Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS09815 and ABZR87_RS09820 are separated by 131 nucleotides ABZR87_RS09820 and ABZR87_RS09825 are separated by 45 nucleotides ABZR87_RS09825 and ABZR87_RS09830 are separated by 9 nucleotides
ABZR87_RS09815: ABZR87_RS09815 - PLP-dependent aminotransferase family protein, at 2,086,065 to 2,087,255
_RS09815
ABZR87_RS09820: ABZR87_RS09820 - RidA family protein, at 2,087,387 to 2,087,857
_RS09820
ABZR87_RS09825: ABZR87_RS09825 - DMT family transporter, at 2,087,903 to 2,088,841
_RS09825
ABZR87_RS09830: ABZR87_RS09830 - alanyl-tRNA editing protein, at 2,088,851 to 2,089,570
_RS09830
Position (kb)
2087
2088 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2086.441 kb on + strand, within ABZR87_RS09815 at 2086.514 kb on + strand, within ABZR87_RS09815 at 2086.514 kb on + strand, within ABZR87_RS09815 at 2086.515 kb on - strand, within ABZR87_RS09815 at 2086.515 kb on - strand, within ABZR87_RS09815 at 2086.535 kb on - strand, within ABZR87_RS09815 at 2086.582 kb on + strand, within ABZR87_RS09815 at 2086.582 kb on + strand, within ABZR87_RS09815 at 2086.582 kb on + strand, within ABZR87_RS09815 at 2086.582 kb on + strand, within ABZR87_RS09815 at 2086.583 kb on - strand, within ABZR87_RS09815 at 2086.583 kb on - strand, within ABZR87_RS09815 at 2086.583 kb on - strand, within ABZR87_RS09815 at 2086.636 kb on + strand, within ABZR87_RS09815 at 2086.637 kb on - strand, within ABZR87_RS09815 at 2086.766 kb on - strand, within ABZR87_RS09815 at 2086.766 kb on - strand, within ABZR87_RS09815 at 2086.844 kb on + strand, within ABZR87_RS09815 at 2086.844 kb on + strand, within ABZR87_RS09815 at 2086.844 kb on + strand, within ABZR87_RS09815 at 2086.844 kb on + strand, within ABZR87_RS09815 at 2086.844 kb on + strand, within ABZR87_RS09815 at 2086.845 kb on - strand, within ABZR87_RS09815 at 2086.845 kb on - strand, within ABZR87_RS09815 at 2086.845 kb on - strand, within ABZR87_RS09815 at 2086.845 kb on - strand, within ABZR87_RS09815 at 2086.845 kb on - strand, within ABZR87_RS09815 at 2086.845 kb on - strand, within ABZR87_RS09815 at 2086.846 kb on + strand, within ABZR87_RS09815 at 2086.847 kb on - strand, within ABZR87_RS09815 at 2086.847 kb on - strand, within ABZR87_RS09815 at 2086.847 kb on - strand, within ABZR87_RS09815 at 2086.888 kb on + strand, within ABZR87_RS09815 at 2086.888 kb on + strand, within ABZR87_RS09815 at 2086.888 kb on + strand, within ABZR87_RS09815 at 2086.889 kb on - strand, within ABZR87_RS09815 at 2087.053 kb on + strand, within ABZR87_RS09815 at 2087.053 kb on + strand, within ABZR87_RS09815 at 2087.053 kb on + strand, within ABZR87_RS09815 at 2087.054 kb on - strand, within ABZR87_RS09815 at 2087.237 kb on + strand at 2087.238 kb on - strand at 2087.238 kb on - strand at 2087.238 kb on - strand at 2087.238 kb on - strand at 2087.266 kb on + strand at 2087.266 kb on + strand at 2087.267 kb on - strand at 2087.267 kb on - strand at 2087.323 kb on + strand at 2087.343 kb on + strand at 2087.343 kb on + strand at 2087.343 kb on + strand at 2087.775 kb on + strand, within ABZR87_RS09820 at 2087.775 kb on + strand, within ABZR87_RS09820 at 2087.776 kb on - strand, within ABZR87_RS09820 at 2087.776 kb on - strand, within ABZR87_RS09820 at 2087.871 kb on + strand at 2087.871 kb on + strand at 2087.871 kb on + strand at 2087.871 kb on + strand at 2087.872 kb on - strand at 2087.872 kb on - strand at 2087.872 kb on - strand at 2087.905 kb on - strand at 2088.041 kb on + strand, within ABZR87_RS09825 at 2088.041 kb on + strand, within ABZR87_RS09825 at 2088.041 kb on + strand, within ABZR87_RS09825 at 2088.042 kb on - strand, within ABZR87_RS09825 at 2088.084 kb on + strand, within ABZR87_RS09825 at 2088.085 kb on - strand, within ABZR87_RS09825 at 2088.122 kb on + strand, within ABZR87_RS09825 at 2088.122 kb on + strand, within ABZR87_RS09825 at 2088.123 kb on - strand, within ABZR87_RS09825 at 2088.126 kb on + strand, within ABZR87_RS09825 at 2088.126 kb on + strand, within ABZR87_RS09825 at 2088.126 kb on + strand, within ABZR87_RS09825 at 2088.127 kb on - strand, within ABZR87_RS09825 at 2088.127 kb on - strand, within ABZR87_RS09825 at 2088.127 kb on - strand, within ABZR87_RS09825 at 2088.127 kb on - strand, within ABZR87_RS09825 at 2088.127 kb on - strand, within ABZR87_RS09825 at 2088.127 kb on - strand, within ABZR87_RS09825 at 2088.127 kb on - strand, within ABZR87_RS09825 at 2088.127 kb on - strand, within ABZR87_RS09825 at 2088.127 kb on - strand, within ABZR87_RS09825
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 2,086,441 + ABZR87_RS09815 0.32 +0.2 2,086,514 + ABZR87_RS09815 0.38 +1.0 2,086,514 + ABZR87_RS09815 0.38 +0.8 2,086,515 - ABZR87_RS09815 0.38 -1.1 2,086,515 - ABZR87_RS09815 0.38 +0.4 2,086,535 - ABZR87_RS09815 0.39 -0.0 2,086,582 + ABZR87_RS09815 0.43 -0.5 2,086,582 + ABZR87_RS09815 0.43 +2.0 2,086,582 + ABZR87_RS09815 0.43 -0.5 2,086,582 + ABZR87_RS09815 0.43 -0.2 2,086,583 - ABZR87_RS09815 0.43 +0.2 2,086,583 - ABZR87_RS09815 0.43 -0.1 2,086,583 - ABZR87_RS09815 0.43 +0.0 2,086,636 + ABZR87_RS09815 0.48 -0.1 2,086,637 - ABZR87_RS09815 0.48 -0.2 2,086,766 - ABZR87_RS09815 0.59 +0.7 2,086,766 - ABZR87_RS09815 0.59 -0.0 2,086,844 + ABZR87_RS09815 0.65 -0.5 2,086,844 + ABZR87_RS09815 0.65 +0.7 2,086,844 + ABZR87_RS09815 0.65 -0.3 2,086,844 + ABZR87_RS09815 0.65 -0.2 2,086,844 + ABZR87_RS09815 0.65 +0.2 2,086,845 - ABZR87_RS09815 0.65 +0.5 2,086,845 - ABZR87_RS09815 0.65 +0.4 2,086,845 - ABZR87_RS09815 0.65 +0.2 2,086,845 - ABZR87_RS09815 0.65 +0.1 2,086,845 - ABZR87_RS09815 0.65 +0.6 2,086,845 - ABZR87_RS09815 0.65 -0.8 2,086,846 + ABZR87_RS09815 0.66 -1.5 2,086,847 - ABZR87_RS09815 0.66 +0.6 2,086,847 - ABZR87_RS09815 0.66 +0.1 2,086,847 - ABZR87_RS09815 0.66 +0.0 2,086,888 + ABZR87_RS09815 0.69 +0.6 2,086,888 + ABZR87_RS09815 0.69 +0.2 2,086,888 + ABZR87_RS09815 0.69 -0.8 2,086,889 - ABZR87_RS09815 0.69 -0.5 2,087,053 + ABZR87_RS09815 0.83 +1.1 2,087,053 + ABZR87_RS09815 0.83 +0.3 2,087,053 + ABZR87_RS09815 0.83 -0.3 2,087,054 - ABZR87_RS09815 0.83 -1.4 2,087,237 + +0.2 2,087,238 - -0.7 2,087,238 - -0.6 2,087,238 - +1.6 2,087,238 - +0.0 2,087,266 + +1.1 2,087,266 + -0.4 2,087,267 - +0.1 2,087,267 - -0.8 2,087,323 + -0.4 2,087,343 + +0.5 2,087,343 + +0.3 2,087,343 + -1.9 2,087,775 + ABZR87_RS09820 0.82 -0.2 2,087,775 + ABZR87_RS09820 0.82 +0.0 2,087,776 - ABZR87_RS09820 0.83 -1.0 2,087,776 - ABZR87_RS09820 0.83 -1.5 2,087,871 + -0.8 2,087,871 + -0.5 2,087,871 + -0.1 2,087,871 + -0.2 2,087,872 - +0.3 2,087,872 - -1.3 2,087,872 - -1.8 2,087,905 - +0.1 2,088,041 + ABZR87_RS09825 0.15 -0.4 2,088,041 + ABZR87_RS09825 0.15 +0.5 2,088,041 + ABZR87_RS09825 0.15 -0.3 2,088,042 - ABZR87_RS09825 0.15 -0.1 2,088,084 + ABZR87_RS09825 0.19 -1.0 2,088,085 - ABZR87_RS09825 0.19 -0.7 2,088,122 + ABZR87_RS09825 0.23 -0.1 2,088,122 + ABZR87_RS09825 0.23 -0.5 2,088,123 - ABZR87_RS09825 0.23 +0.6 2,088,126 + ABZR87_RS09825 0.24 -0.6 2,088,126 + ABZR87_RS09825 0.24 -0.7 2,088,126 + ABZR87_RS09825 0.24 -0.0 2,088,127 - ABZR87_RS09825 0.24 -0.9 2,088,127 - ABZR87_RS09825 0.24 +0.6 2,088,127 - ABZR87_RS09825 0.24 +0.2 2,088,127 - ABZR87_RS09825 0.24 +0.2 2,088,127 - ABZR87_RS09825 0.24 -0.4 2,088,127 - ABZR87_RS09825 0.24 +0.6 2,088,127 - ABZR87_RS09825 0.24 +0.3 2,088,127 - ABZR87_RS09825 0.24 +0.2 2,088,127 - ABZR87_RS09825 0.24 +0.1
Or see this region's nucleotide sequence