Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS09585 and ABZR87_RS09590 are separated by 126 nucleotides ABZR87_RS09590 and ABZR87_RS09595 are separated by 193 nucleotides ABZR87_RS09595 and ABZR87_RS09600 are separated by 145 nucleotides ABZR87_RS09600 and ABZR87_RS09605 are separated by 133 nucleotides
ABZR87_RS09585: ABZR87_RS09585 - hypothetical protein, at 2,035,866 to 2,036,039
_RS09585
ABZR87_RS09590: ABZR87_RS09590 - hypothetical protein, at 2,036,166 to 2,036,555
_RS09590
ABZR87_RS09595: ABZR87_RS09595 - PQQ-dependent sugar dehydrogenase, at 2,036,749 to 2,037,822
_RS09595
ABZR87_RS09600: ABZR87_RS09600 - 30S ribosomal protein S16, at 2,037,968 to 2,038,222
_RS09600
ABZR87_RS09605: ABZR87_RS09605 - ribosome maturation factor RimM, at 2,038,356 to 2,038,907
_RS09605
Position (kb)
2036
2037
2038 Strain fitness (log2 ratio)
-2
-1
0
1 at 2035.774 kb on + strand at 2035.774 kb on + strand at 2035.774 kb on + strand at 2035.775 kb on - strand at 2035.837 kb on + strand at 2035.867 kb on + strand at 2035.867 kb on + strand at 2035.867 kb on + strand at 2035.868 kb on - strand at 2035.868 kb on - strand at 2035.951 kb on + strand, within ABZR87_RS09585 at 2036.007 kb on - strand, within ABZR87_RS09585 at 2036.096 kb on + strand at 2036.096 kb on + strand at 2036.096 kb on + strand at 2036.097 kb on - strand at 2036.107 kb on + strand at 2036.107 kb on + strand at 2036.107 kb on + strand at 2036.107 kb on + strand at 2036.108 kb on - strand at 2036.108 kb on - strand at 2036.559 kb on + strand at 2036.559 kb on + strand at 2036.559 kb on + strand at 2036.559 kb on + strand at 2036.559 kb on + strand at 2036.559 kb on + strand at 2036.560 kb on - strand at 2036.560 kb on - strand at 2036.560 kb on - strand at 2036.560 kb on - strand at 2036.560 kb on - strand at 2036.560 kb on - strand at 2036.654 kb on + strand at 2036.654 kb on + strand at 2036.654 kb on + strand at 2036.654 kb on + strand at 2036.654 kb on + strand at 2036.655 kb on - strand at 2036.655 kb on - strand at 2036.655 kb on - strand at 2036.655 kb on - strand at 2036.655 kb on - strand at 2036.655 kb on - strand at 2036.655 kb on - strand at 2036.699 kb on + strand at 2036.699 kb on + strand at 2036.699 kb on + strand at 2036.699 kb on + strand at 2036.699 kb on + strand at 2036.700 kb on - strand at 2036.700 kb on - strand at 2036.700 kb on - strand at 2036.700 kb on - strand at 2036.743 kb on + strand at 2036.744 kb on - strand at 2036.744 kb on - strand at 2036.763 kb on - strand at 2036.774 kb on + strand at 2036.774 kb on + strand at 2036.775 kb on - strand at 2036.775 kb on - strand at 2036.775 kb on - strand at 2036.775 kb on - strand at 2036.775 kb on - strand at 2036.920 kb on + strand, within ABZR87_RS09595 at 2036.920 kb on + strand, within ABZR87_RS09595 at 2036.920 kb on + strand, within ABZR87_RS09595 at 2036.920 kb on + strand, within ABZR87_RS09595 at 2036.921 kb on - strand, within ABZR87_RS09595 at 2036.921 kb on - strand, within ABZR87_RS09595 at 2037.027 kb on - strand, within ABZR87_RS09595 at 2037.083 kb on + strand, within ABZR87_RS09595 at 2037.084 kb on - strand, within ABZR87_RS09595 at 2037.084 kb on - strand, within ABZR87_RS09595 at 2037.398 kb on + strand, within ABZR87_RS09595 at 2037.398 kb on + strand, within ABZR87_RS09595 at 2037.398 kb on + strand, within ABZR87_RS09595 at 2037.398 kb on + strand, within ABZR87_RS09595 at 2037.398 kb on + strand, within ABZR87_RS09595 at 2037.398 kb on + strand, within ABZR87_RS09595 at 2037.398 kb on + strand, within ABZR87_RS09595 at 2037.398 kb on + strand, within ABZR87_RS09595 at 2037.399 kb on - strand, within ABZR87_RS09595 at 2037.399 kb on - strand, within ABZR87_RS09595 at 2037.399 kb on - strand, within ABZR87_RS09595 at 2037.399 kb on - strand, within ABZR87_RS09595 at 2037.511 kb on - strand, within ABZR87_RS09595 at 2037.548 kb on + strand, within ABZR87_RS09595 at 2037.548 kb on + strand, within ABZR87_RS09595 at 2037.549 kb on - strand, within ABZR87_RS09595 at 2037.549 kb on - strand, within ABZR87_RS09595 at 2037.644 kb on + strand, within ABZR87_RS09595 at 2037.644 kb on + strand, within ABZR87_RS09595 at 2037.671 kb on + strand, within ABZR87_RS09595 at 2037.672 kb on - strand, within ABZR87_RS09595 at 2037.672 kb on - strand, within ABZR87_RS09595 at 2037.672 kb on - strand, within ABZR87_RS09595 at 2037.754 kb on + strand at 2037.835 kb on + strand at 2037.835 kb on + strand at 2037.839 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 2,035,774 + +0.2 2,035,774 + +0.6 2,035,774 + -1.0 2,035,775 - +0.1 2,035,837 + -1.2 2,035,867 + +0.7 2,035,867 + -1.4 2,035,867 + -0.7 2,035,868 - -0.3 2,035,868 - -0.0 2,035,951 + ABZR87_RS09585 0.49 +1.0 2,036,007 - ABZR87_RS09585 0.81 -0.1 2,036,096 + +0.4 2,036,096 + +0.4 2,036,096 + -0.8 2,036,097 - -0.5 2,036,107 + +1.4 2,036,107 + -0.0 2,036,107 + +0.1 2,036,107 + +0.2 2,036,108 - -0.2 2,036,108 - +0.8 2,036,559 + +0.0 2,036,559 + -0.4 2,036,559 + -0.3 2,036,559 + -1.4 2,036,559 + +0.8 2,036,559 + -0.2 2,036,560 - +0.5 2,036,560 - -0.3 2,036,560 - -0.6 2,036,560 - -1.3 2,036,560 - +0.1 2,036,560 - +0.5 2,036,654 + +1.0 2,036,654 + +0.1 2,036,654 + +0.2 2,036,654 + -0.7 2,036,654 + -1.9 2,036,655 - +0.2 2,036,655 - +0.5 2,036,655 - +0.4 2,036,655 - +0.6 2,036,655 - -0.7 2,036,655 - -0.3 2,036,655 - -0.2 2,036,699 + -1.0 2,036,699 + -0.2 2,036,699 + -0.9 2,036,699 + -0.1 2,036,699 + -0.2 2,036,700 - -1.4 2,036,700 - +0.6 2,036,700 - -0.9 2,036,700 - -0.0 2,036,743 + -0.6 2,036,744 - -0.3 2,036,744 - +0.1 2,036,763 - +1.3 2,036,774 + +0.6 2,036,774 + -0.0 2,036,775 - +0.1 2,036,775 - +0.1 2,036,775 - +0.7 2,036,775 - +1.0 2,036,775 - -0.5 2,036,920 + ABZR87_RS09595 0.16 -0.2 2,036,920 + ABZR87_RS09595 0.16 +0.4 2,036,920 + ABZR87_RS09595 0.16 -1.8 2,036,920 + ABZR87_RS09595 0.16 +0.3 2,036,921 - ABZR87_RS09595 0.16 +0.6 2,036,921 - ABZR87_RS09595 0.16 +0.2 2,037,027 - ABZR87_RS09595 0.26 +0.0 2,037,083 + ABZR87_RS09595 0.31 -0.1 2,037,084 - ABZR87_RS09595 0.31 +0.8 2,037,084 - ABZR87_RS09595 0.31 -0.3 2,037,398 + ABZR87_RS09595 0.60 -0.0 2,037,398 + ABZR87_RS09595 0.60 -0.3 2,037,398 + ABZR87_RS09595 0.60 -0.3 2,037,398 + ABZR87_RS09595 0.60 -0.1 2,037,398 + ABZR87_RS09595 0.60 -0.3 2,037,398 + ABZR87_RS09595 0.60 -0.3 2,037,398 + ABZR87_RS09595 0.60 -0.1 2,037,398 + ABZR87_RS09595 0.60 -0.8 2,037,399 - ABZR87_RS09595 0.61 +0.6 2,037,399 - ABZR87_RS09595 0.61 -0.3 2,037,399 - ABZR87_RS09595 0.61 +0.1 2,037,399 - ABZR87_RS09595 0.61 +0.2 2,037,511 - ABZR87_RS09595 0.71 +0.7 2,037,548 + ABZR87_RS09595 0.74 -0.3 2,037,548 + ABZR87_RS09595 0.74 +1.3 2,037,549 - ABZR87_RS09595 0.74 -0.1 2,037,549 - ABZR87_RS09595 0.74 +0.7 2,037,644 + ABZR87_RS09595 0.83 -0.3 2,037,644 + ABZR87_RS09595 0.83 -0.1 2,037,671 + ABZR87_RS09595 0.86 -0.2 2,037,672 - ABZR87_RS09595 0.86 -1.8 2,037,672 - ABZR87_RS09595 0.86 +0.0 2,037,672 - ABZR87_RS09595 0.86 -0.9 2,037,754 + +0.1 2,037,835 + +0.2 2,037,835 + -0.6 2,037,839 + -0.9
Or see this region's nucleotide sequence