at 2534.565 kb on + strand, within ABZR87_RS11925 at 2534.565 kb on + strand, within ABZR87_RS11925 at 2534.566 kb on - strand, within ABZR87_RS11925 at 2534.566 kb on - strand, within ABZR87_RS11925 at 2534.594 kb on + strand, within ABZR87_RS11925 at 2534.595 kb on - strand, within ABZR87_RS11925 at 2534.614 kb on - strand, within ABZR87_RS11925 at 2534.661 kb on + strand, within ABZR87_RS11925 at 2534.661 kb on + strand, within ABZR87_RS11925 at 2534.662 kb on - strand, within ABZR87_RS11925 at 2534.740 kb on - strand, within ABZR87_RS11925 at 2534.740 kb on - strand, within ABZR87_RS11925 at 2534.849 kb on + strand, within ABZR87_RS11925 at 2534.849 kb on + strand, within ABZR87_RS11925 at 2534.849 kb on + strand, within ABZR87_RS11925 at 2534.850 kb on - strand, within ABZR87_RS11925 at 2534.850 kb on - strand, within ABZR87_RS11925 at 2534.892 kb on + strand, within ABZR87_RS11925 at 2534.982 kb on + strand, within ABZR87_RS11925 at 2534.982 kb on + strand, within ABZR87_RS11925 at 2534.983 kb on - strand, within ABZR87_RS11925 at 2534.983 kb on - strand, within ABZR87_RS11925 at 2535.147 kb on + strand at 2535.147 kb on + strand at 2535.148 kb on - strand at 2535.148 kb on - strand at 2535.148 kb on - strand at 2535.148 kb on - strand at 2535.291 kb on - strand at 2535.312 kb on + strand at 2535.312 kb on + strand at 2535.312 kb on + strand at 2535.458 kb on + strand at 2535.458 kb on + strand at 2535.458 kb on + strand at 2535.458 kb on + strand at 2535.459 kb on - strand at 2535.459 kb on - strand at 2535.459 kb on - strand at 2535.531 kb on + strand, within ABZR87_RS11930 at 2535.531 kb on + strand, within ABZR87_RS11930 at 2535.531 kb on + strand, within ABZR87_RS11930 at 2535.532 kb on - strand, within ABZR87_RS11930 at 2535.532 kb on - strand, within ABZR87_RS11930 at 2535.532 kb on - strand, within ABZR87_RS11930 at 2535.532 kb on - strand, within ABZR87_RS11930 at 2535.532 kb on - strand, within ABZR87_RS11930 at 2535.883 kb on - strand at 2535.912 kb on + strand at 2535.912 kb on + strand at 2535.912 kb on + strand at 2535.912 kb on + strand at 2535.913 kb on - strand at 2535.913 kb on - strand at 2535.913 kb on - strand at 2535.913 kb on - strand at 2535.913 kb on - strand at 2535.913 kb on - strand at 2535.913 kb on - strand at 2535.913 kb on - strand at 2535.933 kb on + strand at 2535.933 kb on + strand at 2535.933 kb on + strand at 2535.933 kb on + strand at 2535.933 kb on + strand at 2535.934 kb on - strand at 2535.934 kb on - strand at 2535.934 kb on - strand at 2535.934 kb on - strand at 2535.934 kb on - strand at 2535.934 kb on - strand at 2535.934 kb on - strand at 2535.934 kb on - strand at 2535.934 kb on - strand at 2536.051 kb on + strand, within ABZR87_RS11935 at 2536.052 kb on - strand, within ABZR87_RS11935 at 2536.052 kb on - strand, within ABZR87_RS11935 at 2536.111 kb on + strand, within ABZR87_RS11935 at 2536.111 kb on + strand, within ABZR87_RS11935 at 2536.111 kb on + strand, within ABZR87_RS11935 at 2536.111 kb on + strand, within ABZR87_RS11935 at 2536.111 kb on + strand, within ABZR87_RS11935 at 2536.111 kb on + strand, within ABZR87_RS11935 at 2536.161 kb on + strand, within ABZR87_RS11935 at 2536.161 kb on + strand, within ABZR87_RS11935 at 2536.161 kb on + strand, within ABZR87_RS11935 at 2536.161 kb on + strand, within ABZR87_RS11935 at 2536.162 kb on - strand, within ABZR87_RS11935 at 2536.162 kb on - strand, within ABZR87_RS11935 at 2536.162 kb on - strand, within ABZR87_RS11935 at 2536.204 kb on + strand, within ABZR87_RS11935 at 2536.205 kb on - strand, within ABZR87_RS11935 at 2536.205 kb on - strand, within ABZR87_RS11935 at 2536.205 kb on - strand, within ABZR87_RS11935 at 2536.237 kb on + strand, within ABZR87_RS11935 at 2536.237 kb on + strand, within ABZR87_RS11935 at 2536.238 kb on - strand, within ABZR87_RS11935 at 2536.238 kb on - strand, within ABZR87_RS11935
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 2,532,367 - ABZR87_RS11920 0.65 -0.7 2,532,717 + -0.1 2,532,717 + -0.2 2,532,717 + +0.0 2,532,717 + +0.4 2,532,718 - -0.6 2,532,722 + +0.4 2,532,722 + +0.6 2,532,736 + -0.8 2,532,737 - -0.6 2,532,740 + -0.9 2,532,740 + +0.2 2,532,741 - +0.6 2,532,810 + -0.5 2,532,810 + -0.2 2,532,810 + +0.3 2,532,810 + -1.0 2,532,811 - -0.3 2,532,826 - -1.8 2,532,878 + -0.2 2,532,878 + +0.1 2,532,878 + -0.6 2,532,878 + -0.6 2,532,879 - -1.4 2,532,884 - -1.0 2,532,893 + -0.1 2,532,893 + -0.4 2,532,893 + -0.3 2,532,893 + -0.9 2,532,893 + -0.4 2,532,893 + -0.5 2,532,893 + -1.6 2,532,893 + +0.0 2,532,893 + -0.1 2,532,894 - -0.3 2,532,894 - -1.1 2,532,894 - -0.7 2,532,894 - -1.6 2,532,894 - +0.4 2,532,894 - -0.4 2,532,894 - -1.4 2,532,894 - -0.5 2,532,894 - -3.0 2,532,899 + -1.2 2,532,899 + -0.3 2,532,921 + -0.3 2,532,921 + -1.4 2,532,921 + -0.5 2,532,921 + +0.2 2,532,922 - +0.1 2,532,922 - -0.1 2,532,922 - -1.2 2,532,922 - -1.0 2,532,922 - -0.7 2,533,230 + ABZR87_RS11925 0.14 -0.4 2,533,230 + ABZR87_RS11925 0.14 -1.2 2,533,231 - ABZR87_RS11925 0.14 -0.9 2,533,231 - ABZR87_RS11925 0.14 -2.2 2,533,231 - ABZR87_RS11925 0.14 -0.1 2,533,338 + ABZR87_RS11925 0.19 -1.5 2,533,339 - ABZR87_RS11925 0.19 -2.1 2,533,339 - ABZR87_RS11925 0.19 -0.3 2,533,339 - ABZR87_RS11925 0.19 -0.3 2,533,401 + ABZR87_RS11925 0.21 +0.3 2,533,401 + ABZR87_RS11925 0.21 -0.8 2,533,402 - ABZR87_RS11925 0.21 -0.0 2,533,572 + ABZR87_RS11925 0.28 -0.3 2,533,572 + ABZR87_RS11925 0.28 -0.3 2,533,623 + ABZR87_RS11925 0.31 -1.2 2,533,623 + ABZR87_RS11925 0.31 -0.7 2,533,623 + ABZR87_RS11925 0.31 -1.7 2,533,623 + ABZR87_RS11925 0.31 +0.9 2,533,624 - ABZR87_RS11925 0.31 -1.3 2,533,656 + ABZR87_RS11925 0.32 -0.4 2,533,656 + ABZR87_RS11925 0.32 +0.7 2,533,656 + ABZR87_RS11925 0.32 +0.5 2,533,656 + ABZR87_RS11925 0.32 -2.2 2,533,809 + ABZR87_RS11925 0.38 -0.8 2,533,810 - ABZR87_RS11925 0.38 -1.2 2,533,834 - ABZR87_RS11925 0.39 -1.6 2,533,834 - ABZR87_RS11925 0.39 -0.4 2,533,887 + ABZR87_RS11925 0.42 -0.9 2,533,887 + ABZR87_RS11925 0.42 -0.2 2,533,888 - ABZR87_RS11925 0.42 +0.7 2,533,888 - ABZR87_RS11925 0.42 -0.2 2,533,888 - ABZR87_RS11925 0.42 -3.2 2,533,888 - ABZR87_RS11925 0.42 -1.2 2,533,888 - ABZR87_RS11925 0.42 -0.8 2,533,888 - ABZR87_RS11925 0.42 -2.4 2,533,888 - ABZR87_RS11925 0.42 -1.0 2,533,888 - ABZR87_RS11925 0.42 -3.3 2,533,888 - ABZR87_RS11925 0.42 -0.5 2,533,888 - ABZR87_RS11925 0.42 -1.8 2,534,156 + ABZR87_RS11925 0.53 +0.8 2,534,156 + ABZR87_RS11925 0.53 -1.9 2,534,289 + ABZR87_RS11925 0.58 +0.1 2,534,289 + ABZR87_RS11925 0.58 -1.0 2,534,289 + ABZR87_RS11925 0.58 -1.9 2,534,290 - ABZR87_RS11925 0.58 -0.7 2,534,290 - ABZR87_RS11925 0.58 -0.0 2,534,290 - ABZR87_RS11925 0.58 -1.9 2,534,290 - ABZR87_RS11925 0.58 -0.3 2,534,565 + ABZR87_RS11925 0.70 -2.0 2,534,565 + ABZR87_RS11925 0.70 -2.1 2,534,565 + ABZR87_RS11925 0.70 -0.8 2,534,566 - ABZR87_RS11925 0.70 -1.4 2,534,566 - ABZR87_RS11925 0.70 -2.2 2,534,594 + ABZR87_RS11925 0.71 -1.8 2,534,595 - ABZR87_RS11925 0.71 -1.3 2,534,614 - ABZR87_RS11925 0.72 -1.7 2,534,661 + ABZR87_RS11925 0.74 -1.1 2,534,661 + ABZR87_RS11925 0.74 -1.2 2,534,662 - ABZR87_RS11925 0.74 -0.3 2,534,740 - ABZR87_RS11925 0.77 -0.4 2,534,740 - ABZR87_RS11925 0.77 -2.8 2,534,849 + ABZR87_RS11925 0.82 -1.1 2,534,849 + ABZR87_RS11925 0.82 -0.4 2,534,849 + ABZR87_RS11925 0.82 +0.2 2,534,850 - ABZR87_RS11925 0.82 +0.1 2,534,850 - ABZR87_RS11925 0.82 -0.7 2,534,892 + ABZR87_RS11925 0.84 -1.4 2,534,982 + ABZR87_RS11925 0.87 -2.4 2,534,982 + ABZR87_RS11925 0.87 -1.0 2,534,983 - ABZR87_RS11925 0.87 -2.3 2,534,983 - ABZR87_RS11925 0.87 -1.5 2,535,147 + -0.9 2,535,147 + +0.1 2,535,148 - -2.8 2,535,148 - -1.3 2,535,148 - -1.2 2,535,148 - -1.9 2,535,291 - -1.4 2,535,312 + -0.4 2,535,312 + +1.6 2,535,312 + -0.6 2,535,458 + -0.4 2,535,458 + -0.6 2,535,458 + +0.6 2,535,458 + +0.1 2,535,459 - -0.5 2,535,459 - -1.5 2,535,459 - -0.1 2,535,531 + ABZR87_RS11930 0.17 +0.5 2,535,531 + ABZR87_RS11930 0.17 -0.5 2,535,531 + ABZR87_RS11930 0.17 +0.6 2,535,532 - ABZR87_RS11930 0.17 -0.5 2,535,532 - ABZR87_RS11930 0.17 -0.1 2,535,532 - ABZR87_RS11930 0.17 +0.0 2,535,532 - ABZR87_RS11930 0.17 +0.4 2,535,532 - ABZR87_RS11930 0.17 +0.0 2,535,883 - -0.1 2,535,912 + -1.2 2,535,912 + -0.4 2,535,912 + +0.4 2,535,912 + -0.2 2,535,913 - -0.4 2,535,913 - +0.6 2,535,913 - -0.2 2,535,913 - +0.4 2,535,913 - -0.8 2,535,913 - +0.8 2,535,913 - -0.0 2,535,913 - -0.5 2,535,933 + +0.2 2,535,933 + -0.1 2,535,933 + +0.1 2,535,933 + +0.2 2,535,933 + -0.4 2,535,934 - -0.2 2,535,934 - -0.6 2,535,934 - -0.9 2,535,934 - +0.1 2,535,934 - -0.2 2,535,934 - -0.4 2,535,934 - -0.8 2,535,934 - +0.2 2,535,934 - +0.7 2,536,051 + ABZR87_RS11935 0.13 +0.3 2,536,052 - ABZR87_RS11935 0.13 -0.3 2,536,052 - ABZR87_RS11935 0.13 -0.6 2,536,111 + ABZR87_RS11935 0.19 -0.2 2,536,111 + ABZR87_RS11935 0.19 -0.1 2,536,111 + ABZR87_RS11935 0.19 -0.8 2,536,111 + ABZR87_RS11935 0.19 -0.2 2,536,111 + ABZR87_RS11935 0.19 -0.7 2,536,111 + ABZR87_RS11935 0.19 +0.3 2,536,161 + ABZR87_RS11935 0.24 +0.2 2,536,161 + ABZR87_RS11935 0.24 +0.1 2,536,161 + ABZR87_RS11935 0.24 -0.3 2,536,161 + ABZR87_RS11935 0.24 -0.8 2,536,162 - ABZR87_RS11935 0.25 -0.3 2,536,162 - ABZR87_RS11935 0.25 +0.1 2,536,162 - ABZR87_RS11935 0.25 +0.7 2,536,204 + ABZR87_RS11935 0.29 +0.3 2,536,205 - ABZR87_RS11935 0.29 +0.7 2,536,205 - ABZR87_RS11935 0.29 -0.4 2,536,205 - ABZR87_RS11935 0.29 +0.0 2,536,237 + ABZR87_RS11935 0.33 -0.2 2,536,237 + ABZR87_RS11935 0.33 +0.4 2,536,238 - ABZR87_RS11935 0.33 -0.2 2,536,238 - ABZR87_RS11935 0.33 -0.2
Or see this region's nucleotide sequence