Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS08335 and ABZR87_RS08340 are separated by 69 nucleotides ABZR87_RS08340 and ABZR87_RS08345 are separated by 48 nucleotides ABZR87_RS08345 and ABZR87_RS08350 are separated by 560 nucleotides
ABZR87_RS08335: ABZR87_RS08335 - MFS transporter, at 1,772,195 to 1,773,490
_RS08335
ABZR87_RS08340: ABZR87_RS08340 - substrate-binding domain-containing protein, at 1,773,560 to 1,774,342
_RS08340
ABZR87_RS08345: ABZR87_RS08345 - LysR family transcriptional regulator, at 1,774,391 to 1,775,308
_RS08345
ABZR87_RS08350: ABZR87_RS08350 - hypothetical protein, at 1,775,869 to 1,777,131
_RS08350
Position (kb)
1774
1775
1776 Strain fitness (log2 ratio)
-1
0
1
2 at 1773.452 kb on + strand at 1773.523 kb on + strand at 1773.524 kb on - strand at 1773.529 kb on + strand at 1773.529 kb on + strand at 1773.530 kb on - strand at 1773.677 kb on + strand, within ABZR87_RS08340 at 1773.678 kb on - strand, within ABZR87_RS08340 at 1773.678 kb on - strand, within ABZR87_RS08340 at 1773.679 kb on + strand, within ABZR87_RS08340 at 1773.679 kb on + strand, within ABZR87_RS08340 at 1773.679 kb on + strand, within ABZR87_RS08340 at 1773.680 kb on - strand, within ABZR87_RS08340 at 1773.680 kb on - strand, within ABZR87_RS08340 at 1773.680 kb on - strand, within ABZR87_RS08340 at 1773.768 kb on + strand, within ABZR87_RS08340 at 1773.931 kb on + strand, within ABZR87_RS08340 at 1774.010 kb on + strand, within ABZR87_RS08340 at 1774.010 kb on + strand, within ABZR87_RS08340 at 1774.010 kb on + strand, within ABZR87_RS08340 at 1774.010 kb on + strand, within ABZR87_RS08340 at 1774.011 kb on - strand, within ABZR87_RS08340 at 1774.011 kb on - strand, within ABZR87_RS08340 at 1774.084 kb on + strand, within ABZR87_RS08340 at 1774.118 kb on + strand, within ABZR87_RS08340 at 1774.274 kb on + strand at 1774.274 kb on + strand at 1774.275 kb on - strand at 1774.725 kb on + strand, within ABZR87_RS08345 at 1774.725 kb on + strand, within ABZR87_RS08345 at 1774.725 kb on + strand, within ABZR87_RS08345 at 1774.726 kb on - strand, within ABZR87_RS08345 at 1774.726 kb on - strand, within ABZR87_RS08345 at 1774.726 kb on - strand, within ABZR87_RS08345 at 1774.726 kb on - strand, within ABZR87_RS08345 at 1774.726 kb on - strand, within ABZR87_RS08345 at 1774.737 kb on + strand, within ABZR87_RS08345 at 1774.901 kb on + strand, within ABZR87_RS08345 at 1774.901 kb on + strand, within ABZR87_RS08345 at 1774.901 kb on + strand, within ABZR87_RS08345 at 1774.959 kb on + strand, within ABZR87_RS08345 at 1774.986 kb on + strand, within ABZR87_RS08345 at 1774.986 kb on + strand, within ABZR87_RS08345 at 1774.987 kb on - strand, within ABZR87_RS08345 at 1774.989 kb on + strand, within ABZR87_RS08345 at 1774.989 kb on + strand, within ABZR87_RS08345 at 1774.989 kb on + strand, within ABZR87_RS08345 at 1775.352 kb on + strand at 1775.352 kb on + strand at 1775.353 kb on - strand at 1775.353 kb on - strand at 1775.353 kb on - strand at 1775.627 kb on + strand at 1775.627 kb on + strand at 1775.627 kb on + strand at 1775.628 kb on - strand at 1775.748 kb on + strand at 1775.749 kb on - strand at 1775.834 kb on + strand at 1775.834 kb on + strand at 1776.069 kb on + strand, within ABZR87_RS08350 at 1776.070 kb on - strand, within ABZR87_RS08350 at 1776.070 kb on - strand, within ABZR87_RS08350 at 1776.070 kb on - strand, within ABZR87_RS08350 at 1776.166 kb on - strand, within ABZR87_RS08350 at 1776.205 kb on + strand, within ABZR87_RS08350 at 1776.205 kb on + strand, within ABZR87_RS08350 at 1776.205 kb on + strand, within ABZR87_RS08350 at 1776.205 kb on + strand, within ABZR87_RS08350 at 1776.206 kb on - strand, within ABZR87_RS08350 at 1776.206 kb on - strand, within ABZR87_RS08350 at 1776.206 kb on - strand, within ABZR87_RS08350 at 1776.206 kb on - strand, within ABZR87_RS08350 at 1776.239 kb on - strand, within ABZR87_RS08350 at 1776.262 kb on + strand, within ABZR87_RS08350 at 1776.262 kb on + strand, within ABZR87_RS08350 at 1776.262 kb on + strand, within ABZR87_RS08350 at 1776.262 kb on + strand, within ABZR87_RS08350 at 1776.262 kb on + strand, within ABZR87_RS08350 at 1776.262 kb on + strand, within ABZR87_RS08350 at 1776.263 kb on - strand, within ABZR87_RS08350 at 1776.263 kb on - strand, within ABZR87_RS08350 at 1776.263 kb on - strand, within ABZR87_RS08350 at 1776.271 kb on + strand, within ABZR87_RS08350 at 1776.271 kb on + strand, within ABZR87_RS08350 at 1776.271 kb on + strand, within ABZR87_RS08350 at 1776.272 kb on - strand, within ABZR87_RS08350 at 1776.272 kb on - strand, within ABZR87_RS08350 at 1776.272 kb on - strand, within ABZR87_RS08350 at 1776.272 kb on - strand, within ABZR87_RS08350 at 1776.296 kb on - strand, within ABZR87_RS08350 at 1776.296 kb on - strand, within ABZR87_RS08350 at 1776.296 kb on - strand, within ABZR87_RS08350 at 1776.296 kb on - strand, within ABZR87_RS08350
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 1,773,452 + +0.2 1,773,523 + +0.4 1,773,524 - -0.2 1,773,529 + +0.9 1,773,529 + -1.0 1,773,530 - -0.6 1,773,677 + ABZR87_RS08340 0.15 -0.0 1,773,678 - ABZR87_RS08340 0.15 -0.5 1,773,678 - ABZR87_RS08340 0.15 +0.3 1,773,679 + ABZR87_RS08340 0.15 +0.3 1,773,679 + ABZR87_RS08340 0.15 -0.6 1,773,679 + ABZR87_RS08340 0.15 -0.5 1,773,680 - ABZR87_RS08340 0.15 -0.5 1,773,680 - ABZR87_RS08340 0.15 +0.5 1,773,680 - ABZR87_RS08340 0.15 -0.1 1,773,768 + ABZR87_RS08340 0.27 +0.0 1,773,931 + ABZR87_RS08340 0.47 +0.2 1,774,010 + ABZR87_RS08340 0.57 +0.0 1,774,010 + ABZR87_RS08340 0.57 -0.3 1,774,010 + ABZR87_RS08340 0.57 +0.1 1,774,010 + ABZR87_RS08340 0.57 -0.7 1,774,011 - ABZR87_RS08340 0.58 -0.2 1,774,011 - ABZR87_RS08340 0.58 +0.6 1,774,084 + ABZR87_RS08340 0.67 +0.1 1,774,118 + ABZR87_RS08340 0.71 -0.6 1,774,274 + +0.2 1,774,274 + -0.8 1,774,275 - +0.2 1,774,725 + ABZR87_RS08345 0.36 +0.1 1,774,725 + ABZR87_RS08345 0.36 +0.5 1,774,725 + ABZR87_RS08345 0.36 +0.7 1,774,726 - ABZR87_RS08345 0.36 -0.7 1,774,726 - ABZR87_RS08345 0.36 -0.0 1,774,726 - ABZR87_RS08345 0.36 +1.9 1,774,726 - ABZR87_RS08345 0.36 +1.3 1,774,726 - ABZR87_RS08345 0.36 +1.2 1,774,737 + ABZR87_RS08345 0.38 +0.0 1,774,901 + ABZR87_RS08345 0.56 +0.4 1,774,901 + ABZR87_RS08345 0.56 +0.6 1,774,901 + ABZR87_RS08345 0.56 +1.3 1,774,959 + ABZR87_RS08345 0.62 +0.2 1,774,986 + ABZR87_RS08345 0.65 -0.7 1,774,986 + ABZR87_RS08345 0.65 -0.1 1,774,987 - ABZR87_RS08345 0.65 -0.3 1,774,989 + ABZR87_RS08345 0.65 +1.0 1,774,989 + ABZR87_RS08345 0.65 -0.2 1,774,989 + ABZR87_RS08345 0.65 -0.2 1,775,352 + -0.1 1,775,352 + +0.3 1,775,353 - +0.7 1,775,353 - +0.2 1,775,353 - -0.4 1,775,627 + -0.0 1,775,627 + +0.3 1,775,627 + -0.0 1,775,628 - +0.6 1,775,748 + -0.1 1,775,749 - +1.2 1,775,834 + -0.9 1,775,834 + +1.2 1,776,069 + ABZR87_RS08350 0.16 +0.6 1,776,070 - ABZR87_RS08350 0.16 -0.4 1,776,070 - ABZR87_RS08350 0.16 -0.2 1,776,070 - ABZR87_RS08350 0.16 +0.1 1,776,166 - ABZR87_RS08350 0.24 +0.0 1,776,205 + ABZR87_RS08350 0.27 +0.4 1,776,205 + ABZR87_RS08350 0.27 +0.1 1,776,205 + ABZR87_RS08350 0.27 +0.3 1,776,205 + ABZR87_RS08350 0.27 +0.2 1,776,206 - ABZR87_RS08350 0.27 -0.4 1,776,206 - ABZR87_RS08350 0.27 -0.2 1,776,206 - ABZR87_RS08350 0.27 +0.7 1,776,206 - ABZR87_RS08350 0.27 -0.1 1,776,239 - ABZR87_RS08350 0.29 +0.0 1,776,262 + ABZR87_RS08350 0.31 +0.2 1,776,262 + ABZR87_RS08350 0.31 -1.0 1,776,262 + ABZR87_RS08350 0.31 +0.6 1,776,262 + ABZR87_RS08350 0.31 -0.9 1,776,262 + ABZR87_RS08350 0.31 -0.2 1,776,262 + ABZR87_RS08350 0.31 -1.7 1,776,263 - ABZR87_RS08350 0.31 +0.2 1,776,263 - ABZR87_RS08350 0.31 -1.5 1,776,263 - ABZR87_RS08350 0.31 +0.0 1,776,271 + ABZR87_RS08350 0.32 -0.9 1,776,271 + ABZR87_RS08350 0.32 -0.1 1,776,271 + ABZR87_RS08350 0.32 +0.9 1,776,272 - ABZR87_RS08350 0.32 +1.2 1,776,272 - ABZR87_RS08350 0.32 +0.3 1,776,272 - ABZR87_RS08350 0.32 +0.6 1,776,272 - ABZR87_RS08350 0.32 +0.2 1,776,296 - ABZR87_RS08350 0.34 +0.1 1,776,296 - ABZR87_RS08350 0.34 +0.2 1,776,296 - ABZR87_RS08350 0.34 +0.2 1,776,296 - ABZR87_RS08350 0.34 -1.4
Or see this region's nucleotide sequence